CN181984

Overview
NameCN181984
Unique NameCN181984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CLL4_ARATH (4-coumarate--CoA ligase-like 4 OS=Arabidopsis thaliana GN=4CLL4 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 8.461e-31
Identity = 65/146 (44.52%), Postives = 92/146 (63.01%), Query Frame = -2
Query:  134 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRIL 571
            EL ++   + +GY+ N+E T  TI+  GWL T                 +KELIKYKG+QV PAELEA+L+THP + DAAV+  PD+EAG+ P A VV    +  SE  ++DF++  VA YKK+R + F++ IPK+ SGK +R+ L
Sbjct:  397 ELWLKGPSISKGYFKNQEATNETINLEGWLKTGDLCYIDEDGFLFVVDRLKELIKYKGYQVPPAELEALLITHPDILDAAVIPFPDKEAGQYPMAYVVRKHESNLSEKQVIDFISKQVAPYKKIRKVSFINSIPKTASGKTLRKDL 542          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CLL6_ARATH (4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana GN=4CLL6 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.443e-30
Identity = 69/147 (46.94%), Postives = 95/147 (64.63%), Query Frame = -2
Query:  131 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571
            EL ++   VM+GY NN + T  +I ++ WL T                 IKE+IKYKGFQ+APA+LEA+L++HP + DAAV + P+EE GEIP A VV       SE+D++ +VAS VA Y+KVR +  V+ IPKS +GKI+R+ LK
Sbjct:  409 ELWIQGPGVMKGYLNNPKATQMSIVEDSWLRTGDIAYFDEDGYLFIVDRIKEIIKYKGFQIAPADLEAVLVSHPLIIDAAVTAAPNEECGEIPVAFVVRRQETTLSEEDVISYVASQVAPYRKVRKVVMVNSIPKSPTGKILRKELK 555          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: LUCI_LUCMI (Luciferin 4-monooxygenase OS=Luciola mingrelica PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.885e-30
Identity = 66/157 (42.04%), Postives = 96/157 (61.15%), Query Frame = -2
Query:  104 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVR-VLHFVDGIPKSHSGKIMRRILKDKMLEKMRK 571
            E+CV+   +M GY NN E T  TID+ GWLHT                 +K LIKYKG+QV PAELE++LL HP++ DA V  +PD +AGE+P A VVM      +E +I+D+V S V  +K++R  + FVD +PK  +GKI  +++++ + +   K
Sbjct:  391 EICVKGPSLMLGYSNNPEATRETIDEEGWLHTGDIGYYDEDEHFFIVDRLKSLIKYKGYQVPPAELESVLLQHPNIFDAGVAGVPDPDAGELPGAVVVMEKGKTMTEKEIVDYVNSQVVNHKRLRGGVRFVDEVPKGLTGKIDAKVIREILKKPQAK 547          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: LUCI_LUCCR (Luciferin 4-monooxygenase OS=Luciola cruciata PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.462e-30
Identity = 67/157 (42.68%), Postives = 96/157 (61.15%), Query Frame = -2
Query:  104 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVR-VLHFVDGIPKSHSGKIMRRILKDKMLEKMRK 571
            E+CV+   +M+GY NN E T   ID+ GWLHT                 +K LIKYKG+QV PAELE++LL HPS+ DA V  +PD  AGE+P A VV+      +E ++MD+VAS V+  K++R  + FVD +PK  +GKI  R +++ + + + K
Sbjct:  391 EVCVKGPMLMKGYVNNPEATKELIDEEGWLHTGDIGYYDEEKHFFIVDRLKSLIKYKGYQVPPAELESVLLQHPSIFDAGVAGVPDPVAGELPGAVVVLESGKNMTEKEVMDYVASQVSNAKRLRGGVRFVDEVPKGLTGKIDGRAIREILKKPVAK 547          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CLL3_ARATH (4-coumarate--CoA ligase-like 3 OS=Arabidopsis thaliana GN=4CLL3 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 2.462e-30
Identity = 64/146 (43.84%), Postives = 90/146 (61.64%), Query Frame = -2
Query:  134 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRIL 571
            EL ++   + +GY+ NEE T  TI+  GWL                   +KELIKYKG+QV PAELEA+L+ HP + DAAV+  PD EAG+ P A V   P +  SE +++DF+++ VA YKK+R + F+  IPK+ SGK +R+ L
Sbjct:  399 ELWLKGPSISKGYFGNEEATNETINLEGWLKLGDLCYIDEDGFLFVVDRLKELIKYKGYQVPPAELEALLIAHPHILDAAVIPFPDREAGQYPMAYVARKPESNLSEKEVIDFISNQVAPYKKIRKVAFISSIPKTASGKTLRKDL 544          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CLL7_ORYSJ (4-coumarate--CoA ligase-like 7 OS=Oryza sativa subsp. japonica GN=4CLL7 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.084e-29
Identity = 71/146 (48.63%), Postives = 87/146 (59.59%), Query Frame = -2
Query:  134 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRIL 571
            EL VR   VM GY  + E  A T +  GWL T                 +KELIKYK +QV PAELE +L + P + DAAV+  P EEAG+IP A VV  P +K +E ++M  VA  VA YKK+R + FVD IPKS SGKI+RR L
Sbjct:  401 ELWVRGPAVMTGYVGDNEANATTFNSEGWLKTGDLCYIDQDGFLFVVDRLKELIKYKAYQVPPAELELVLHSLPQIVDAAVMPYPHEEAGQIPVALVVKQPGSKLTEAEVMYNVAKQVAPYKKIRKVLFVDSIPKSPSGKILRREL 546          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CLL8_ARATH (4-coumarate--CoA ligase-like 8 OS=Arabidopsis thaliana GN=4CLL8 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 2.722e-29
Identity = 65/146 (44.52%), Postives = 88/146 (60.27%), Query Frame = -2
Query:  134 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRIL 571
            EL ++   + +GY+ NEEE    I   GWL T                 +KELIKYKG+QV PAELEA+LL HP + DAAV+  PD+EAG+ P A V   P +   E  ++DF++  VA YKK+R + F+D IPK+ SGK +R+ L
Sbjct:  400 ELWLKGPSIAKGYFRNEEEI---ITSEGWLKTGDLCYIDNDGFLFIVDRLKELIKYKGYQVPPAELEALLLNHPDILDAAVIPFPDKEAGQFPMAYVARKPESNLCEKKVIDFISKQVAPYKKIRKVAFIDSIPKTPSGKTLRKDL 542          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: LUCI_LUCLA (Luciferin 4-monooxygenase OS=Luciola lateralis PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.643e-29
Identity = 70/159 (44.03%), Postives = 97/159 (61.01%), Query Frame = -2
Query:  110 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVR-VLHFVDGIPKSHSGKI----MRRILKDKMLEKM 571
            E+CV+   +M+GY +N E T   ID+ GWLHT                 +K LIKYKG+QV PAELE++LL HP++ DA V  +PD  AGE+P A VV+      +E ++MD+VAS V+  K++R  + FVD +PK  +GKI    +R ILK K + KM
Sbjct:  391 EVCVKGPMLMKGYVDNPEATREIIDEEGWLHTGDIGYYDEEKHFFIVDRLKSLIKYKGYQVPPAELESVLLQHPNIFDAGVAGVPDPIAGELPGAVVVLEKGKSMTEKEVMDYVASQVSNAKRLRGGVRFVDEVPKGLTGKIDGKAIREILK-KPVAKM 548          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: LUCI_PHOPE (Luciferin 4-monooxygenase OS=Photuris pennsylvanica PE=2 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 1.764e-28
Identity = 69/154 (44.81%), Postives = 95/154 (61.69%), Query Frame = -2
Query:  113 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVR-VLHFVDGIPKSHSGKIMRRILKDKMLEK 571
            EL  +   +M+ YYNNEE T   I+K+GWL +                 +K LIKYKG+QVAPAE+E ILL HP + DA V  +PDE AGE+PAA VV+      +E  + +FV+S V+T K +R  + F+D IPK  +GKI R++L+ +M EK
Sbjct:  388 ELYFKGDMIMKSYYNNEEATKAIINKDGWLRSGDIAYYDNDGHFYIVDRLKSLIKYKGYQVAPAEIEGILLQHPYIVDAGVTGIPDEAAGELPAAGVVVQTGKYLNEQIVQNFVSSQVSTAKWLRGGVKFLDEIPKGSTGKIDRKVLR-QMFEK 540          
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL3_DICDI (Probable 4-coumarate--CoA ligase 3 OS=Dictyostelium discoideum GN=4cl3 PE=3 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 3.009e-28
Identity = 66/149 (44.30%), Postives = 89/149 (59.73%), Query Frame = -2
Query:  128 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVR-VLHFVDGIPKSHSGKIMRRILKD 571
            E+C++   VM GYYNNE+ T   IDK+G+L T                  KELIK KGFQV PAELEA+LL+HP V DA VV L   + GE+P   VV+  N   +E +++D+    +A YK  R  + F+  IPKS +GK++R+ LKD
Sbjct:  397 EICIKGPNVMLGYYNNEKATNEVIDKDGFLKTGDIGYVDEDGYFFIIDRSKELIKCKGFQVPPAELEALLLSHPKVADACVVGLSKGDMGEVPRGFVVIKQNESLTEKELLDWAHPKIANYKHFRGGIFFIPAIPKSATGKLLRKNLKD 545          
The following BLAST results are available for this feature:
BLAST of CN181984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
4CLL4_ARATH8.461e-3144.524-coumarate--CoA ligase-like 4 OS=Arabidopsis thal... [more]
4CLL6_ARATH1.443e-3046.944-coumarate--CoA ligase-like 6 OS=Arabidopsis thal... [more]
LUCI_LUCMI1.885e-3042.04Luciferin 4-monooxygenase OS=Luciola mingrelica PE... [more]
LUCI_LUCCR2.462e-3042.68Luciferin 4-monooxygenase OS=Luciola cruciata PE=1... [more]
4CLL3_ARATH2.462e-3043.844-coumarate--CoA ligase-like 3 OS=Arabidopsis thal... [more]
4CLL7_ORYSJ2.084e-2948.634-coumarate--CoA ligase-like 7 OS=Oryza sativa sub... [more]
4CLL8_ARATH2.722e-2944.524-coumarate--CoA ligase-like 8 OS=Arabidopsis thal... [more]
LUCI_LUCLA4.643e-2944.03Luciferin 4-monooxygenase OS=Luciola lateralis PE=... [more]
LUCI_PHOPE1.764e-2844.81Luciferin 4-monooxygenase OS=Photuris pennsylvanic... [more]
4CL3_DICDI3.009e-2844.30Probable 4-coumarate--CoA ligase 3 OS=Dictyosteliu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001M08_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001M08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181984 ID=CN181984; Name=CN181984; organism=Citrus sinensis; type=EST; length=572bp
TATCGAAGGACACAAAGTTAACACATAGAGCGATGAATGTTAAGCATCCA
ACAACAAGTGATCAAAGGGGAGAAAATTAATAAGCCGGCTGCGTCAGATT
TCACTTTCGCATCTTCTCAAGCATCTTGTCTTTGAGAATCCTTCTCATTA
TTTTCCCAGAGTGAGACTTTGGGATGCCATCCACAAAGTGCAAGACTCTC
ACTTTCTTATAAGTTGCAACGTTGGAGGCCACGAAGTCCATAATATCATC
TTCACTTTCTTTGGCATTTGGGTTCATCACGACACAGGCGGCTGGGATTT
CCCCCGCCTCTTCATCAGGCAGCGACACAACCGCAGCATCTTCAACCGAG
GGATGAGTTAAAAGGATGGCTTCAAGCTCAGCCGGGGCTACTTGAAACCC
CTTGTACTTGATTAACTCTTTGATGCGATCAACAATAAAAATATCTCCGT
CATCATCTATGTATCCAATGTCACCGGTATGTAGCCACCCATTCTTGTCA
ATGGTCCTTGCAGTTTCCTCTTCATTGTTATAGTAACCTTGCATTACACA
TTGACTTCTGACGCAAAGCTCA
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