CN181984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL1_DICDI (Probable 4-coumarate--CoA ligase 1 OS=Dictyostelium discoideum GN=4cl1 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.009e-28 Identity = 66/149 (44.30%), Postives = 89/149 (59.73%), Query Frame = -2 Query: 128 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVR-VLHFVDGIPKSHSGKIMRRILKD 571 E+C++ VM GYYNNE+ T IDK+G+L T KELIK KGFQV PAELEA+LL+HP V DA VV L + GE+P VV+ N +E +++D+ +A YK R + F+ IPKS +GK++R+ LKD Sbjct: 397 EICIKGPNVMLGYYNNEKATNEVIDKDGFLKTGDIGYVDEDGYYFIVDRSKELIKCKGFQVPPAELEALLLSHPKVADACVVGLSKGDMGEVPRGFVVIKQNESLTEKELLDWAHPKIANYKHFRGGIFFIPAIPKSATGKLLRKNLKD 545
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CL2_DICDI (Probable 4-coumarate--CoA ligase 2 OS=Dictyostelium discoideum GN=4cl2 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 8.756e-28 Identity = 65/149 (43.62%), Postives = 88/149 (59.06%), Query Frame = -2 Query: 128 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVR-VLHFVDGIPKSHSGKIMRRILKD 571 E+C++ VM GYYNNE+ T IDK+G+ T KELIK KGFQV PAELEA+LL+HP V DA VV L + GE+P VV+ N +E +++D+ +A YK R + F+ IPKS +GK++R+ LKD Sbjct: 397 EICIKGPNVMLGYYNNEKATNEVIDKDGFFKTGDIGYVDEDGYYFIVDRSKELIKCKGFQVPPAELEALLLSHPKVADACVVGLSKGDMGEVPRGFVVIKQNESLTEKELLDWAHPKIANYKHFRGGIFFIPAIPKSATGKLLRKNLKD 545
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CLL8_ORYSJ (Putative 4-coumarate--CoA ligase-like 8 OS=Oryza sativa subsp. japonica GN=4CLL8 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.493e-27 Identity = 73/160 (45.62%), Postives = 92/160 (57.50%), Query Frame = -2 Query: 128 ELCVRSQCVMQGYYNNEEETAR-------TIDKNG----WLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKE-SEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKD 571 EL VR M+GY NNEE TA ++ +G WL T +KELIK +QVAPAELE +L THP + DAAV PD+EAGEIP A VV + ED+++ FV + VA YKK+R + FVD IP+S SGKI+RR LK+ Sbjct: 438 ELWVRGPSTMRGYLNNEEATALALVAAAGSVSVSGGGERWLRTGDLCYVDSRGLVYVVDRVKELIKCNAYQVAPAELEDVLATHPDIHDAAVAPYPDKEAGEIPMAYVVKKQGSGHLQEDEVISFVQNKVAPYKKIRKVVFVDSIPRSPSGKILRRQLKN 597
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: 4CLL3_ORYSJ (4-coumarate--CoA ligase-like 3 OS=Oryza sativa subsp. japonica GN=4CLL3 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.264e-26 Identity = 61/148 (41.22%), Postives = 90/148 (60.81%), Query Frame = -2 Query: 128 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKD 571 EL + +M+GY +++++ K+GWL T +K+ IKYKGFQ+AP +LE +L+ HP + D AV S DEEAGEIP A VV + S +M++VA VA YK+VR + FV+ IPKS +GK++RR+L++ Sbjct: 428 ELWLHGPGIMKGYLSDDDDACTR--KDGWLRTGDIAYFDLDGYLYIVGRLKDTIKYKGFQIAPGDLEEVLIHHPEILDVAVTSAEDEEAGEIPVAFVVRRSGSNLSCKQVMEYVAKQVAPYKRVRKVVFVEAIPKSPAGKVLRRLLRN 573
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: LCFB_BACSU (Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis GN=lcfB PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 2.553e-19 Identity = 52/148 (35.14%), Postives = 82/148 (55.41%), Query Frame = -2 Query: 128 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKD 571 EL V+ VM+GYY ET + K+GWL+T K++I G+ V P E+E +L +HP V++A V+ +PD ++GE VV + +E+DIM ++A YK+ + F+D IPK+ +GK++RR L+D Sbjct: 364 ELIVKGPNVMKGYYKMPMETEHAL-KDGWLYTGDLARRDEDGYFYIVDRKKDMIIVGGYNVYPREVEEVLYSHPDVKEAVVIGVPDPQSGEAVKGYVVPK-RSGVTEEDIMQHCEKHLAKYKRPAAITFLDDIPKNATGKMLRRALRD 509
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: ACSF2_RAT (Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus GN=Acsf2 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.688e-19 Identity = 48/155 (30.97%), Postives = 80/155 (51.61%), Query Frame = -2 Query: 107 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKMR 571 ELC+R CVMQGY+ ++T T+ ++ W T K++I G + PAELE HP V++A VV + D+ GE AC+ + +E++I F ++ +K R + FV+G P + SGKI + L+++M + ++ Sbjct: 460 ELCIRGYCVMQGYWGEPQKTFETVGQDRWYRTGDIASMDEQGFCRIVGRSKDMIIRGGENIYPAELEDFFHKHPQVQEAQVVGVKDDRMGEEICACIRLKSGETTTEEEIKAFCKGKISHFKIPRYIVFVEGYPLTVSGKIQKFKLREQMEQHLK 614
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: LCFA_ECO57 (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O157:H7 GN=fadD PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.703e-19 Identity = 52/154 (33.77%), Postives = 80/154 (51.95%), Query Frame = -2 Query: 110 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 571 ELCVR VM GY+ + T I KNGWLHT K++I GF V P E+E +++ HP V++ A V +P +GE V+ + +E+ ++ F + YK +++ F D +PKS+ GKI+RR L+D+ K+ Sbjct: 406 ELCVRGPQVMLGYWQRPDATDEII-KNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGE-AVKIFVVKKDPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKV 557
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: MENE_BACCQ (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain Q1) GN=menE PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.655e-18 Identity = 52/154 (33.77%), Postives = 90/154 (58.44%), Query Frame = -2 Query: 110 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 571 E+ V+ V GY+N E+ T TI +NGWLHT +LI G + PA++E +LL+HP+V +A VV + D++ G++PAA VV + + +E++I+ F +A YK + F++ +P++ S K++RR L+ +++E+M Sbjct: 332 EIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWGQVPAAFVV--KSGEVTEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR-QLVEEM 481
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: MENE_BACC7 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH187) GN=menE PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.162e-18 Identity = 52/154 (33.77%), Postives = 90/154 (58.44%), Query Frame = -2 Query: 110 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 571 E+ V+ V GY+N E+ T TI +NGWLHT +LI G + PA++E +LL+HP+V +A VV + D++ G++PAA VV + + +E++I+ F +A YK + F++ +P++ S K++RR L+ +++E+M Sbjct: 332 EIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWGQVPAAFVV--KSGEVTEEEIIHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR-QLVEEM 481
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: LCFA_ECOLI (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12) GN=fadD PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.162e-18 Identity = 51/154 (33.12%), Postives = 80/154 (51.95%), Query Frame = -2 Query: 110 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 571 ELCV+ VM GY+ + T I KNGWLHT K++I GF V P E+E +++ HP V++ A V +P +GE V+ + +E+ ++ F + YK +++ F D +PKS+ GKI+RR L+D+ K+ Sbjct: 406 ELCVKGPQVMLGYWQRPDATDEII-KNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGE-AVKIFVVKKDPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKV 557 The following BLAST results are available for this feature:
BLAST of CN181984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 164
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181984 ID=CN181984; Name=CN181984; organism=Citrus sinensis; type=EST; length=572bpback to top |