CN181984

Overview
NameCN181984
Unique NameCN181984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: LCFA_ECOL6 (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O6 GN=fadD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.162e-18
Identity = 51/154 (33.12%), Postives = 80/154 (51.95%), Query Frame = -2 
Query:  110 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 571
            ELCV+   VM GY+   + T   I KNGWLHT                  K++I   GF V P E+E +++ HP V++ A V +P   +GE      V+  +   +E+ ++ F    +  YK  +++ F D +PKS+ GKI+RR L+D+   K+
Sbjct:  406 ELCVKGPQVMLGYWQRPDATDEII-KNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGE-AVKIFVVKKDPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKV 557
[Close]
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: MENE_BACWK (2-succinylbenzoate--CoA ligase OS=Bacillus weihenstephanensis (strain KBAB4) GN=menE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.823e-18
Identity = 53/154 (34.42%), Postives = 88/154 (57.14%), Query Frame = -2 
Query:  110 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 571
            E+ V+   V  GY+N E+ T   I +NGWLHT                   +LI   G  + PA++E +LL+HP+V +A VV + DE  G++PAA VV + +   +E++I+ F    +A YK  +   F++ +P++ S K++RR L+ K++E+M
Sbjct:  332 EIVVKGPNVTGGYFNREDATHEAI-RNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVVEAGVVGMADESWGQVPAAFVVKSGDV--TEEEIIRFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR-KLVEEM 481
[Close]
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: MENE_BACHK (2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis subsp. konkukian GN=menE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.823e-18
Identity = 52/154 (33.77%), Postives = 89/154 (57.79%), Query Frame = -2 
Query:  110 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 571
            E+ V+   V  GY+N E+ T  TI +NGWLHT                   +LI   G  + PA++E +LL+HP V +A VV + D++ G++PAA VV   + + +E++I+ F    +A YK  +   F++ +P++ S K++RR L+ +++E+M
Sbjct:  333 EIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVV--KSGEVTEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR-QLVEEM 482
[Close]
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: MENE_BACCZ (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ZK / E33L) GN=menE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.823e-18
Identity = 52/154 (33.77%), Postives = 89/154 (57.79%), Query Frame = -2 
Query:  110 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 571
            E+ V+   V  GY+N E+ T  TI +NGWLHT                   +LI   G  + PA++E +LL+HP V +A VV + D++ G++PAA VV   + + +E++I+ F    +A YK  +   F++ +P++ S K++RR L+ +++E+M
Sbjct:  333 EIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVV--KSGEITEEEILHFCEEKLAKYKVPKKAWFLEELPRNASKKLLRRELR-QLVEEM 482
[Close]
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: MENE_BACCR (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=menE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.823e-18
Identity = 52/154 (33.77%), Postives = 89/154 (57.79%), Query Frame = -2 
Query:  110 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 571
            E+ V+   V  GY+N E+ T  TI +NGWLHT                   +LI   G  + PA++E +LL+HP+V +A VV + D++ G++PAA VV   +   +E++I+ F    +A YK  +   F++ +P++ S K++RR L+ +++E+M
Sbjct:  333 EIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMSDDKWGQVPAAFVV--KSGAVTEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR-QLVEEM 482
[Close]
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: MENE_BACC0 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH820) GN=menE PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.687e-18
Identity = 52/154 (33.77%), Postives = 89/154 (57.79%), Query Frame = -2 
Query:  110 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 571
            E+ V+   V  GY+N E+ T  TI +NGWLHT                   +LI   G  + PA++E +LL+HP V +A VV + D++ G++PAA VV   + + +E++I+ F    +A YK  +   F++ +P++ S K++RR L+ +++E+M
Sbjct:  333 EIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVV--KSGEITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR-QLVEEM 482
[Close]
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: MENE_BACAN (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis GN=menE PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.687e-18
Identity = 52/154 (33.77%), Postives = 89/154 (57.79%), Query Frame = -2 
Query:  110 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 571
            E+ V+   V  GY+N E+ T  TI +NGWLHT                   +LI   G  + PA++E +LL+HP V +A VV + D++ G++PAA VV   + + +E++I+ F    +A YK  +   F++ +P++ S K++RR L+ +++E+M
Sbjct:  332 EIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVV--KSGEITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR-QLVEEM 481
[Close]
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: MENE_BACAH (2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis (strain Al Hakam) GN=menE PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.687e-18
Identity = 52/154 (33.77%), Postives = 89/154 (57.79%), Query Frame = -2 
Query:  110 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 571
            E+ V+   V  GY+N E+ T  TI +NGWLHT                   +LI   G  + PA++E +LL+HP V +A VV + D++ G++PAA VV   + + +E++I+ F    +A YK  +   F++ +P++ S K++RR L+ +++E+M
Sbjct:  333 EIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVV--KSGEITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR-QLVEEM 482
[Close]
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: MENE_BACAC (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=menE PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.687e-18
Identity = 52/154 (33.77%), Postives = 89/154 (57.79%), Query Frame = -2 
Query:  110 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 571
            E+ V+   V  GY+N E+ T  TI +NGWLHT                   +LI   G  + PA++E +LL+HP V +A VV + D++ G++PAA VV   + + +E++I+ F    +A YK  +   F++ +P++ S K++RR L+ +++E+M
Sbjct:  333 EIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVV--KSGEITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR-QLVEEM 482
[Close]
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: MENE_BACAA (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis (strain A0248) GN=menE PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.687e-18
Identity = 52/154 (33.77%), Postives = 89/154 (57.79%), Query Frame = -2 
Query:  110 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 571
            E+ V+   V  GY+N E+ T  TI +NGWLHT                   +LI   G  + PA++E +LL+HP V +A VV + D++ G++PAA VV   + + +E++I+ F    +A YK  +   F++ +P++ S K++RR L+ +++E+M
Sbjct:  333 EIVVKGPNVTGGYFNREDATRETI-QNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVV--KSGEITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR-QLVEEM 482
The following BLAST results are available for this feature:
BLAST of CN181984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
LCFA_ECOL62.162e-1833.12Long-chain-fatty-acid--CoA ligase OS=Escherichia c... [more]
MENE_BACWK2.823e-1834.422-succinylbenzoate--CoA ligase OS=Bacillus weihens... [more]
MENE_BACHK2.823e-1833.772-succinylbenzoate--CoA ligase OS=Bacillus thuring... [more]
MENE_BACCZ2.823e-1833.772-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACCR2.823e-1833.772-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACC03.687e-1833.772-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACAN3.687e-1833.772-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
MENE_BACAH3.687e-1833.772-succinylbenzoate--CoA ligase OS=Bacillus thuring... [more]
MENE_BACAC3.687e-1833.772-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
MENE_BACAA3.687e-1833.772-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001M08_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001M08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181984 ID=CN181984; Name=CN181984; organism=Citrus sinensis; type=EST; length=572bp
TATCGAAGGACACAAAGTTAACACATAGAGCGATGAATGTTAAGCATCCA
ACAACAAGTGATCAAAGGGGAGAAAATTAATAAGCCGGCTGCGTCAGATT
TCACTTTCGCATCTTCTCAAGCATCTTGTCTTTGAGAATCCTTCTCATTA
TTTTCCCAGAGTGAGACTTTGGGATGCCATCCACAAAGTGCAAGACTCTC
ACTTTCTTATAAGTTGCAACGTTGGAGGCCACGAAGTCCATAATATCATC
TTCACTTTCTTTGGCATTTGGGTTCATCACGACACAGGCGGCTGGGATTT
CCCCCGCCTCTTCATCAGGCAGCGACACAACCGCAGCATCTTCAACCGAG
GGATGAGTTAAAAGGATGGCTTCAAGCTCAGCCGGGGCTACTTGAAACCC
CTTGTACTTGATTAACTCTTTGATGCGATCAACAATAAAAATATCTCCGT
CATCATCTATGTATCCAATGTCACCGGTATGTAGCCACCCATTCTTGTCA
ATGGTCCTTGCAGTTTCCTCTTCATTGTTATAGTAACCTTGCATTACACA
TTGACTTCTGACGCAAAGCTCA
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