CN181984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_ECO55 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain 55989 / EAEC) GN=caiC PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 4.983e-15 Identity = 46/150 (30.67%), Postives = 74/150 (49.33%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + Y+ N + TA+ ++ +GWLHT +IK G V+ ELE I+ THP ++D VV + D E A VV+N SE++ F N+A +K L +P++ SGKI+R+ LK Sbjct: 368 EICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_ECO24 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=caiC PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 4.983e-15 Identity = 46/150 (30.67%), Postives = 74/150 (49.33%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + Y+ N + TA+ ++ +GWLHT +IK G V+ ELE I+ THP ++D VV + D E A VV+N SE++ F N+A +K L +P++ SGKI+R+ LK Sbjct: 368 EICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: LCFA_YERPE (Long-chain-fatty-acid--CoA ligase OS=Yersinia pestis GN=fadD PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.508e-15 Identity = 48/149 (32.21%), Postives = 78/149 (52.35%), Query Frame = -2 Query: 125 ELCVRSQCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDK 571 EL VR VM GY+ + T + K+GWL T K++I GF V P E+E ++ H V ++AV+ +P+E +GE VV N +A + ++++ + YK +++ F D +PKS+ GKI+RR L+D+ Sbjct: 406 ELWVRGPQVMLGYWQRPDATDDVL-KDGWLATGDIATMDEDGFLRIVDRKKDMILVSGFNVYPNEIEEVVALHAKVLESAVIGVPNEVSGEAVKVFVVKN-DASLTPEELLTHCRRYLTGYKVPKIVEFRDELPKSNVGKILRRELRDE 552
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_SALAR (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=caiC PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.508e-15 Identity = 42/150 (28.00%), Postives = 74/150 (49.33%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + Y+ + TA+ ++ NGWLHT ++K G V+ ELE I+ HP ++D V+ + D+ E A VV+N +E+D F N+A +K L + +P++ SGKI+++ LK Sbjct: 368 EICIKGIPGKTLFKSYFERPDATAKALEPNGWLHTGDSGYRDEEGFFYFVDRRCNMVKRGGENVSCVELENIIAGHPKIQDVVVIGIKDDIRDEAIKAFVVLNEGETLTEEDFFTFCEENMAKFKVPSYLEIREDLPRNCSGKIIKKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_ECOUT (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain UTI89 / UPEC) GN=caiC PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 6.508e-15 Identity = 46/150 (30.67%), Postives = 74/150 (49.33%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + Y+ N + TA+ ++ +GWLHT +IK G V+ ELE I+ THP ++D VV + D E A VV+N SE++ F N+A +K L +P++ SGKI+R+ LK Sbjct: 368 EICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFCFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_ECOL6 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O6 GN=caiC PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 6.508e-15 Identity = 46/150 (30.67%), Postives = 74/150 (49.33%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + Y+ N + TA+ ++ +GWLHT +IK G V+ ELE I+ THP ++D VV + D E A VV+N SE++ F N+A +K L +P++ SGKI+R+ LK Sbjct: 368 EICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFCFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_ECOL5 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=caiC PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 6.508e-15 Identity = 46/150 (30.67%), Postives = 74/150 (49.33%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + Y+ N + TA+ ++ +GWLHT +IK G V+ ELE I+ THP ++D VV + D E A VV+N SE++ F N+A +K L +P++ SGKI+R+ LK Sbjct: 368 EICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFCFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_ECOK1 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O1:K1 / APEC GN=caiC PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 6.508e-15 Identity = 46/150 (30.67%), Postives = 74/150 (49.33%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + Y+ N + TA+ ++ +GWLHT +IK G V+ ELE I+ THP ++D VV + D E A VV+N SE++ F N+A +K L +P++ SGKI+R+ LK Sbjct: 368 EICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFCFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_ECO8A (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O8 (strain IAI1) GN=caiC PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 6.508e-15 Identity = 46/150 (30.67%), Postives = 74/150 (49.33%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + Y+ N + TA+ ++ +GWLHT +IK G V+ ELE I+ THP ++D VV + D E A VV+N SE++ F N+A +K L +P++ SGKI+R+ LK Sbjct: 368 EICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVVNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CN181984 vs. ExPASy Swiss-Prot
Match: CAIC_ECO81 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O81 (strain ED1a) GN=caiC PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 6.508e-15 Identity = 46/150 (30.67%), Postives = 74/150 (49.33%), Query Frame = -2 Query: 131 ELCVRS---QCVMQGYYNNEEETARTIDKNGWLHTXXXXXXXXXXXXXXXXXIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 571 E+C++ + + + Y+ N + TA+ ++ +GWLHT +IK G V+ ELE I+ THP ++D VV + D E A VV+N SE++ F N+A +K L +P++ SGKI+R+ LK Sbjct: 368 EICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFCFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517 The following BLAST results are available for this feature:
BLAST of CN181984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 164
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181984 ID=CN181984; Name=CN181984; organism=Citrus sinensis; type=EST; length=572bpback to top |