CN181983

Overview
NameCN181983
Unique NameCN181983
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 1.353e-52
Identity = 98/191 (51.31%), Postives = 141/191 (73.82%), Query Frame = 1
Query:    1 EASNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVL 573
            + SNKLG+GGFGPVYKG L +G+ +AVK LS  S QG  +F  E++ I+ + HRNLVKL GCC E + +ML+YE++PN SLD  +F +     LDW  R++I LG+ARG++YLH+++ +RI+HRD+KASNILLD  + P+IS FG A+++  ++   +T RV GT GY++PEYA+ G  + K+DV+ FGV+
Sbjct:  695 DPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDKTLH-LDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHIST-RVAGTIGYLAPEYAMRGHLTEKTDVYAFGVV 883          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 8.767e-52
Identity = 99/192 (51.56%), Postives = 139/192 (72.40%), Query Frame = 1
Query:    1 EASNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQL-LDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVL 573
            +  NK+G+GGFGPVYKG LA+G  IAVK+LS+ S QG  EF  E+ +I+ LQH NLVKL GCC+E  E +L+YE++ N SL   +F   +++L LDW  R  I +GIA+G+ YLH++SRL+I+HRD+KA+N+LLD  +N +IS FG A++   E    +T R+ GT GYM+PEYA+ G  + K+DV+ FGV+
Sbjct:  670 DPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHIST-RIAGTIGYMAPEYAMRGYLTDKADVYSFGVV 860          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 1.953e-51
Identity = 98/192 (51.04%), Postives = 140/192 (72.92%), Query Frame = 1
Query:    1 EASNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQL-LDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVL 573
            +  NK+G+GGFGPVYKG LA+G  IAVK+LS+ S QG  EF  E+ +I+ LQH NLVKL GCC+E  E +L+YE++ N SL   +F   +++L LDW  R  + +GIA+G+ YLH++SRL+I+HRD+KA+N+LLD  +N +IS FG A++   EE +  + R+ GT GYM+PEYA+ G  + K+DV+ FGV+
Sbjct:  668 DPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKL-DEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVV 858          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 5.683e-51
Identity = 99/195 (50.77%), Postives = 142/195 (72.82%), Query Frame = 1
Query:    1 EASNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIF--DESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARV--FGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVL 573
            + + K+G+GGFG VYKG+L+ G+ IAVK+LS  S QG  EF NE+ +I+ LQH NLVKL GCC+E ++ +L+YE++ N  L   +F  DES +  LDW  R  I LGIA+G+ +LH++SR++I+HRD+KASN+LLD+++N +IS FG A++   G   IST   R+ GT GYM+PEYA+ G  + K+DV+ FGV+
Sbjct:  679 DVTRKIGEGGFGSVYKGELSEGKLIAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHIST---RIAGTIGYMAPEYAMRGYLTEKADVYSFGVV 870          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 7.422e-51
Identity = 98/189 (51.85%), Postives = 135/189 (71.43%), Query Frame = 1
Query:   10 NKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            NKLGQGG G VYKG L NG+ +AVKRL   + Q ++ F NEV LI+++ H+NLVKLLGC +   E +L+YE++ N+SL  ++F     Q L+W KRF IILG A G+ YLH++S LRIIHRD+K SNILL+++  PRI+ FG AR+F  ++   +T  + GT GYM+PEY + G  + K+DV+ FGVL+
Sbjct:  327 NKLGQGGSGSVYKGVLTNGKTVAVKRLFFNTKQWVDHFFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLFVRKDVQPLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHIST-AIAGTLGYMAPEYVVRGKLTEKADVYSFGVLM 514          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.683e-50
Identity = 96/190 (50.53%), Postives = 136/190 (71.58%), Query Frame = 1
Query:    7 SNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +NKLGQGGFG VYKG L +G++IAVKRL   +     +F NEV +I+ ++H+NLV+LLGC     E +L+YE++ NKSLD FIFD +R + LDW++R+ II+G A G++YLH+ S ++IIHRD+KASNILLD ++  +I+ FG AR F  ++   +T  + GT GYM+PEY   G  +   DV+ FGVL+
Sbjct:  328 ANKLGQGGFGTVYKGVLPDGRDIAVKRLFFNNRHRATDFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHIST-AIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLV 516          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.072e-49
Identity = 98/191 (51.31%), Postives = 139/191 (72.77%), Query Frame = 1
Query:    7 SNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQL-LDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +NK+G+GGFG V+KG LA+G+ +AVK+LS+ S QG  EF NE+  I+ LQH NLVKL G C+E+ + +L YE+M N SL   +F    KQ+ +DW  RF I  GIA+G+ +LH++S L+ +HRD+KA+NILLD+++ P+IS FG AR+   E+   +T +V GT GYM+PEYAL G  + K+DV+ FGVL+
Sbjct:  684 TNKIGEGGFGAVFKGVLADGRVVAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHIST-KVAGTIGYMAPEYALWGYLTFKADVYSFGVLV 873          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 5.319e-49
Identity = 92/190 (48.42%), Postives = 138/190 (72.63%), Query Frame = 1
Query:    7 SNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            S KLGQGG G VYKG L +G+ +AVK+L   + +  ++F NEV LI+ +QH+NLV+LLGC +E  + +L+YE++ N+SLD  +F ++   +L WK+RF+II+GI+ G+ YLH+ S ++IIHRD+K SNILLD  ++P+I+ FG  R  G ++  TNT  + GT GY++PEY + G  + K+DV+ FGVL+
Sbjct:  321 SMKLGQGGAGSVYKGILPDGRIVAVKKLFFNTREWADQFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILFMKNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTG-IAGTLGYLAPEYLIKGQLTEKADVYAFGVLI 509          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 6.502e-47
Identity = 95/195 (48.72%), Postives = 134/195 (68.72%), Query Frame = 1
Query:    7 SNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVF--GGEEI---STNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            S KLG GG+G V+KG L++G+EIA+KRL  +  +  +E  NE+ +I++ QH+NLV+LLGCC       ++YEF+ N SLD+ +F+  +K+ LDWKKR  IILG A G+ YLH+    +IIHRD+KASNILLD +  P+IS FG A+ +  GG++I   S + + + GT GYM+PEY   G  S K D + FGVL+
Sbjct:  334 SCKLGVGGYGEVFKGTLSDGREIAIKRLHVSGKKPRDEIHNEIDVISRCQHKNLVRLLGCCFTNMNSFIVYEFLANTSLDHILFNPEKKKELDWKKRRTIILGTAEGLEYLHE--TCKIIHRDIKASNILLDLKYKPKISDFGLAKFYPEGGKDIPASSLSPSSIAGTLGYMAPEYISKGRLSNKIDAYSFGVLV 526          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 4.660e-45
Identity = 87/190 (45.79%), Postives = 134/190 (70.53%), Query Frame = 1
Query:   10 NKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIF-DESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            N +G+GG+G VY+G L +G ++AVK L    GQ  +EFK EV +I +++H+NLV+LLG C+E   +ML+Y+F+ N +L+ +I  D      L W  R +IILG+A+G+ YLH+    +++HRD+K+SNILLD + N ++S FG A++ G E  S  T RV+GT+GY++PEYA  G+ + KSD++ FG+L+
Sbjct:  158 NVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSES-SYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILI 346          
The following BLAST results are available for this feature:
BLAST of CN181983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1561_ARATH1.353e-5251.31Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH8.767e-5251.56Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH1.953e-5151.04Probable LRR receptor-like serine/threonine-protei... [more]
Y1765_ARATH5.683e-5150.77Probable LRR receptor-like serine/threonine-protei... [more]
CRK3_ARATH7.422e-5151.85Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
CRK2_ARATH3.683e-5050.53Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
RKF1_ARATH1.072e-4951.31Probable LRR receptor-like serine/threonine-protei... [more]
CRK1_ARATH5.319e-4948.42Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
CRK43_ARATH6.502e-4748.72Putative cysteine-rich receptor-like protein kinas... [more]
Y1154_ARATH4.660e-4545.79Probable serine/threonine-protein kinase At1g01540... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001M07_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001M07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181983 ID=CN181983; Name=CN181983; organism=Citrus sinensis; type=EST; length=578bp
GAGGCTTCTAATAAGCTTGGACAAGGGGGATTTGGTCCAGTTTACAAGGG
TAAGCTAGCGAATGGACAGGAGATAGCTGTCAAAAGGTTATCAACAACAT
CAGGACAAGGAATTGAGGAATTCAAAAATGAGGTCTTATTGATAGCAAAA
CTTCAACACAGAAATCTTGTAAAGCTCTTGGGTTGTTGTTTGGAAAAAGA
TGAAAAGATGTTAATCTATGAGTTCATGCCTAACAAAAGCTTGGACTACT
TTATTTTTGATGAATCAAGGAAGCAATTGTTGGATTGGAAAAAGCGCTTC
GATATAATTTTAGGGATAGCTCGAGGGGTCCTATATCTACATCAAGATTC
GAGGTTAAGAATTATCCATCGAGACTTGAAAGCTAGTAATATTCTTCTAG
ATGAAGAGATGAACCCTAGAATCTCACATTTTGGTACAGCTAGAGTATTT
GGAGGAGAGGAGATATCAACAAATACAAATAGGGTGGTTGGAACGTATGG
CTATATGTCACCAGAGTATGCACTGGGTGGCCTATTCTCTACGAAATCAG
ATGTCTTTCAGTTTGGAGTCCTATTATT
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