CN181983

Overview
NameCN181983
Unique NameCN181983
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: MET_MUNMU (Hepatocyte growth factor receptor OS=Muntiacus muntjak GN=MET PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.322e-15
Identity = 63/195 (32.31%), Postives = 101/195 (51.79%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQE----IAVKRLSTTSGQG-IEEFKNEVLLIAKLQHRNLVKLLGCCLEKD-EKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTAR-VFGGEEIST-NTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +G+G FG VY G L +  +     AVK L+  +  G + +F  E +++    H N++ LLG CL  +   +++  +M +  L  FI +E+    +  K      L +A+G+ YL   +  + +HRDL A N +LDE+   +++ FG AR V+  E  S  N         +M+ E      F+TKSDV+ FGVLL
Sbjct: 1085 IGRGHFGCVYHGTLLDNDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMEYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 1274          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: MET_LOXAF (Hepatocyte growth factor receptor OS=Loxodonta africana GN=MET PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.322e-15
Identity = 65/195 (33.33%), Postives = 102/195 (52.31%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLA-NGQE---IAVKRLSTTSGQG-IEEFKNEVLLIAKLQHRNLVKLLGCCLEKD-EKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTAR-VFGGEEIST-NTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +G+G FG VY G L  NG +    AVK L+  +  G + +F  E +++    H N++ LLG CL  +   +++  +M +  L  FI +E+    +  K      L +A+G+ YL   +  + +HRDL A N +LDE+   +++ FG AR V+  E  S  N         +M+ E      F+TKSDV+ FGVLL
Sbjct: 1085 IGRGHFGCVYHGTLLDNGDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 1274          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: MET_BOVIN (Hepatocyte growth factor receptor OS=Bos taurus GN=MET PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.322e-15
Identity = 63/195 (32.31%), Postives = 101/195 (51.79%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQE----IAVKRLSTTSGQG-IEEFKNEVLLIAKLQHRNLVKLLGCCLEKD-EKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTAR-VFGGEEIST-NTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +G+G FG VY G L +  +     AVK L+  +  G + +F  E +++    H N++ LLG CL  +   +++  +M +  L  FI +E+    +  K      L +A+G+ YL   +  + +HRDL A N +LDE+   +++ FG AR V+  E  S  N         +M+ E      F+TKSDV+ FGVLL
Sbjct: 1085 IGRGHFGCVYHGTLLDNDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMEYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 1274          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: LCK_RAT (Proto-oncogene tyrosine-protein kinase LCK OS=Rattus norvegicus GN=Lck PE=2 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 1.322e-15
Identity = 62/188 (32.98%), Postives = 99/188 (52.66%), Query Frame = 1
Query:   13 KLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +LG G FG V+ G      ++AVK L   S    + F  E  L+ +LQH  LV+L    + ++   +I E+M N SL  F+   S  +L +  K  D+   IA G+ ++ + +    IHRDL+A+NIL+ + ++ +I+ FG AR+    E +           + +PE    G F+ KSDV+ FG+LL
Sbjct:  250 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHPRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKL-NVNKLLDMAAQIAEGMAFIEEQN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILL 430          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: LCK_MOUSE (Proto-oncogene tyrosine-protein kinase LCK OS=Mus musculus GN=Lck PE=1 SV=4)

HSP 1 Score: 82.8037 bits (203), Expect = 1.322e-15
Identity = 62/188 (32.98%), Postives = 99/188 (52.66%), Query Frame = 1
Query:   13 KLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +LG G FG V+ G      ++AVK L   S    + F  E  L+ +LQH  LV+L    + ++   +I E+M N SL  F+   S  +L +  K  D+   IA G+ ++ + +    IHRDL+A+NIL+ + ++ +I+ FG AR+    E +           + +PE    G F+ KSDV+ FG+LL
Sbjct:  250 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHPRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKL-NVNKLLDMAAQIAEGMAFIEEQN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILL 430          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: LCK_AOTNA (Proto-oncogene tyrosine-protein kinase LCK OS=Aotus nancymaae GN=LCK PE=2 SV=4)

HSP 1 Score: 82.8037 bits (203), Expect = 1.322e-15
Identity = 62/188 (32.98%), Postives = 100/188 (53.19%), Query Frame = 1
Query:   13 KLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +LG G FG V+ G   +  ++AVK L   S    + F  E  L+ +LQH+ LV+L    + ++   +I E+M N SL  F+   S  +L    K  D+   IA G+ ++ + +    IHRDL+A+NIL+ + ++ +I+ FG AR+    E +           + +PE    G F+ KSDV+ FG+LL
Sbjct:  250 RLGAGQFGEVWMGYYNDHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILL 430          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: GDT4_DICDI (Probable serine/threonine-protein kinase gdt4 OS=Dictyostelium discoideum GN=gdt4 PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.322e-15
Identity = 58/191 (30.37%), Postives = 95/191 (49.74%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILL-----DEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVL 573
            L +G FG VY   +     +AVK       +  +E   E  +++K++H N+V  +G     +   ++ ++ P  SL+Y+  +++ K  L   +   I L I+R   +LH++    IIHRDLK  N+L+     D  +  +IS FGT R   G+      N   GT  YMSPE   G  ++  +DV+ F +L
Sbjct: 1355 LSEGSFGVVYSA-IWRSSSVAVKLFKHHYSK--DEIDKETSILSKIKHPNIVSFIGSLNFLNTYGIVIDYHPRGSLNYYTRNQNIK--LSMVQNIRISLDISRACSFLHKNG---IIHRDLKPDNVLIVSFDPDSSICAKISDFGTCREINGKH---ELNSKAGTTRYMSPEILEGLPYTYSTDVYSFAIL 1534          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y5720_ARATH (Probable inactive receptor kinase At5g67200 OS=Arabidopsis thaliana GN=At5g67200 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.727e-15
Identity = 59/192 (30.73%), Postives = 95/192 (49.48%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQEIAVKRLST--TSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFD--ESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFST-KSDVFQFGVLL 576
            LG+G  G  YK  L N   + VKRL    T+    E F+N + ++  L+H NLV +        E+++IY++ PN SL   I     SR + L W     I   +A+G+ Y+HQ S   ++H +LK++NILL ++    ++ +  + +      S +      +  Y +PE        T K DV+ FGVL+
Sbjct:  399 LGRGSVGITYKAVLDNQLIVTVKRLDAAKTAVTSEEAFENHMEIVGGLRHTNLVPIRSYFQSNGERLIIYDYHPNGSLFNLIHGSRSSRAKPLHWTSCLKIAEDVAQGLYYIHQTSS-ALVHGNLKSTNILLGQDFEACLTDYCLSVLTDSSSASPDD---PDSSSYKAPEIRKSSRRPTSKCDVYSFGVLI 586          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: TRK1_LYMST (Putative neurotrophin receptor LTRK 1 OS=Lymnaea stagnalis PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.727e-15
Identity = 63/212 (29.72%), Postives = 107/212 (50.47%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQE------IAVKRLSTTSGQGIE-EFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFI--------FDESRKQL------LDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGT----YGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +G+G FG V+ G  A+  +      +AVK L  +    ++ +F+ E  ++A ++H N+V   G C E D+ M+I+EFM N  L+ ++        F + R  +      L  ++   I+L IA  + YL   +    +HRDL   N L+  ++  ++  FG +R    +  +T+  RV GT      +M PE  +   F+T+SDV+ FGV L
Sbjct:  510 IGEGAFGRVFLGTCAHLIQKNEFAIVAVKTLKGSCSDSLKRDFEREAEMLATIEHANIVTFYGVCTESDQWMMIFEFMENGDLNKYLRMHGPDAAFLKDRDSMDSDEGQLTREQLMKIVLQIASAMEYL---ALQHFVHRDLATRNCLVGCDLVVKLGDFGMSR----DVYTTDYYRVEGTAMLPVRWMPPESIIYRTFTTESDVWSFGVTL 714          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: TAOK3_HUMAN (Serine/threonine-protein kinase TAO3 OS=Homo sapiens GN=TAOK3 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.727e-15
Identity = 59/194 (30.41%), Postives = 101/194 (52.06%), Query Frame = 1
Query:   10 NKLGQGGFGPVYKGKLANGQEI-AVKRLSTTSGQGIEEFKN---EVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALG---GLFSTKSDVFQFGV 570
            +++G G FG VY    A+  E+ A+K++S +  Q  E++++   EV  + +L+H N ++  GC L++    L+ E+    + D     E  K+ L   +   I  G   G+ YLH  +   +IHRD+KA NILL E    +++ FG+A       +++  N  VGT  +M+PE  L    G +  K D++  G+
Sbjct:   28 HEIGHGSFGAVYFATNAHTSEVVAIKKMSYSGKQTHEKWQDILKEVKFLRQLKHPNTIEYKGCYLKEHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAITHGALHGLAYLHSHA---LIHRDIKAGNILLTEPGQVKLADFGSA------SMASPANSFVGTPYWMAPEVILAMDEGQYDGKVDIWSLGI 209          
The following BLAST results are available for this feature:
BLAST of CN181983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MET_MUNMU1.322e-1532.31Hepatocyte growth factor receptor OS=Muntiacus mun... [more]
MET_LOXAF1.322e-1533.33Hepatocyte growth factor receptor OS=Loxodonta afr... [more]
MET_BOVIN1.322e-1532.31Hepatocyte growth factor receptor OS=Bos taurus GN... [more]
LCK_RAT1.322e-1532.98Proto-oncogene tyrosine-protein kinase LCK OS=Ratt... [more]
LCK_MOUSE1.322e-1532.98Proto-oncogene tyrosine-protein kinase LCK OS=Mus ... [more]
LCK_AOTNA1.322e-1532.98Proto-oncogene tyrosine-protein kinase LCK OS=Aotu... [more]
GDT4_DICDI1.322e-1530.37Probable serine/threonine-protein kinase gdt4 OS=D... [more]
Y5720_ARATH1.727e-1530.73Probable inactive receptor kinase At5g67200 OS=Ara... [more]
TRK1_LYMST1.727e-1529.72Putative neurotrophin receptor LTRK 1 OS=Lymnaea s... [more]
TAOK3_HUMAN1.727e-1530.41Serine/threonine-protein kinase TAO3 OS=Homo sapie... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001M07_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001M07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181983 ID=CN181983; Name=CN181983; organism=Citrus sinensis; type=EST; length=578bp
GAGGCTTCTAATAAGCTTGGACAAGGGGGATTTGGTCCAGTTTACAAGGG
TAAGCTAGCGAATGGACAGGAGATAGCTGTCAAAAGGTTATCAACAACAT
CAGGACAAGGAATTGAGGAATTCAAAAATGAGGTCTTATTGATAGCAAAA
CTTCAACACAGAAATCTTGTAAAGCTCTTGGGTTGTTGTTTGGAAAAAGA
TGAAAAGATGTTAATCTATGAGTTCATGCCTAACAAAAGCTTGGACTACT
TTATTTTTGATGAATCAAGGAAGCAATTGTTGGATTGGAAAAAGCGCTTC
GATATAATTTTAGGGATAGCTCGAGGGGTCCTATATCTACATCAAGATTC
GAGGTTAAGAATTATCCATCGAGACTTGAAAGCTAGTAATATTCTTCTAG
ATGAAGAGATGAACCCTAGAATCTCACATTTTGGTACAGCTAGAGTATTT
GGAGGAGAGGAGATATCAACAAATACAAATAGGGTGGTTGGAACGTATGG
CTATATGTCACCAGAGTATGCACTGGGTGGCCTATTCTCTACGAAATCAG
ATGTCTTTCAGTTTGGAGTCCTATTATT
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