CN181983

Overview
NameCN181983
Unique NameCN181983
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.715e-39
Identity = 87/189 (46.03%), Postives = 119/189 (62.96%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVF--GGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            LG+GGFG VY G L   +++AVK LS TS QG +EFK EV L+ ++ H NLV L+G C E+D   LIYE+M N  L   +  +    +L+W  R  I +  A G+ YLH   +  ++HRD+K++NILLDEE   +I+ FG +R F  GG++   +T  V GT GY+ PEY L    S KSDV+ FG+LL
Sbjct:  572 LGEGGFGVVYHGDLNGSEQVAVKLLSQTSAQGYKEFKAEVELLLRVHHINLVNLVGYCDEQDHFALIYEYMSNGDLHQHLSGKHGGSVLNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVST-VVAGTLGYLDPEYYLTSELSEKSDVYSFGILL 759          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.240e-39
Identity = 82/188 (43.62%), Postives = 119/188 (63.30%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQL-LDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +G GGFG VYK +L +G  +A+K+L   SGQG  EF  E+  I K++HRNLV LLG C   +E++L+YE+M   SL+  + D  +  + L+W  R  I +G ARG+ +LH +    IIHRD+K+SN+LLDE +  R+S FG AR+    +   + + + GT GY+ PEY      STK DV+ +GV+L
Sbjct:  894 VGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVL 1081          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 8.511e-39
Identity = 86/194 (44.33%), Postives = 126/194 (64.95%), Query Frame = 1
Query:    1 EASNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTAR--VFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            EAS  +G GGFG VY G L +G ++AVKR +  S QGI EF+ E+ +++KL+HR+LV L+G C E  E +L+YEFM N      ++ ++    L WK+R +I +G ARG+ YLH  +   IIHRD+K++NILLDE +  +++ FG ++   FG   +ST    V G++GY+ PEY      + KSDV+ FGV+L
Sbjct:  527 EASQIIGVGGFGNVYIGTLDDGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGKNLAP-LTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVST---AVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVL 716          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.112e-38
Identity = 81/187 (43.32%), Postives = 116/187 (62.03%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            LGQGG G VYKG L +G+ +AVKR        +EEF NEV +++++ HRN+VKL+GCCLE +  +L+YE +PN  L   +  +S    + W  R  I + IA  + YLH  +   + HRD+K +NILLDE+   ++S FGT+R    ++    T  V GT+GY+ PEY     F+ KSDV+ FGV+L
Sbjct:  427 LGQGGQGTVYKGMLVDGRIVAVKRSKVLDEDKVEEFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDLFKRLHHDSDDYTMTWDVRLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTHL-TTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVL 612          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.112e-38
Identity = 81/192 (42.19%), Postives = 124/192 (64.58%), Query Frame = 1
Query:    1 EASNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            + S+ LG GGFG VYKG L +G ++AVKR +  S QG+ EF+ E+ +++KL+HR+LV L+G C E+ E +L+YE+M N  L   ++      L  WK+R +I +G ARG+ YLH  +   IIHRD+K +NILLDE +  +++ FG ++     + +  +  V G++GY+ PEY      + KSDV+ FGV+L
Sbjct:  511 DESSLLGVGGFGRVYKGTLEDGTKVAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPL-SWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVL 701          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 1.452e-38
Identity = 83/190 (43.68%), Postives = 118/190 (62.11%), Query Frame = 1
Query:    7 SNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            S  LGQGG G VYKG L +G+ +AVK+        +EEF NEV++++++ HR++VKLLGCCLE +   L+YEF+PN +L   I +ES      W  R  I + IA  + YLH  +   I HRD+K++NILLDE+   ++S FGT+R    +     T  + GT GY+ PEY     ++ KSDV+ FGV+L
Sbjct:  454 SRILGQGGQGTVYKGMLVDGRTVAVKKSKVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIHEESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSVTIDHTHW-TTVISGTVGYVDPEYYGSSQYTDKSDVYSFGVVL 642          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.452e-38
Identity = 85/191 (44.50%), Postives = 120/191 (62.83%), Query Frame = 1
Query:    7 SNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDE-SRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +N +G GGFG VYK  L +G ++A+KRLS  +GQ   EF+ EV  +++ QH NLV LLG C  K++K+LIY +M N SLDY++ ++      LDWK R  I  G A G+ YLHQ     I+HRD+K+SNILL +     ++ FG AR+    +    T+ +VGT GY+ PEY    + + K DV+ FGV+L
Sbjct:  746 ANIIGCGGFGLVYKATLPDGTKVAIKRLSGDTGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTD-LVGTLGYIPPEYGQASVATYKGDVYSFGVVL 935          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.452e-38
Identity = 81/194 (41.75%), Postives = 120/194 (61.86%), Query Frame = 1
Query:    4 ASNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQ---LLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            A   +G GGFG VYK +L +G  +A+K+L   +GQG  EF  E+  I K++HRNLV LLG C   +E++L+YE+M   SL+  + ++S K+    L+W  R  I +G ARG+ +LH      IIHRD+K+SN+LLDE+   R+S FG AR+    +   + + + GT GY+ PEY      + K DV+ +GV+L
Sbjct:  861 AETMVGSGGFGEVYKAQLRDGSVVAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDEDFEARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVIL 1054          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.476e-38
Identity = 86/199 (43.22%), Postives = 124/199 (62.31%), Query Frame = 1
Query:   10 NKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEE---FKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQL---LDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEE----ISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            N +G GG G VY+ KL +GQ +AVK+L   +GQ  E    F++EV  + +++H N+VKLL CC  ++ + L+YEFM N SL   +  E   +    LDW  RF I +G A+G+ YLH DS   I+HRD+K++NILLD EM PR++ FG A+    E+       + + V G+YGY++PEY      + KSDV+ FGV+L
Sbjct:  690 NIIGSGGSGLVYRVKLKSGQTLAVKKLWGETGQKTESESVFRSEVETLGRVRHGNIVKLLMCCNGEEFRFLVYEFMENGSLGDVLHSEKEHRAVSPLDWTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFGLAKPLKREDNDGVSDVSMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVL 888          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.476e-38
Identity = 80/192 (41.67%), Postives = 122/192 (63.54%), Query Frame = 1
Query:    1 EASNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            + SN +G GGFG VYKG +  G ++A+K+ +  S QG+ EF+ E+ L+++L+H++LV L+G C E  E  LIY++M   +L   +++  R Q L WK+R +I +G ARG+ YLH  ++  IIHRD+K +NILLDE    ++S FG ++          T  V G++GY+ PEY      + KSDV+ FGV+L
Sbjct:  522 DESNVIGVGGFGKVYKGVIDGGTKVAIKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLIYDYMSLGTLREHLYNTKRPQ-LTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVL 712          
The following BLAST results are available for this feature:
BLAST of CN181983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MEE39_ARATH1.715e-3946.03Probable LRR receptor-like serine/threonine-protei... [more]
BRI1_SOLLC2.240e-3943.62Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
Y4391_ARATH8.511e-3944.33Probable receptor-like protein kinase At4g39110 OS... [more]
WAKLI_ARATH1.112e-3843.32Wall-associated receptor kinase-like 22 OS=Arabido... [more]
THE1_ARATH1.112e-3842.19Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
WAKLK_ARATH1.452e-3843.68Putative wall-associated receptor kinase-like 11 O... [more]
PSKR1_DAUCA1.452e-3844.50Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
BRL1_ARATH1.452e-3841.75Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
HSL2_ARATH2.476e-3843.22LRR receptor-like serine/threonine-protein kinase ... [more]
ANX2_ARATH2.476e-3841.67Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0001M07_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001M07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181983 ID=CN181983; Name=CN181983; organism=Citrus sinensis; type=EST; length=578bp
GAGGCTTCTAATAAGCTTGGACAAGGGGGATTTGGTCCAGTTTACAAGGG
TAAGCTAGCGAATGGACAGGAGATAGCTGTCAAAAGGTTATCAACAACAT
CAGGACAAGGAATTGAGGAATTCAAAAATGAGGTCTTATTGATAGCAAAA
CTTCAACACAGAAATCTTGTAAAGCTCTTGGGTTGTTGTTTGGAAAAAGA
TGAAAAGATGTTAATCTATGAGTTCATGCCTAACAAAAGCTTGGACTACT
TTATTTTTGATGAATCAAGGAAGCAATTGTTGGATTGGAAAAAGCGCTTC
GATATAATTTTAGGGATAGCTCGAGGGGTCCTATATCTACATCAAGATTC
GAGGTTAAGAATTATCCATCGAGACTTGAAAGCTAGTAATATTCTTCTAG
ATGAAGAGATGAACCCTAGAATCTCACATTTTGGTACAGCTAGAGTATTT
GGAGGAGAGGAGATATCAACAAATACAAATAGGGTGGTTGGAACGTATGG
CTATATGTCACCAGAGTATGCACTGGGTGGCCTATTCTCTACGAAATCAG
ATGTCTTTCAGTTTGGAGTCCTATTATT
back to top