CN181983

Overview
NameCN181983
Unique NameCN181983
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.234e-38
Identity = 80/187 (42.78%), Postives = 122/187 (65.24%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +G GGFG VY+G+L +G  IA+KR +  S QG+ EF+ E++++++L+HR+LV L+G C E +E +L+YE+M N +L   +F  S    L WK+R +  +G ARG+ YLH  S   IIHRD+K +NILLDE    ++S FG ++     + +  +  V G++GY+ PEY      + KSDV+ FGV+L
Sbjct:  526 IGVGGFGKVYRGELEDGTLIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFG-SNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVL 711          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.517e-38
Identity = 77/187 (41.18%), Postives = 119/187 (63.64%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +G GGFG VYKG L +  E+AVKR +  S QG+ EFK EV ++ + +HR+LV L+G C E  E +++YE+M   +L   ++D   K  L W++R +I +G ARG+ YLH  S   IIHRD+K++NILLD+    +++ FG ++     + +  +  V G++GY+ PEY      + KSDV+ FGV++
Sbjct:  493 IGVGGFGKVYKGVLRDKTEVAVKRGAPQSRQGLAEFKTEVEMLTQFRHRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLYDLDDKPRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVM 679          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.517e-38
Identity = 80/191 (41.88%), Postives = 119/191 (62.30%), Query Frame = 1
Query:    4 ASNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            ASN +G GGFG  YK +++    +A+KRLS    QG+++F  E+  + +L+H NLV L+G    + E  L+Y ++P  +L+ FI + S +   DW+    I L IAR + YLH     R++HRD+K SNILLD++ N  +S FG AR+ G  E    T  V GT+GY++PEYA+    S K+DV+ +GV+L
Sbjct:  876 ASNLIGNGGFGATYKAEISQDVVVAIKRLSIGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLVYNYLPGGNLEKFIQERSTR---DWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDCNAYLSDFGLARLLGTSETHATTG-VAGTFGYVAPEYAMTCRVSDKADVYSYGVVL 1062          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 7.205e-38
Identity = 88/198 (44.44%), Postives = 122/198 (61.62%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKL----------ANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRK-QLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            LG+GGFG V+KG +            G  IAVK+L+    QG +E+  EV  + +  HR+LVKL+G CLE + ++L+YEFMP  SL+  +F      Q L WK R  + LG A+G+ +LH  S  R+I+RD K SNILLD E N ++S FG A+     + S  + RV+GT+GY +PEY   G  +TKSDV+ FGV+L
Sbjct:   74 LGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLH-SSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVL 270          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 9.411e-38
Identity = 78/194 (40.21%), Postives = 125/194 (64.43%), Query Frame = 1
Query:    1 EASNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTN--TNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            + +  +G GGFG VYKG+L +G ++AVKR +  S QG+ EF+ E+ ++++ +HR+LV L+G C E +E +L+YE+M N +L   ++      L  WK+R +I +G ARG+ YLH      +IHRD+K++NILLDE +  +++ FG ++   G EI     +  V G++GY+ PEY      + KSDV+ FGV++
Sbjct:  483 DENRAIGVGGFGKVYKGELHDGTKVAVKRANPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKSHLYGSGLLSL-SWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKT--GPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVM 673          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 9.411e-38
Identity = 82/188 (43.62%), Postives = 123/188 (65.43%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQD-SRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +G+GGFG VYK  L +G + A+KR  T SGQGI EF+ E+ ++++++HR+LV L G C E  E +L+YEFM   +L   ++  S    L WK+R +I +G ARG+ YLH   S   IIHRD+K++NILLDE    +++ FG +++   +E + + N + GT+GY+ PEY      + KSDV+ FGV+L
Sbjct:  494 IGKGGFGYVYKAILPDGTKAAIKRGKTGSGQGILEFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYG-SNLPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLSKIHNQDESNISIN-IKGTFGYLDPEYLQTHKLTEKSDVYAFGVVL 679          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 9.411e-38
Identity = 90/196 (45.92%), Postives = 123/196 (62.76%), Query Frame = 1
Query:    4 ASNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTAR---VFGGEEISTN--TNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +S ++GQGG+G VYKG L +G  +A+KR    S QG +EF  E+ L+++L HRNLV LLG C E+ E+ML+YE+M N +L   I     K+ LD+  R  I LG A+G+LYLH ++   I HRD+KASNILLD     +++ FG +R   V   E IS    +  V GT GY+ PEY L    + KSDV+  GV+L
Sbjct:  627 SSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNI-SVKLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVL 821          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 9.411e-38
Identity = 80/193 (41.45%), Postives = 125/193 (64.77%), Query Frame = 1
Query:    1 EASNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVV-GTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            + S  +G GGFG VYKG+L +G ++AVKR +  S QG+ EF+ E+ ++++ +HR+LV L+G C E +E +LIYE+M N ++   ++      L  WK+R +I +G ARG+ YLH      +IHRD+K++NILLDE    +++ FG ++  G E   T+ +  V G++GY+ PEY      + KSDV+ FGV+L
Sbjct:  486 DESRNIGVGGFGKVYKGELNDGTKVAVKRGNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYGSGLPSLT-WKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKT-GPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVL 676          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.229e-37
Identity = 82/194 (42.27%), Postives = 125/194 (64.43%), Query Frame = 1
Query:    1 EASNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTAR--VFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            +AS  +G GGFG VY G + +G ++A+KR +  S QGI EF  E+ +++KL+HR+LV L+G C E  E +L+YE+M N      ++ ++    L WK+R +I +G ARG+ YLH  +   IIHRD+K++NILLDE +  +++ FG ++   FG   +ST    V G++GY+ PEY      + KSDV+ FGV+L
Sbjct:  526 DASEIIGVGGFGNVYIGTIDDGTQVAIKRGNPQSEQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRDHLYGKNLSP-LTWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVST---AVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVL 715          
BLAST of CN181983 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.229e-37
Identity = 79/187 (42.25%), Postives = 112/187 (59.89%), Query Frame = 1
Query:   16 LGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISHFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFQFGVLL 576
            LG+GGFG VY G +   +++AVK LS +S QG +EFK EV L+ ++ H NLV L+G C E D   L+YEF+PN  L   +  +    +++W  R  I L  A G+ YLH      ++HRD+K +NILLDE    +++ FG +R F GE  S  +  + GT GY+ PE    G    KSDV+ FG++L
Sbjct:  570 LGKGGFGMVYHGTVKGSEQVAVKVLSQSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGYLDPECYHSGRLGEKSDVYSFGIVL 756          
The following BLAST results are available for this feature:
BLAST of CN181983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1357_ARATH3.234e-3842.78Probable receptor-like protein kinase At1g30570 OS... [more]
Y2393_ARATH5.517e-3841.18Probable receptor-like protein kinase At2g39360 OS... [more]
RPK2_ARATH5.517e-3841.88LRR receptor-like serine/threonine-protein kinase ... [more]
APK1A_ARATH7.205e-3844.44Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y5597_ARATH9.411e-3840.21Probable receptor-like protein kinase At5g59700 OS... [more]
Y2232_ARATH9.411e-3843.62Probable receptor-like protein kinase At2g23200 OS... [more]
Y1684_ARATH9.411e-3845.92Probable LRR receptor-like serine/threonine-protei... [more]
HERK_ARATH9.411e-3841.45Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
Y2214_ARATH1.229e-3742.27Probable receptor-like protein kinase At2g21480 OS... [more]
RLK7_ARATH1.229e-3742.25Receptor-like protein kinase At5g59670 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001M07_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001M07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181983 ID=CN181983; Name=CN181983; organism=Citrus sinensis; type=EST; length=578bp
GAGGCTTCTAATAAGCTTGGACAAGGGGGATTTGGTCCAGTTTACAAGGG
TAAGCTAGCGAATGGACAGGAGATAGCTGTCAAAAGGTTATCAACAACAT
CAGGACAAGGAATTGAGGAATTCAAAAATGAGGTCTTATTGATAGCAAAA
CTTCAACACAGAAATCTTGTAAAGCTCTTGGGTTGTTGTTTGGAAAAAGA
TGAAAAGATGTTAATCTATGAGTTCATGCCTAACAAAAGCTTGGACTACT
TTATTTTTGATGAATCAAGGAAGCAATTGTTGGATTGGAAAAAGCGCTTC
GATATAATTTTAGGGATAGCTCGAGGGGTCCTATATCTACATCAAGATTC
GAGGTTAAGAATTATCCATCGAGACTTGAAAGCTAGTAATATTCTTCTAG
ATGAAGAGATGAACCCTAGAATCTCACATTTTGGTACAGCTAGAGTATTT
GGAGGAGAGGAGATATCAACAAATACAAATAGGGTGGTTGGAACGTATGG
CTATATGTCACCAGAGTATGCACTGGGTGGCCTATTCTCTACGAAATCAG
ATGTCTTTCAGTTTGGAGTCCTATTATT
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