CN188827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_VIBVU (3-isopropylmalate dehydrogenase OS=Vibrio vulnificus GN=leuB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11 Identity = 68/222 (30.63%), Postives = 102/222 (45.95%), Query Frame = 1 Query: 154 LFPGDGIGPEIAESVKQVFRTAE----VPVEWEEHYV-GTEID----PRTQSFLT-WESLESVRRNKV-GLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCY---SLPGYKTRYDDV-----NLITIRENTEGEY----SGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDN 750 + PGDGIGPE+ +V E + E EEH V G ID P QS +T E ++V V G K P + R L LRK L+ N+RP L + D+ +++ +RE T G Y G E + +I R R+A+ AF A+ R++V +I KAN++Q + L+ + E+A+ YP++ + IDN Sbjct: 10 VLPGDGIGPEVMAQAHKVLDAIEKKHAIHFEREEHDVGGIAIDNHGCPLPQSTVTACEESDAVLFGSVGGPKWEHLPPNDQPERGALLPLRKHFQLFCNLRPAQIHSGLEAFSPLRADISGRGFDIVVVRELTGGIYFGQPKGREGEGANEKAYDTEIYHRFEIERIAKIAFESARLR-RKKVCSIDKANVLQSSI-LWREVVEELAKDYPDVELSHMYIDN 229
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_VIBPA (3-isopropylmalate dehydrogenase OS=Vibrio parahaemolyticus GN=leuB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11 Identity = 66/222 (29.73%), Postives = 102/222 (45.95%), Query Frame = 1 Query: 154 LFPGDGIGPEIAESVKQVFRTAE----VPVEWEEHYV-GTEID----PRTQSFLT-WESLESVRRNKV-GLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCY---SLPGYKTRYDDV-----NLITIRENTEGEY----SGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDN 750 + PGDGIGPE+ +V E + E EEH V G ID P +S +T E ++V V G K P + R L LRK L+ N+RP L + D+ +++ +RE T G Y G E + ++ R R+A+ AF A+ R++V +I KAN++Q + L+ + E+A+ YP++ + IDN Sbjct: 10 VLPGDGIGPEVMAQAHKVLDAIEQKHGISFEREEHDVGGIAIDNHGCPLPESTVTACEESDAVLFGSVGGPKWEHLPPNDQPERGALLPLRKHFQLFCNLRPAQIHAGLEAFSPLRADISGRGFDIVVVRELTGGIYFGQPKGREGEGANEKAFDTEVYHRYEIERIAKIAFESARLR-RKKVCSIDKANVLQSSI-LWREVVEEIAKDYPDVELSHMYIDN 229
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_THEMA (3-isopropylmalate dehydrogenase OS=Thermotoga maritima GN=leuB PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11 Identity = 64/218 (29.36%), Postives = 95/218 (43.58%), Query Frame = 1 Query: 154 LFPGDGIGPEIAESVKQVFRTAEVPV--EWEE---HYVGTEID------PRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPC--------YSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDN 750 + PGDGIGPE+ +V E +E+ H G ID P + E+ + G K P + L LRK LNLYAN+RP S K V+L+T+RE + G Y G + I R+ R+A AF AK R++V+++ KAN++ + L+ K EVA +YP++ + +DN Sbjct: 5 VLPGDGIGPEVVREALKVLEVVEKKTGKTFEKVFGHIGGDAIDRFGEPLPEETKKICLEADAIFLGSVGGPKWDDLPPEKRPEIGGLLALRKMLNLYANIRPIKVYRSLVHVSPLKEKVIGSGVDLVTVRELSYGVYYGQPRGLDEEKGFDTMIYDRKTVERIARTAFEIAKNR-RKKVTSVDKANVLY-SSMLWRKVVNEVAREYPDVELTHIYVDN 220
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_MYCSS (3-isopropylmalate dehydrogenase OS=Mycobacterium sp. (strain MCS) GN=leuB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11 Identity = 59/207 (28.50%), Postives = 95/207 (45.89%), Query Frame = 1 Query: 154 LFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNK---VGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPC--YS-LPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYP--EITYEEV 738 + GDGIGPE+ +V VE + +G T L LE ++ + +G G + P G R L L +R L+ + N+RP YS + G +++ + +RE TEG Y+G + G V + + T RV E AF A+ R+ ++ +HK N++ L+ + +EV +YP EI Y+ V Sbjct: 5 IIAGDGIGPEVIGEAVKVLDAVLPEVEKTTYDLGARRYHATGEILPDSVLEELKVHDAILLGAIGDPSVPSGVLERGLLLRIRFALDHHINLRPAKLYSGVTGPLAGNPEIDFVVVREGTEGPYTGTGGAIRVGTPHEVATEVSLNTAFGVRRVVEDAFRRAQQR-RKHLTLVHKNNVLTFAGALWWRTVQEVGAEYPDVEIAYQHV 210
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_MYCSK (3-isopropylmalate dehydrogenase OS=Mycobacterium sp. (strain KMS) GN=leuB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11 Identity = 59/207 (28.50%), Postives = 95/207 (45.89%), Query Frame = 1 Query: 154 LFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNK---VGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPC--YS-LPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYP--EITYEEV 738 + GDGIGPE+ +V VE + +G T L LE ++ + +G G + P G R L L +R L+ + N+RP YS + G +++ + +RE TEG Y+G + G V + + T RV E AF A+ R+ ++ +HK N++ L+ + +EV +YP EI Y+ V Sbjct: 5 IIAGDGIGPEVIGEAVKVLDAVLPEVEKTTYDLGARRYHATGEILPDSVLEELKVHDAILLGAIGDPSVPSGVLERGLLLRIRFALDHHINLRPAKLYSGVTGPLAGNPEIDFVVVREGTEGPYTGTGGAIRVGTPHEVATEVSLNTAFGVRRVVEDAFRRAQQR-RKHLTLVHKNNVLTFAGALWWRTVQEVGAEYPDVEIAYQHV 210
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_MYCSJ (3-isopropylmalate dehydrogenase OS=Mycobacterium sp. (strain JLS) GN=leuB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11 Identity = 59/207 (28.50%), Postives = 95/207 (45.89%), Query Frame = 1 Query: 154 LFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNK---VGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPC--YS-LPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYP--EITYEEV 738 + GDGIGPE+ +V VE + +G T L LE ++ + +G G + P G R L L +R L+ + N+RP YS + G +++ + +RE TEG Y+G + G V + + T RV E AF A+ R+ ++ +HK N++ L+ + +EV +YP EI Y+ V Sbjct: 5 IIAGDGIGPEVIGEAVKVLDAVLPEVEKTTYDLGARRYHATGEILPDSVLEELKVHDAILLGAIGDPSVPSGVLERGLLLRIRFALDHHINLRPAKLYSGVTGPLAGNPEIDFVVVREGTEGPYTGTGGAIRVGTPHEVATEVSLNTAFGVRRVVEDAFRRAQQR-RKHLTLVHKNNVLTFAGALWWRTVQEVGAEYPDVEIAYQHV 210
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_BACHD (3-isopropylmalate dehydrogenase OS=Bacillus halodurans GN=leuB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11 Identity = 65/221 (29.41%), Postives = 109/221 (49.32%), Query Frame = 1 Query: 154 LFPGDGIGPEIAESVKQVFRTAEV----PVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGK---GHRSLN---LTLRKELNLYANVRPCY---SLPGYKTRYDDV----NLITIRENTEGEYSGLEHQVVRGVVESLKII-----TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDN 750 + PGDGIGPE+ ++ +V + +++ +G + L E+L+ R L G + P GH L LRK LNL+AN+RP SL T +DV +L+ +RE T G Y G E + RG E+ +++ TR R+ AF A + V+++ KAN+++ + ++ + EVA+++PE+T E +++DN Sbjct: 7 VLPGDGIGPEVTDAAIEVLQAVADRFGHTFSYKKALLGGCAIDEVGTPLPEETLDVCRHADGILLGAVGGPKWDTLPGHLRPEKGLLGLRKGLNLFANLRPVTVYDSLADASTLKNDVIDGVDLLIVRELTGGLYFG-EPRERRGEGETEEVVDTLLYTRGEMRRIIRKAFELAMVRNKH-VTSVDKANVLESSR-MWREVANEVAQEFPEVTLEHMLVDN 224
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_STAAS (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain MSSA476) GN=leuB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11 Identity = 60/213 (28.17%), Postives = 99/213 (46.48%), Query Frame = 1 Query: 160 PGDGIGPEIAES----VKQVFRTAEVPVEWEEH-YVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMA-----TPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKT-------RYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVID 747 PGDGIGPEI ++ + + E H + G ID + LT ++L + +R L G + P + + L L LRK LNL+AN+RP + G + R + +L+ +RE T G Y G TR+ R+ AF A + R +++++ K N++ + L+ K EV++ YPE+T +++D Sbjct: 9 PGDGIGPEILNGSLSLLEIISNKYNFNYQIEHHEFGGASIDTFGEP-LTEKTLNACKRADAILLGAIGGPKWTDPNNRPEQGL-LKLRKSLNLFANIRPTTVVKGASSLSPLKEERVEGTDLVIVRELTSGIYFGEPRHFNNHEALDSLTYTREEIERIVHVAFKLAASR-RGKLTSVDKENVLASSK-LWRKVVNEVSQLYPEVTVNHLLVD 217
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_STAAN (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain N315) GN=leuB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11 Identity = 60/213 (28.17%), Postives = 99/213 (46.48%), Query Frame = 1 Query: 160 PGDGIGPEIAES----VKQVFRTAEVPVEWEEH-YVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMA-----TPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKT-------RYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVID 747 PGDGIGPEI ++ + + E H + G ID + LT ++L + +R L G + P + + L L LRK LNL+AN+RP + G + R + +L+ +RE T G Y G TR+ R+ AF A + R +++++ K N++ + L+ K EV++ YPE+T +++D Sbjct: 9 PGDGIGPEILNGSLSLLEIISNKYNFNYQIEHHEFGGASIDTFGEP-LTEKTLNACKRADAILLGAIGGPKWTDPNNRPEQGL-LKLRKSLNLFANIRPTTVVKGASSLSPLKEERVEGTDLVIVRELTSGIYFGEPRHFNNHEALDSLTYTREEIERIVHVAFKLAASR-RGKLTSVDKENVLASSK-LWRKVVNEVSQLYPEVTVNHLLVD 217
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_STAAM (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=leuB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11 Identity = 60/213 (28.17%), Postives = 99/213 (46.48%), Query Frame = 1 Query: 160 PGDGIGPEIAES----VKQVFRTAEVPVEWEEH-YVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMA-----TPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKT-------RYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVID 747 PGDGIGPEI ++ + + E H + G ID + LT ++L + +R L G + P + + L L LRK LNL+AN+RP + G + R + +L+ +RE T G Y G TR+ R+ AF A + R +++++ K N++ + L+ K EV++ YPE+T +++D Sbjct: 9 PGDGIGPEILNGSLSLLEIISNKYNFNYQIEHHEFGGASIDTFGEP-LTEKTLNACKRADAILLGAIGGPKWTDPNNRPEQGL-LKLRKSLNLFANIRPTTVVKGASSLSPLKEERVEGTDLVIVRELTSGIYFGEPRHFNNHEALDSLTYTREEIERIVHVAFKLAASR-RGKLTSVDKENVLASSK-LWRKVVNEVSQLYPEVTVNHLLVD 217 The following BLAST results are available for this feature:
BLAST of CN188827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188827 ID=CN188827; Name=CN188827; organism=Citrus sinensis; type=EST; length=751bpback to top |