CN188827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_ARCFU (3-isopropylmalate dehydrogenase OS=Archaeoglobus fulgidus GN=leuB PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.109e-34 Identity = 79/198 (39.90%), Postives = 119/198 (60.10%), Query Frame = 1 Query: 154 LFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVID 747 + PGDGIG E+ E+ + ++P E+ + G E + L E+LE+ R++ L G G+ + + LR+EL +ANVRP ++ G + Y ++++ +RENTE Y G E V E++++ITR+AS R+A YAF AK GR++V+A+HKAN+M+KT GLF CREVA+ YPEI Y + ID Sbjct: 6 VIPGDGIGKEVMEAAMLILEKLDLPFEYSYYDAGDEALEKYGKALPDETLEACRKSDAVLFGAA----GETAADVIVRLRRELGTFANVRPAKAIEGIECLYPGLDIVVVRENTECLYMGFEFGF-GDVTEAIRVITREASERIARYAFELAKREGRKKVTALHKANVMKKTCGLFRDVCREVAKDYPEIQYNDYYID 198
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: IDH4_ARATH (Putative isocitrate dehydrogenase [NAD] subunit-like 4 OS=Arabidopsis thaliana GN=IDH4 PE=5 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.974e-32 Identity = 76/191 (39.79%), Postives = 120/191 (62.83%), Query Frame = 1 Query: 172 IGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKI-ITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQK-TDGLFLKCCREVAEKYPEITYEEV 738 I + +V QV + PV +E + I + + LTWE ++S+R+NKV L G + + G RKEL+L+A++ C++L G +R+++V+++ IRENTEGEY+G EH+VV GV+ES ++ +T+ S R+A+YAF YA R++V+A+H +K D FL+ C+EVA+ YP ITY E+ Sbjct: 8 IDSNVTNAVHQVMDAMQAPVYFETYI----IKGKNMNHLTWEVVDSIRKNKVCLNGRVNNSLCGG-------ARKELDLFASLVDCFNLNGQPSRHENVDIVVIRENTEGEYAGREHEVVPGVIESFQVTMTKFWSDRIAKYAFEYAHFSKRKKVTAVHNNGKYEKLADAFFLESCQEVAKMYPNITYNEI 187
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_SULTO (3-isopropylmalate dehydrogenase OS=Sulfolobus tokodaii GN=leuB PE=1 SV=3) HSP 1 Score: 135.191 bits (339), Expect = 3.723e-31 Identity = 77/205 (37.56%), Postives = 119/205 (58.05%), Query Frame = 1 Query: 145 TATLFPGDGIGPEIAESVKQVFRTAE----VPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVID 747 T L GDGIGPEI K++ +P+E+ E G R L +SL+ + + + LKGP +G+ + + LR+ ++YAN+RP S+PG T+Y +V+++ +RENTE Y G EH V GV +KIITR AS R+A+ ++A R++V+ +HKAN+M+ TDGLF + CR V + ++ Y E+ +D Sbjct: 4 TVALIQGDGIGPEIVSKSKRILAKINELYSLPIEYIEVEAGDRALARYGEALPKDSLKIIDKADIILKGP----VGESAADVVVKLRQIYDMYANIRPAKSIPGIDTKYGNVDILIVRENTEDLYKGFEHIVSDGVAVGMKIITRFASERIAKVGLNFA-LRRRKKVTCVHKANVMRITDGLFAEACRSVLK--GKVEYSEMYVD 201
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_METTH (3-isopropylmalate dehydrogenase OS=Methanobacterium thermoautotrophicum GN=leuB PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.415e-30 Identity = 73/198 (36.87%), Postives = 116/198 (58.59%), Query Frame = 1 Query: 154 LFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVID 747 + PGDGIG E+ E+ + T ++ +E+ G RT + L E+LE+V + L G G+ + + LR+E +L+AN+RP SLPG Y D++ + +RENTE Y G E G V +IITR AS R++++AF YA+ G ++V+A+HKAN+++KTDG+F +VA +YP++ + +D Sbjct: 8 VIPGDGIGVEVMEAALHILNTLDLDLEFIHADAGDACLKRTGTALPEETLEAVGEARATLFGAA----GESAADVIVRLRREFDLFANLRPVKSLPGVPCLYPDLDFVIVRENTEDLYVGDEEYTPEGAVAK-RIITRTASRRISQFAFQYAQKEGMQKVTAVHKANVLKKTDGIFRDEFYKVASEYPQMEATDYYVD 200
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_SULSO (3-isopropylmalate dehydrogenase OS=Sulfolobus solfataricus GN=leuB PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.761e-26 Identity = 68/202 (33.66%), Postives = 113/202 (55.94%), Query Frame = 1 Query: 154 LFPGDGIGPEIAESVKQVFRTA----EVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVID 747 + PGDGIGPE+ E K++ + ++ E G + L +L+ + + + LKGP +G+ + + LR+ ++YAN+RP SLP +++Y +V+L+ +RENTE Y G E GV ++K+ T AS R+ A +YA R +V+ +HKAN+M+ TDGLF CRE+ + ++ +EE+ +D Sbjct: 7 VIPGDGIGPELYEGSKRIIAKLIEKYNLDIDLIEVEAGDVALNKYGEALPRHTLDVIEKADMILKGP----VGETAMDVVVKLRQMYDMYANIRPAKSLPNVQSKYPNVDLVIVRENTEDLYKGFEFVTSTGVTIAIKVTTEFASKRIVNVALNYALMR-RRKVTCVHKANVMRVTDGLFASVCREILK--GKVNFEEMYVD 201
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: IDH_ARCFU (Isocitrate dehydrogenase [NADP] OS=Archaeoglobus fulgidus GN=icd PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.052e-25 Identity = 74/214 (34.58%), Postives = 113/214 (52.80%), Query Frame = 1 Query: 157 FPGDGIGPEIAESVKQVFRTAE----VPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKT---RYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKI----------------------ITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEK 711 F GDGIG ++ + +V A V W + Y G + ++L ++L +++ +V LKGP+ TP+G G+RSLN+T+R+ L+LYANVRP Y L G + + VN + RENTE Y+G+E RG E+LK+ I+ A+ R+ A YA + R+ V+ +HK NIM+ T+G F EVA++ Sbjct: 33 FEGDGIGKDVVPAAIRVLDAAADKIGKEVVWFQVYAGEDAYKLYGNYLPDDTLNAIKEFRVALKGPLTTPVGGGYRSLNVTIRQVLDLYANVRPVYYLKGVPSPIKHPEKVNFVIFRENTEDVYAGIEWP--RGSEEALKLIRFLKNEFGVTIREDSGIGIKPISEFATKRLVRMAIRYAIENNRKSVTLVHKGNIMKYTEGAFRDWGYEVAKQ 244
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_METJA (3-isopropylmalate/3-methylmalate dehydrogenase OS=Methanocaldococcus jannaschii GN=leuB PE=1 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 5.206e-25 Identity = 70/199 (35.18%), Postives = 109/199 (54.77%), Query Frame = 1 Query: 163 GDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYA---KTHGRE-RVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVID 747 GDGIG E+ + QV +P E+ G E+ RT L E++E+ L G G+ + + LR L+ YAN+RP + G K D++ + +RENTEG Y G+E ++ G+ + ++IT +A R+ +AF+ A K G+E +V+ HKAN+++ TDGLF K +VAE+Y +I E+ ID Sbjct: 9 GDGIGKEVVPATIQVLEATGLPFEFVYAEAGDEVYKRTGKALPEETIETALDCDAVLFGAA----GETAADVIVKLRHILDTYANIRPVKAYKGVKCLRPDIDYVIVRENTEGLYKGIEAEIDEGITIATRVITEKACERIFRFAFNLARERKKMGKEGKVTCAHKANVLKLTDGLFKKIFYKVAEEYDDIKAEDYYID 203
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: IDH_BACSU (Isocitrate dehydrogenase [NADP] OS=Bacillus subtilis GN=icd PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.800e-25 Identity = 70/216 (32.41%), Postives = 110/216 (50.93%), Query Frame = 1 Query: 163 GDGIGPEIAESVKQVFRTA-------EVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPC---YSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESL-----------------------KIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEK 711 GDG GP+I + +V A E + W+E Y G + +T +L E+L+ +R + +KGP+ TP+G G RSLN+ LR+EL+L+ +RP +P R +D +++ RENTE Y+G+E+ V+ L K ++ + + R+ A YA HGR+ V+ +HK NIM+ T+G F E+AEK Sbjct: 27 GDGTGPDIWNAASKVLEAAVEKAYKGEKKITWKEVYAGEKAYNKTGEWLPAETLDVIREYFIAIKGPLTTPVGGGIRSLNVALRQELDLFVCLRPVRYFTGVPSPVKRPEDTDMVIFRENTEDIYAGIEYAKGSEEVQKLISFLQNELNVNKIRFPETSGIGIKPVSEEGTSRLVRAAIDYAIEHGRKSVTLVHKGNIMKFTEGAFKNWGYELAEK 242
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: IDH_STRSL (Isocitrate dehydrogenase [NADP] OS=Streptococcus salivarius GN=icd PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.675e-23 Identity = 77/236 (32.63%), Postives = 122/236 (51.69%), Query Frame = 1 Query: 163 GDGIGPEIAESVKQVF-RTAEVP------VEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKT---RYDDVNLITIRENTEGEYSGLEHQV----VRGVVE-------------------SLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVA-EKYPE------ITYEEVVIDN 750 GDG+G +I ++ + +F + EV +EW+E G + +T +L E+LE++R + V +KGP+ TP+G G RSLN+ LR+EL+LYA VRP G + + N+ RENTE Y+G+E + V+ V+E +K I+ + S R+ A YA + ++V+ +HK NI + T+G F K EVA E Y E + +++ DN Sbjct: 25 GDGVGHDIWKNAQAIFDKAVEVAYEGKRHIEWQELLAGKKAYDKTGEWLPKETLEAIRESLVAIKGPLETPVGGGIRSLNVALRQELDLYACVRPVRYFDGVASPLKEPEKTNITIFRENTEDIYAGIEWEAGTADVKRVIEFLQTEMNVNKIRFPESSSIGIKPISIEGSKRLIRSAIDYALKNNLKKVTLVHKGNIQKFTEGGFRKWGYEVAQEDYKEELLAGRLEINDIIADN 260
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: IDH_STAES (Isocitrate dehydrogenase [NADP] OS=Staphylococcus epidermidis (strain ATCC 12228) GN=icd PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.675e-23 Identity = 67/206 (32.52%), Postives = 111/206 (53.88%), Query Frame = 1 Query: 163 GDGIGPEIAESVKQVFRTA-------EVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPC---YSLPGYKTRYDDVNLITIRENTEGEYSGLEHQ----VVRGVVE-------------------SLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLF 681 GDGIGP+I ++ +V A E +EW+E G + T +L E+LE+++ + +KGP+ TPIG G RSLN+ LR+EL+L+ +RP +P R +DV+++ RENTE Y+G+E + V+ V++ +K ++++ + R+ A YA + R+ V+ +HK NIM+ T+G F Sbjct: 26 GDGIGPDIWKAASRVIDAAVEKAYNGEKRIEWKEVLAGQKAYDETGEWLPQETLETIKEYLIAVKGPLTTPIGGGIRSLNVALRQELDLFTCLRPVRWFKGVPSPVKRPEDVDMVIFRENTEDIYAGIEFKQGTSEVKKVIDFLQNEMGATNIRFPETSGIGIKPVSKEGTERLVRAAIQYALDNNRKSVTLVHKGNIMKFTEGSF 231 The following BLAST results are available for this feature:
BLAST of CN188827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188827 ID=CN188827; Name=CN188827; organism=Citrus sinensis; type=EST; length=751bpback to top |