CN188827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_NOCFA (3-isopropylmalate dehydrogenase OS=Nocardia farcinica GN=leuB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.088e-14 Identity = 60/208 (28.85%), Postives = 95/208 (45.67%), Query Frame = 1 Query: 154 LFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNK---VGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSG----LEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVID 747 + PGDGIGPE+ +V VE E+ +G + T L L +R + +G G + P G R L L R EL+ + N+RP G ++ D++ + +RE TEG Y+G + + V + TR RV YAF A+ R+ ++ +HK N++ L+ + EV ++PE+T ID Sbjct: 5 VIPGDGIGPEVIAEALKVLDVVVPGVEKTEYDLGAKRYHATGEILPDSVLPELREHDAILLGAIGDPSVPSGVLERGLLLRTRFELDHHVNLRPSRLFTGVRSPLAGAPDIDFVVVREGTEGPYTGTGGAIRVRTPHEVATEVSTNTRFGIERVVRYAFAKAQAR-RKHLTLVHKTNVLTFAGSLWQRTVDEVGAEFPEVTVAYQHID 211
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_STRCO (3-isopropylmalate dehydrogenase OS=Streptomyces coelicolor GN=leuB PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.421e-14 Identity = 60/215 (27.91%), Postives = 103/215 (47.91%), Query Frame = 1 Query: 142 ITATLFPGDGIGPEI-AESVKQVFRTA--EVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNK---VGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVID 747 + + PGDGIG E+ AE +K + +V +E +E G T LT L++++ + +G G + P G R L LR + + N+RP LPG T +++ + +RE TEG Y+G + +G V + + T RV AF A+ R++++ +HK N++ L+ +VA +YPE+T + + +D Sbjct: 5 LNLAVIPGDGIGQEVVAEGLKVLSAVLPQDVKLETKEFDFGARRYHATGETLTDADLDALKAHDAILLGAIGDPSVPSGVLERGFLLKLRFAFDHHVNLRPSKLLPGVATPLAGQPEIDFVVVREGTEGPYTGNGGTIRKGTEHEVATEVSVNTAYGVERVVRDAFARAQARPRKKLTLVHKNNVLTFAGHLWTNIFNKVAAEYPEVTTDYLHVD 219
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_STRAW (3-isopropylmalate dehydrogenase OS=Streptomyces avermitilis GN=leuB PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.424e-14 Identity = 58/215 (26.98%), Postives = 102/215 (47.44%), Query Frame = 1 Query: 142 ITATLFPGDGIGPEIAESVKQVFRTA---EVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNK---VGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVID 747 I + PGDGIG E+ +V A +V +E +E G T LT L++++++ +G G + P G R L LR + + N+RP LPG +T +++ + +RE TEG Y+G + G V + + T RV A+ A+ R++++ +HK N++ L+ +V E++P++T E + +D Sbjct: 5 INLAVIPGDGIGQEVVAQGLKVLSAALPSDVKLETKEFDFGARRYHATGETLTDADLDALKQHDAILLGAIGDPSVPSGVLERGFLLKLRFAFDHHVNLRPSKLLPGVETPLAGQPEIDFVVVREGTEGPYTGNGGTIRTGTPHAVATEVSLNTAFGIERVVRDAYARAQARPRKKLALVHKNNVLVHAGHLWTDIFNKVGEEFPDVTTEYMHVD 219
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_BIFLI (3-isopropylmalate dehydrogenase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=leuB PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.424e-14 Identity = 62/211 (29.38%), Postives = 96/211 (45.50%), Query Frame = 1 Query: 154 LFPGDGIGPEIAESVKQVFRTAEVPV---EWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKG---HRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVID 747 + PGDGIG E+ ++ A V E+E +G E R + L + ++ N L G + P K R L L LR +L+ Y N+RP G + D++ + +RE TEG Y G V R V + I T RV YAF A ++ V+ +HK N++ ++ + +V E+YPE+T++ ID Sbjct: 9 VIPGDGIGKEVTPWAQKALEKAAEGVADFEYENFDLGAERYLRDGAILPEDEEGRIKANDAILLGAVGDPRIKAGILERGLLLKLRFDLDQYVNLRPSKLYKGVTSPLANPGDIDFVVVREGTEGLYCGAGGAVRRNTPQEVATEVSINTAYGVERVVRYAFKLAMKR-KKHVTLVHKKNVLVNAGDMWQRIVDKVGEEYPEVTHDYQHID 218
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: DLPA_LEGPH (Protein dlpA OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=dlpA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.424e-14 Identity = 61/237 (25.74%), Postives = 108/237 (45.57%), Query Frame = 1 Query: 139 PITATLFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFL---TWESLESVRRNKVGL---------KGPMATPIGKGHR---SLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESL-------------------KIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVID 747 PI + PGDGIG E+ E+ VF +VPV +G E + + + TW+ + S +G K ++ + K + S + LR+ L+L+ANVRPC+S+ + N IREN+EG Y G ++ + + SL ++ ++ R+ ++AF +A G RV+ K N+++++ K A++YP+I + + +D Sbjct: 6 PIKIAVLPGDGIGIEVTEATLPVFEVLDVPVILNYGDIGWEFWKKEGAAIPSRTWQLIASSDTVLLGAITSKPQREAKQELSNALKKSNPYYVSPVIQLRQGLDLFANVRPCFSIDDQSKPF---NFCIIRENSEGLYCGFDYFPLPKAIHSLLAESQHWQTIPADEASCALRLQSKSGLTRLFDFAFKHAMQTGMPRVTLADKPNVLRESGEFTRKIFESTAQRYPKIQADILNVD 239
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_MYCLE (3-isopropylmalate dehydrogenase OS=Mycobacterium leprae GN=leuB PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.135e-14 Identity = 58/204 (28.43%), Postives = 94/204 (46.08%), Query Frame = 1 Query: 163 GDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNK---VGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYP--EITYEEV 738 GDGIGPE+ ++ V+ + +G T L L +R + +G G + P G R L L LR EL+ + N+RP PG + D++ + +RE TEG Y+G + G V + + T RV + AF A+ R+ ++ +HK N++ L+ + +EV EKYP E+ Y+ + Sbjct: 8 GDGIGPEVVAQAVKILDVVLPGVQKTTYDLGARRYHTTGELLPESVLAELREHDAILLGAVGDPSVPSGVLERGLLLRLRFELDHHINLRPARLYPGVNSLLAGKPDIDFVVVREGTEGPYTGTGGAIRVGTPNEVATEVSVNTAFGVRRVVQDAFERARQR-RKHLTLVHKNNVLTYAGTLWCRIVQEVGEKYPDVEVVYQHI 210
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_MYCLB (3-isopropylmalate dehydrogenase OS=Mycobacterium leprae (strain Br4923) GN=leuB PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.135e-14 Identity = 58/204 (28.43%), Postives = 94/204 (46.08%), Query Frame = 1 Query: 163 GDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNK---VGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYP--EITYEEV 738 GDGIGPE+ ++ V+ + +G T L L +R + +G G + P G R L L LR EL+ + N+RP PG + D++ + +RE TEG Y+G + G V + + T RV + AF A+ R+ ++ +HK N++ L+ + +EV EKYP E+ Y+ + Sbjct: 8 GDGIGPEVVAQAVKILDVVLPGVQKTTYDLGARRYHTTGELLPESVLAELREHDAILLGAVGDPSVPSGVLERGLLLRLRFELDHHINLRPARLYPGVNSLLAGKPDIDFVVVREGTEGPYTGTGGAIRVGTPNEVATEVSVNTAFGVRRVVQDAFERARQR-RKHLTLVHKNNVLTYAGTLWCRIVQEVGEKYPDVEVVYQHI 210
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: IDH_SYNY3 (Isocitrate dehydrogenase [NADP] OS=Synechocystis sp. (strain PCC 6803) GN=icd PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.135e-14 Identity = 61/215 (28.37%), Postives = 96/215 (44.65%), Query Frame = 1 Query: 163 GDGIGPEIAESVKQVFRTA-------EVPVEWEEHYVGTEIDPR--TQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSGLE----------------------------HQVVRGVVESLKIITRQASLRVAEYAFHYAK--THGRERVSAIHKANIMQKTDGLF 681 GDG G +I + + V A + W + Y G E T ++L +++ V +KGP+ TP+G G RSLN+ LR+ +LY VRPC PG + + + +++I RENTE Y G+E Q+ +K I++ S R+ A +AK ++ V+ +HK NIM+ T+G F Sbjct: 34 GDGTGVDIWPATELVINAAIAKAYGGREEINWFKVYAGDEACELYGTYQIFPEDTLTAIKEYGVAIKGPLTTPVGGGIRSLNVALRQIFDLYTCVRPCRYYPGTPSPHKTPEKLDIIVYRENTEDIYLGIEWAEGTEGAKKLIAYLNDELIPTTPALGKKQIRLDSGIGIKPISKTGSQRLVRRAILHAKRLPKAKQMVTLVHKGNIMKFTEGPF 248
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_LACLA (3-isopropylmalate dehydrogenase OS=Lactococcus lactis subsp. lactis GN=leuB PE=3 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 5.400e-14 Identity = 61/216 (28.24%), Postives = 102/216 (47.22%), Query Frame = 1 Query: 163 GDGIGPEIAESVKQVFRTAEVPVEWE-----EHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLN----------LTLRKELNLYANVRPCYSLPGYK-----TRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDN 750 GDGIGPEI + V + +++E + + G ID L E+L++V+ L + GH N L LRKEL LYANVRP P K ++V+ + IRE T G Y G +H++ + + R+ +AF A++ R+ ++++ K N++ T L+ K E+A++YP++ E ++D+ Sbjct: 10 GDGIGPEIMSAGLSVLKAVSKKIDFEYELEAKDFGGIAIDKHGHP-LPEETLQAVKNADAILLAAI------GHPKYNNAKVRPEQGLLALRKELGLYANVRPLKIYPALKKLSPIRNVENVDFLVIRELTGGIYFG-QHELADDKARDVNDYSADEIRRILHFAFKSAQSRPRKLLTSVDKQNVL-ATSKLWRKMADEIADEYPDVRLEHQLVDS 216
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_CORJK (3-isopropylmalate dehydrogenase OS=Corynebacterium jeikeium (strain K411) GN=leuB PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.053e-14 Identity = 60/206 (29.13%), Postives = 93/206 (45.15%), Query Frame = 1 Query: 163 GDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKG----PMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRY---DDVNLITIRENTEGEYSGLEHQVVRG----VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVID 747 GDGIG E+ +V VE ++ +G R LT E L+S+R + L G P P G R L L LR +L+ N+RP PG + D++ + +RE TEG Y G + G V + T RV AF A++ R++++ +HK N++ L+ + V ++YPE+ + ID Sbjct: 8 GDGIGTEVTAEALKVLHALRDDVETTDYDLGARRYLRNGELLTDEDLDSLREHDAILLGAIGDPRTVPAGVLERGLLLPLRFKLDHAVNLRPSKLYPGSSSPLANPGDIDFVVVREGTEGLYCGNGGTLRAGTDYEVASEVSQNTYYGVERVVRDAFERAQSR-RKKLTWVHKTNVLVNAGSLWQRAIETVGQEYPEVQVDYNHID 212 The following BLAST results are available for this feature:
BLAST of CN188827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188827 ID=CN188827; Name=CN188827; organism=Citrus sinensis; type=EST; length=751bpback to top |