CN188826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH3A_RAT (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus GN=Idh3a PE=1 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.639e-65 Identity = 121/200 (60.50%), Postives = 159/200 (79.50%), Query Frame = -1 Query: 248 VVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 847 +V GVV+S+K+IT AS R+AE+AF YA+ + R V+A+HKANIM+ +DGLFL+ CREVAE +I + E+ +D C+ +V++P+ FDVLVMPNLYGDI+SDLCAGLIGGLG+T S NIG G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A +I+ A +TI +GK T DLGG+S SDFT+ IC Sbjct: 160 IVDGVVQSIKLITEGASKRIAEFAFEYARNNHRSNVTAVHKANIMRMSDGLFLQKCREVAENCKDIKFNEMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTQSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAAKIEAACFATIKDGKSLTKDLGGNSKCSDFTEEIC 359
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH3A_CAEEL (Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Caenorhabditis elegans GN=F43G9.1 PE=1 SV=3) HSP 1 Score: 240.35 bits (612), Expect = 9.945e-63 Identity = 115/200 (57.50%), Postives = 157/200 (78.50%), Query Frame = -1 Query: 248 VVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 847 +V GVV+S+K+IT AS VA +AF YA+ +GR+ V+A+HKANIM+++DGLFL CRE A YP+I ++E +D C+ +V++P+ +DVLVMPNLYGDI+SDLCAGL+GGLG+TPS NIG+G A+ E+VHG+APDIAG++ ANPTALLLS+V MLR++ L A RI+ A+ IA+G+ +T DLGG+ T S FT +C Sbjct: 153 IVPGVVQSIKLITETASRNVASFAFEYARQNGRKVVTAVHKANIMRQSDGLFLSICREQAALYPDIKFKEAYLDTVCLNMVQDPSQYDVLVMPNLYGDILSDLCAGLVGGLGVTPSGNIGKGA-AVFESVHGTAPDIAGQDKANPTALLLSAVMMLRYMNLPQHAARIEKAVFDAIADGRAKTGDLGGTGTCSSFTADVC 351
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDHB_DICDI (Isocitrate dehydrogenase [NAD] regulatory subunit B, mitochondrial OS=Dictyostelium discoideum GN=idhB PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 6.033e-60 Identity = 109/200 (54.50%), Postives = 151/200 (75.50%), Query Frame = -1 Query: 239 GVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 838 GVV+SLKIIT++AS R+A YAF YAK +GR++V+A+HKANI ++TDGLFL C ++A++YPEI +E +IDNCCM LVK+P +DV+V PNLYG+I+S++ A L+GG GL N+GEG I H A DIAGK+ ANPT LLL+SV ML+HL L++ A +++NA+ + I EG T+D+GG S+T FT A+ D++ Sbjct: 157 GVVQSLKIITKEASERIARYAFEYAKANGRKKVTAVHKANIQKQTDGLFLATCTQIAKEYPEIKFENTIIDNCCMQLVKSPEQYDVMVTPNLYGNIVSNIGAALVGGPGLAGGANVGEGSIIFEMGAHHVAADIAGKDKANPTGLLLASVMMLKHLGLNEHATKVENAVKAVIKEGTL-TSDIGGKSSTKQFTGAVIDYI 355
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH2_SCHPO (Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial OS=Schizosaccharomyces pombe GN=idh2 PE=1 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.994e-59 Identity = 116/206 (56.31%), Postives = 151/206 (73.30%), Query Frame = -1 Query: 239 VVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFD--VLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEG-KYRTADLGGSSTTSDFTKAICDHL 847 V+ GVV+S+K+ITR AS RV YAF YA+ G+ ++ +HKA IM+ DGLFL+C +E+A +YP+I E ++DN C+ +V +P ++ V+VMPNLYGDI+SD+CAGLIGGLGLTPS NIG ++ EAVHG+APDIAGK LANPTALLLSSV ML+H+ L+D A RI++AI T+A RT DLGG S +T AI L Sbjct: 173 VIPGVVQSIKLITRAASERVIRYAFQYARQTGKNNITVVHKATIMRMADGLFLECAKELAPEYPDIELREEILDNACLKIVTDPVPYNNTVMVMPNLYGDIVSDMCAGLIGGLGLTPSGNIGNQA-SIFEAVHGTAPDIAGKGLANPTALLLSSVMMLKHMNLNDYAKRIESAIFDTLANNPDARTKDLGGKSNNVQYTDAIISKL 377
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH3B_BOVIN (Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Bos taurus GN=IDH3B PE=2 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 6.903e-56 Identity = 106/201 (52.74%), Postives = 138/201 (68.66%), Query Frame = -1 Query: 239 RGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 841 RGV+E LKI+TR S R+A++AF YA GR +V+A+HKANIM+ DGLFL+CC EVAE YP+I +E+++IDNCCM LV+NP FDVLVMPNLYG+II +L AGL+GG G+ P + G+N+ANPTA+LLS+ MLRHL L ++ I A+ I GK RT D+GG STT+DF K++ HL Sbjct: 180 RGVIECLKIVTRTKSQRIAKFAFDYATKKGRGKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFEKMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLRHLNLEHHSNMIAEAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHL 380
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH3B_MACFA (Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Macaca fascicularis GN=IDH3B PE=2 SV=2) HSP 1 Score: 217.238 bits (552), Expect = 9.015e-56 Identity = 106/201 (52.74%), Postives = 138/201 (68.66%), Query Frame = -1 Query: 239 RGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 841 RGV+E LKI+TR S R+A++AF YA GR +V+A+HKANIM+ DGLFL+CC EVAE YP+I +E ++IDNCCM LV+NP FDVLVMPNLYG+II +L AGL+GG G+ P + G+N+ANPTA+LLS+ MLRHL L ++ I +A+ I GK RT D+GG STT+DF K++ HL Sbjct: 180 RGVIECLKIVTRAKSQRIAKFAFDYATKKGRSKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLRHLNLEYHSNMIADAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHL 380
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH3B_RAT (Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus GN=Idh3B PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.177e-55 Identity = 106/201 (52.74%), Postives = 137/201 (68.16%), Query Frame = -1 Query: 239 RGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 841 RGV+E LKI+TR S R+A++AF YA GR +V+A+HKANIM+ DGLFL+CC EVAE YP+I +E ++IDNCCM LV+NP FDVLVMPNLYG+II +L AGL+GG G+ P + G+N+ANPTA+LLS+ MLRHL L + I +A+ I GK RT D+GG STT+DF K++ HL Sbjct: 180 RGVIECLKIVTRTKSQRIAKFAFDYATKKGRSKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLRHLNLEYHSSMIADAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHL 380
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH3B_HUMAN (Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Homo sapiens GN=IDH3B PE=1 SV=2) HSP 1 Score: 216.083 bits (549), Expect = 2.008e-55 Identity = 106/201 (52.74%), Postives = 137/201 (68.16%), Query Frame = -1 Query: 239 RGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 841 RGV+E LKI+TR S R+A++AF YA GR +V+A+HKANIM+ DGLFL+CC EVAE YP+I +E ++IDNCCM LV+NP FDVLVMPNLYG+II +L AGL+GG G+ P + G+N+ANPTA+LLS+ MLRHL L + I +A+ I GK RT D+GG STT+DF K++ HL Sbjct: 180 RGVIECLKIVTRAKSQRIAKFAFDYATKKGRGKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLRHLNLEYHSSMIADAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHL 380
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH3B_PONAB (Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Pongo abelii GN=IDH3B PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.623e-55 Identity = 106/201 (52.74%), Postives = 136/201 (67.66%), Query Frame = -1 Query: 239 RGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 841 RGV+E LKI+TR S R+A++AF YA GR +V A+HKANIM+ DGLFL+CC EVAE YP+I +E ++IDNCCM LV+NP FDVLVMPNLYG+II +L AGL+GG G+ P + G+N+ANPTA+LLS+ MLRHL L + I +A+ I GK RT D+GG STT+DF K++ HL Sbjct: 180 RGVIECLKIVTRAKSQRIAKFAFDYATKKGRSKVIAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLRHLNLEYHSSMIADAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHL 380
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH3G_BOVIN (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Bos taurus GN=IDH3G PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.426e-55 Identity = 105/202 (51.98%), Postives = 140/202 (69.31%), Query Frame = -1 Query: 239 VRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 844 V GVVESLKIIT+ SLR+AEYAF A+ GR++V+A+HKANIM+ DGLFL+CCREVA +YP+IT+E +++DN M LV P FDV+VMPNLYG+I++++CAGL+GG GL N G A + IA KN+ANPTA LL+S ML HL+LH A I+ A+L+++ T D+GG TTS+ + I H+ Sbjct: 181 VAGVVESLKIITKAKSLRIAEYAFQLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAVLASMDNENMHTPDIGGQGTTSEAIQDIIRHI 382 The following BLAST results are available for this feature:
BLAST of CN188826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188826 ID=CN188826; Name=CN188826; organism=Citrus sinensis; type=EST; length=847bpback to top |