CN188826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_THETN (3-isopropylmalate dehydrogenase OS=Thermoanaerobacter tengcongensis GN=leuB PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.506e-31 Identity = 71/170 (41.76%), Postives = 110/170 (64.71%), Query Frame = -1 Query: 287 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLG 793 R+A AF A R++++++ KAN+++ + L+ K EVA++YPE+ + +DNC M LVKNP FDV++ N++GDI+SD A ++G +G+ PS ++ + L E +HGSAPDIAGK +ANP A +LS ML++ + A I+ A+ + EG +RTADLG Sbjct: 169 RIAVIAFE-AALRRRKKITSVDKANVLESSR-LWRKTVEEVAKRYPEVELNHMYVDNCAMQLVKNPFQFDVILTNNMFGDILSDEAAQIVGSIGILPSASLRGDRVGLYEPIHGSAPDIAGKKIANPLATILSVAMMLQYSFGEEEAAQDIRKAVERALEEG-FRTADLG 335
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_THETH (3-isopropylmalate dehydrogenase OS=Thermus thermophilus GN=leuB PE=1 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 4.506e-31 Identity = 79/186 (42.47%), Postives = 113/186 (60.75%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 793 RVA AF A+ R+ V ++ KAN+++ + + K EV YP++ E +D M LV++PA FDV+V N++GDI+SDL + L G LGL PS ++G G + E VHGSAPDIAGK +ANPTA +LS+ ML H L + A ++++A+ + E DLGGS+ T FT + HL Sbjct: 164 RVARVAFEAARKR-RKHVVSVDKANVLEVGE-FWRKTVEEVGRGYPDVALEHQYVDAAAMHLVRSPARFDVVVTGNIFGDILSDLASVLPGSLGLLPSASLGR-GTPVFEPVHGSAPDIAGKGIANPTAAILSAAMMLEHAFGLVELARKVEDAVAKALLETP--PPDLGGSAGTEAFTATVLRHL 344
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_CORK4 (3-isopropylmalate dehydrogenase OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=leuB PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.506e-31 Identity = 74/187 (39.57%), Postives = 114/187 (60.96%), Query Frame = -1 Query: 287 VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI--ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIA--EGKYRTADLG 835 V + TR RV YAF A+ R++++ +HK N++ GL+ + +VA++Y ++T + ID + +V +P+ FDV+V NL+GDII+DL + GG+GL S NI G ++ E VHGSAPDIAGK +A+PTA +LS + RHL D+AD I+ A+ + +A +G RT ++G Sbjct: 148 VANETSVNTRYGVERVVRYAFDRAQER-RKKLTLVHKTNVLVYAGGLWQRTVDQVAQEYLDVTVDYCHIDAATIYMVTDPSRFDVIVTDNLFGDIITDLAGAVTGGIGLAASGNIDATGTNPSMFEPVHGSAPDIAGKGIADPTAAILSGALLFRHLGKTDEADAIEAAVRNDVASRDGSIRTEEVG 333
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_THET8 (3-isopropylmalate dehydrogenase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=leuB PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.884e-31 Identity = 79/186 (42.47%), Postives = 113/186 (60.75%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 793 RVA AF A+ R+ V ++ KAN+++ + + K EV YP++ E +D M LV++PA FDV+V N++GDI+SDL + L G LGL PS ++G G + E VHGSAPDIAGK +ANPTA +LS+ ML H L + A ++++A+ + E DLGGS+ T FT + HL Sbjct: 164 RVARVAFEAARKR-RKHVVSVDKANVLEVGE-FWRKTVEEVGRGYPDVALEHQYVDAMAMHLVRSPARFDVVVTGNIFGDILSDLASVLPGSLGLLPSASLGR-GTPVFEPVHGSAPDIAGKGIANPTAAILSAAMMLEHAFGLVELARKVEDAVAKALLETP--PPDLGGSAGTEAFTATVLRHL 344
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_VIBF1 (3-isopropylmalate dehydrogenase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=leuB PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.685e-31 Identity = 77/189 (40.74%), Postives = 116/189 (61.38%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSS---TTSDFTKAICDHL 793 R+A+ AF A+ + V +I KAN++Q + L+ + EVA+ YP++T + IDN M L+K+P+ FDV++ N++GDIISD CA + G +G+ PS ++ E L E GSAPDIAGKN+ANP A +LS+ MLR+ L + A I+ A+ ++ G+ TADL G TTS I +++ Sbjct: 175 RIAKIAFESARLRNKN-VYSIDKANVLQSSI-LWREVVEEVAKGYPDVTLNHMYIDNATMQLIKDPSQFDVMLCSNIFGDIISDECAMITGSMGMLPSASLNESNFGLYEPAGGSAPDIAGKNIANPVAQILSAALMLRYSLGEEEAAQSIEAAVSKALSAGEL-TADLAGDKPALTTSAMGDKIAEYI 360
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_METCA (3-isopropylmalate dehydrogenase OS=Methylococcus capsulatus GN=leuB PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.685e-31 Identity = 73/184 (39.67%), Postives = 113/184 (61.41%), Query Frame = -1 Query: 245 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 793 R+A AF A+ R R+ +I KAN+++ T+ L+ + EV + YP++ + +DN M LV+NP FDV++ N++GDI+SD A L G +G+ PS ++ E G + E +HGSAPDIAG+ +ANP A +LS MLR+ + A+RI A+ + + +G +RTAD+ T T A+ D Sbjct: 171 RIAHSAFQIARKRNR-RLCSIDKANVLECTE-LWREVVIEVGKDYPDVALSHMYVDNAAMQLVRNPKQFDVMLTDNMFGDILSDCAAMLTGSIGMLPSASLAESGKGMYEPIHGSAPDIAGRGIANPIATILSLAMMLRYSFDDAVSAERIGKAVQTALDQG-FRTADIASEGTVEVGTAAMGD 351
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_BUCUE (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Uroleucon erigeronensis GN=leuB PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.685e-31 Identity = 67/173 (38.73%), Postives = 113/173 (65.32%), Query Frame = -1 Query: 278 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSS 793 R+A AF A+ +++V ++ K+N++ K+ L+ + ++++ YP++ + IDN M ++K+P+ FDV++ NL+GDI+SD CA + G +G+ PS ++ E L E GSAPDIAGKN+ANP A +LS ++RH + L AD+I +++S + +G YRTAD+ +S Sbjct: 174 RIAHLAFQLARNR-KKKVCSLDKSNVL-KSSILWKEIVEKISKNYPDVHLSHLYIDNAIMQIIKDPSQFDVILCSNLFGDIVSDECAAITGSIGMLPSASLNEKNFGLYEPAGGSAPDIAGKNIANPIAQILSVSMLVRHGMNLKKIADKIDESVVSVLKQG-YRTADISNNS 343
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_SHIBS (3-isopropylmalate dehydrogenase OS=Shigella boydii serotype 4 (strain Sb227) GN=leuB PE=3 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 1.004e-30 Identity = 76/179 (42.46%), Postives = 113/179 (63.13%), Query Frame = -1 Query: 266 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL--GGSSTTSD 793 R+A AF A+ R +V++I KAN++Q + L+ + E+A +YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E GSAPDI GKN+ANP A +LS +LR+ L+ D A I+ AI + EG RT DL G ++ ++D Sbjct: 174 RIARIAFESARKR-RHKVTSIDKANVLQSSI-LWREIVNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDITGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEG-IRTGDLARGAAAVSTD 349
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_ANADE (3-isopropylmalate dehydrogenase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=leuB PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.004e-30 Identity = 74/186 (39.78%), Postives = 114/186 (61.29%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 793 RV E AF AK +++V+++ KAN+++ + L+ + + + P++ + +++D M LV +PA DV+V N++GDI++D + L G +G+ PS +IGE G L E +HGSAPDIAGK +ANP +LS+ +LRH L L +A I+ A+ TI +G RTADLGG +T I L Sbjct: 170 RVVELAFRIAKGR-KKKVTSVDKANVLESSR-LWRELATAIGQANPDVALDHMLVDTAAMRLVTSPATLDVVVTENMFGDILTDEASVLAGSMGMLPSASIGEQGPGLYEPIHGSAPDIAGKGIANPVGTVLSAALLLRHSLGLEPEAAAIERAVDQTITDG-CRTADLGGKLSTRAMADEILKRL 352
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_VIBPA (3-isopropylmalate dehydrogenase OS=Vibrio parahaemolyticus GN=leuB PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.311e-30 Identity = 76/189 (40.21%), Postives = 117/189 (61.90%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSS---TTSDFTKAICDHL 793 R+A+ AF A+ R++V +I KAN++Q + L+ + E+A+ YP++ + IDN M L+K+PA FDV++ N++GDIISD CA + G +G+ PS ++ E L E GSAPDIAGKN+ANP A +LS+ MLR+ L A I++A+ ++ G+ TADL TTS+ I +++ Sbjct: 175 RIAKIAFESARLR-RKKVCSIDKANVLQSSI-LWREVVEEIAKDYPDVELSHMYIDNATMQLIKDPAQFDVMLCSNIFGDIISDECAMITGSMGMLPSASLNESKFGLYEPAGGSAPDIAGKNIANPVAQILSAALMLRYSLGEEAAAQDIESAVSKALSAGEL-TADLASDKPALTTSEMGDKIAEYI 360 The following BLAST results are available for this feature:
BLAST of CN188826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188826 ID=CN188826; Name=CN188826; organism=Citrus sinensis; type=EST; length=847bpback to top |