CN188826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_PHOLL (3-isopropylmalate dehydrogenase OS=Photorhabdus luminescens subsp. laumondii GN=leuB PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.311e-30 Identity = 71/172 (41.28%), Postives = 111/172 (64.53%), Query Frame = -1 Query: 281 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGS 793 R+A AF A+ +V++I KAN++Q + L+ + E+A+ YP++ + IDN M L+K+P+ FDV++ N++GDI+SD CA + G +G+ PS ++ E G L E GSAPDIAGK +ANP A +LS+ +LR+ L +D A+ I+ A+ + +G YRT DL G+ Sbjct: 174 RIARIAFESARKRSN-KVTSIDKANVLQSSV-LWREVVTEIAKAYPDVEINHMYIDNATMQLIKDPSQFDVMLCSNIFGDILSDECAMITGSMGMLPSASLNEKGFGLYEPAGGSAPDIAGKGIANPIAQILSAALLLRYSLGHNDAANAIEQAVNYALEQG-YRTTDLAGN 342
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_DESVH (3-isopropylmalate dehydrogenase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=leuB PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.712e-30 Identity = 77/169 (45.56%), Postives = 106/169 (62.72%), Query Frame = -1 Query: 290 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADL 793 R+A AF A+ R RV ++ KAN++ T L+ + EVA YP++ + +DN M LV+ PA FDV+V NL+GDI+SD A + G +G+ PS ++G GG AL E +HGSAPDIAG++ ANP A +LS MLR L +AD I A+ +AEG YRT D+ Sbjct: 171 RIARVAFDTARARKR-RVCSVDKANVLA-TSRLWREVVEEVARDYPDVELSHMYVDNAAMQLVRWPAQFDVIVTGNLFGDILSDEAAVITGSIGMLPSASMGSGGPALFEPIHGSAPDIAGQDKANPIATILSVGMMLRLGFGLAAEADAIDAAVRRVLAEG-YRTGDI 336
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_NITMU (3-isopropylmalate dehydrogenase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=leuB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.236e-30 Identity = 70/169 (41.42%), Postives = 108/169 (63.91%), Query Frame = -1 Query: 290 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 793 R+A AF A+ R R+ ++ K N+++ T L+ E A +YP++ +++DN M LV+NP FDV+V N++GDI+SD + L G +G+ PS ++ E L E +HGSAPDIAGK++ANP A +LS MLR+ + ++A RI+ A+ +A+G YRTAD+ Sbjct: 167 RIARVAFQAARKRSR-RLCSVDKMNVLESTQ-LWRDVVTETAGEYPDVELSHMLVDNAAMQLVRNPRQFDVVVTGNMFGDILSDEASMLTGSIGMLPSASLDERNKGLYEPIHGSAPDIAGKDVANPLATVLSVAMMLRYTFDREEEASRIERAVKKVLADG-YRTADI 332
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_CORGL (3-isopropylmalate dehydrogenase OS=Corynebacterium glutamicum GN=leuB PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.920e-30 Identity = 71/175 (40.57%), Postives = 109/175 (62.29%), Query Frame = -1 Query: 317 VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI--ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIA 835 + + TR + RV YAF A++ R++++ +HK N++ GL+ + EVA++YPE+ + ID + LV +P+ FDV+V NL+GDI++D + GG+GL S NI G ++ E VHGSAPDIAG+ +A+PTA +LS+ +LRHL D A RI+ AI + +A Sbjct: 144 IANETSVNTRYGAERVIRYAFELAQSR-RKKLTLVHKTNVLVHGGGLWQRTVDEVAKEYPEVAVDYNHIDAATIYLVTDPSRFDVIVTDNLFGDILTDEAGAVSGGIGLAASGNIDATGTNPSMFEPVHGSAPDIAGQGIADPTAAILSAAMLLRHLGDEDNAVRIETAIAADVA 317
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_BUCDN (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Diuraphis noxia GN=leuB PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.920e-30 Identity = 71/190 (37.37%), Postives = 119/190 (62.63%), Query Frame = -1 Query: 239 LRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSST---TSDFTKAICDHL 796 +R+A AF A++ + ++ +I KAN+++ + L+ + EV+++YP++ + IDN CM ++K+P FDVL+ NL+GDIISD CA + G +G+ PS ++ E L E GSAPDI GKN+ANP A +LS ++R+ + L+ A++I NA+++ + +G Y+T D+ T++ I D L Sbjct: 173 VRIAHLAFKLARSR-KHKLCSIDKANVLESSI-LWREVVEEVSKEYPDVILSHLYIDNVCMQIIKDPNQFDVLLCSNLFGDIISDECAMITGSIGMLPSASLNEKNFGLYEPAGGSAPDIQGKNIANPIAQILSLSMLIRYSMNLNKIANKIDNAVINVLKKG-YKTMDISKDQNYLKTNEMGDVIADFL 359
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_SYNJB (3-isopropylmalate dehydrogenase OS=Synechococcus sp. GN=leuB PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.814e-30 Identity = 74/175 (42.29%), Postives = 109/175 (62.29%), Query Frame = -1 Query: 272 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTT 793 R+A AF A+ R ++ ++ KAN+++ + L+ + +A +YPE+ + IDN M LV+ P FDV++ NL+GDI+SD A L G +G+ PS ++G G L E VHGSAPDIAG++ ANP A +LS MLR+ L+ ADRI+ A+ + +A+G YRT DL T Sbjct: 179 RIARVAFELARKR-RRKLCSVDKANVLEVSQ-LWRERVNAIAAEYPEVELSHLYIDNAAMQLVRWPKQFDVILTGNLFGDILSDEAAMLTGSIGMLPSASLGSSGPGLYEPVHGSAPDIAGQDKANPIAQVLSGALMLRYSLDQPQAADRIEQAVEAVLAQG-YRTPDLYSEGMT 350
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_CORGB (3-isopropylmalate dehydrogenase OS=Corynebacterium glutamicum (strain R) GN=leuB PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.814e-30 Identity = 70/175 (40.00%), Postives = 109/175 (62.29%), Query Frame = -1 Query: 317 VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI--ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIA 835 + + TR + RV YAF A++ R++++ +HK N++ GL+ + EVA++YPE+ + ID + L+ +P+ FDV+V NL+GDI++D + GG+GL S NI G ++ E VHGSAPDIAG+ +A+PTA +LS+ +LRHL D A RI+ AI + +A Sbjct: 144 IANETSVNTRYGAERVIRYAFELAQSR-RKKLTLVHKTNVLVHGGGLWQRTVDEVAKEYPEVAVDYNHIDAATIYLITDPSRFDVIVTDNLFGDILTDEAGAVSGGIGLAASGNIDATGTNPSMFEPVHGSAPDIAGQGIADPTAAILSAAMLLRHLGDEDNAVRIETAIAADVA 317
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_SULDN (3-isopropylmalate dehydrogenase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=leuB PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.981e-30 Identity = 74/177 (41.81%), Postives = 113/177 (63.84%), Query Frame = -1 Query: 290 IITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 817 + TR+ +R+A AF A + + RV +I KAN++ + L+ + EVA++YPE+ + +DN M L+++P FDV++ N++GDI+SD + L G +GL PS ++G I + E +HGSAPDIAG+ +ANP A +LS+ MLR+ L H AD+I A+ + EG YRT DL Sbjct: 159 VYTREEIVRIAHQAFKIAMSRSK-RVCSIDKANVLDVSQ-LWREVVIEVAKEYPEVELTHMYVDNAAMQLIRDPRQFDVMLTGNIFGDILSDEASMLSGSIGLLPSASVG-AKIGVYEPIHGSAPDIAGQGIANPIATILSASMMLRYALGEHGAADKIDAAVKRALKEG-YRTKDL 331
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_RALME (3-isopropylmalate dehydrogenase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=leuB PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.981e-30 Identity = 71/169 (42.01%), Postives = 109/169 (64.50%), Query Frame = -1 Query: 290 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 793 R+A AF A G+ ++ ++ KAN+++ T + +V+++YP++ + +DN M LVK P +FDV+V N++GDI+SD A L G +G+ PS ++ L E HGSAPDIAGK +ANP A +LS+ MLR+ L ++ADRI+NA+ +A+G YRTAD+ Sbjct: 169 RIAHVAFQAAAKRGK-KLCSVDKANVLE-TFQFWKDIVIDVSKEYPDVELSHMYVDNAAMQLVKAPKSFDVIVTGNMFGDILSDEAAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGVANPLATILSAAMMLRYSLNRAEQADRIENAVKKVLAQG-YRTADI 334
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_PSEHT (3-isopropylmalate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=leuB PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.981e-30 Identity = 77/190 (40.53%), Postives = 114/190 (60.00%), Query Frame = -1 Query: 251 TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADR-IQNAILSTIAEGKYRTADL--GGSSTTSDFTKAI 811 +R+ R+A +AF AK V+++ KAN++ + L+ + EV++ YPE+ + + +DN M LVK P+ FDVL+ NL+GDI+SD CA + G +GL PS ++ + G L E GSAPDIAGK +ANP A +LS+ MLR+ D+A R I+ A+ +A G T D+ TT+D AI Sbjct: 168 SRKEIERIARFAFEAAKLRS-SHVTSVDKANVLASSV-LWREVVTEVSKDYPEVKLDYIYVDNAAMQLVKQPSQFDVLLCDNLFGDILSDECAMITGSMGLLPSASLNQSGFGLYEPAGGSAPDIAGKGVANPIAQILSAALMLRYSLGQDEAARTIEKAVAEAVAAG-VGTPDIFPNAGYTTNDVAAAI 354 The following BLAST results are available for this feature:
BLAST of CN188826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188826 ID=CN188826; Name=CN188826; organism=Citrus sinensis; type=EST; length=847bpback to top |