CN188826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_STAS1 (3-isopropylmalate dehydrogenase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=leuB PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 6.506e-30 Identity = 73/192 (38.02%), Postives = 114/192 (59.38%), Query Frame = -1 Query: 239 TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDK-ADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 811 TR R+A F A+ ++++++ K N++ + L+ EV++ YP++ +++D C M L+ NP+ FDV+V NL+GDI+SD + + G LGL+PS + E G L E +HGSAPDIA +++ANP +LLS LR DK AD+++N I I EGK T DL G+ TS+ + ++L Sbjct: 158 TRDEIERIARVGFELAQKR-HKKLTSVDKENVLSSSK-LWRNVINEVSQSYPDVEVNHLLVDACAMHLITNPSQFDVIVTENLFGDILSDEASVIPGSLGLSPSASFSEQGPRLYEPIHGSAPDIANQDIANPFGMLLSVAMCLRESLNEDKAADKLENVIYQLIKEGK-TTRDLNGNYLTSEIFNYVKENL 346
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_SALTI (3-isopropylmalate dehydrogenase OS=Salmonella typhi GN=leuB PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 6.506e-30 Identity = 75/179 (41.90%), Postives = 114/179 (63.69%), Query Frame = -1 Query: 266 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL--GGSSTTSD 793 R+A AF A+ R +V++I KAN++Q + L+ + +VA+ YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E L E GSAPDIAGKN+ANP A +LS +LR+ L+ + A I+ AI + EG RT+DL G ++ ++D Sbjct: 174 RIARIAFESARKR-RRKVTSIDKANVLQSSI-LWREIVNDVAKAYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQEFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADEAATAIEQAINRALEEG-VRTSDLARGAAAVSTD 349
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_CORA7 (3-isopropylmalate dehydrogenase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=leuB PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 6.506e-30 Identity = 72/180 (40.00%), Postives = 111/180 (61.67%), Query Frame = -1 Query: 287 TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI--ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIA---EGKYRTADLG 811 TR RV AF A R+ V+ +HK N++ GL+ + EVA+++PE+T + ID + +V +PA +DV+V NL+GDI++DL + GG+GL S NI G ++ E VHGSAPDIAGK +A+PTA +LS+ +LRHL + A RI+ A+ + ++ + + RT ++G Sbjct: 152 TRFGVERVVRDAFQRAMGR-RKHVTLVHKTNVLVNAGGLWQRTVNEVAQEFPEVTVDYNHIDAATIYMVTDPARYDVIVTDNLFGDILTDLAGAVTGGIGLAASGNIDASGANPSMFEPVHGSAPDIAGKGIADPTAAILSAAMLLRHLGDEENAVRIEEAVAADVSARGDAQARTTEIG 330
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_WOLSU (3-isopropylmalate dehydrogenase OS=Wolinella succinogenes GN=leuB PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.497e-30 Identity = 75/169 (44.38%), Postives = 108/169 (63.91%), Query Frame = -1 Query: 290 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 793 R+A AF A ++RV ++ KAN++ + L+ + +A++YPE+ + IDN M L++NP FDV++ NL+GDI+SD + L G +GL PS +IG G AL E +HGSAPDIAG+ +ANP A + S+ MLRH L + AD I AI+ T+ EG YRT D+ Sbjct: 167 RIAHVAFKAAMRR-QKRVCSVDKANVLDVSQ-LWRETVTRIAKEYPEVELSHMYIDNAAMQLIRNPKQFDVILTGNLFGDILSDEASMLSGSIGLLPSASIG-GKAALYEPIHGSAPDIAGQGIANPIATIASASMMLRHSLGEVEAADAIDKAIVKTLKEG-YRTKDI 331
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_NITOC (3-isopropylmalate dehydrogenase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=leuB PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.497e-30 Identity = 73/184 (39.67%), Postives = 114/184 (61.96%), Query Frame = -1 Query: 245 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 793 R+A+ AF A R RV ++ KAN+++ T+ L+ + EVA ++PE+ + +DN M LV+ P FDV+V N++GDI+SD A L G +G+ PS ++ + G + E +HGSAPDIAG+ +ANP A +LS MLR+ L+ +A R++ A+ + + +G RT D+ TT T A+ D Sbjct: 171 RIAQVAFTIAMKRDR-RVCSVDKANVLEATE-LWREVMSEVAAEFPEVELSHMYVDNAAMQLVRAPKQFDVVVTTNMFGDILSDCAAMLTGSIGMLPSASLDQSGRGMYEPIHGSAPDIAGQGIANPLATILSVAMMLRYSLDSPAQATRLEKAVGAVLDQG-LRTPDIYSPGTTQVSTGAMGD 351
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_BUCUS (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Uroleucon solidaginis GN=leuB PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.497e-30 Identity = 70/173 (40.46%), Postives = 110/173 (63.58%), Query Frame = -1 Query: 278 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSS 793 R+A AF AKT +V +I K+N++ + L+ + ++V++ YP++ + IDN M ++KNP FD+L+ NL+GDIISD CA + G +G+ PS ++ E L E GSAPDI GKN+ANP A +LS ++R+ + L AD+I +++S + +G YRTAD+ +S Sbjct: 174 RIAHLAFQLAKTRNY-KVCSIDKSNVLNSSI-LWREIVQKVSKNYPDVHLSHLYIDNATMQIIKNPNQFDILLCSNLFGDIISDECAMITGSIGMLPSASLNEKKFGLYEPAGGSAPDIEGKNIANPIAQILSVSMLVRYSMNLKTIADKIDQSVISVLKKG-YRTADISNNS 343
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_BORPA (3-isopropylmalate dehydrogenase OS=Bordetella parapertussis GN=leuB PE=3 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 8.497e-30 Identity = 72/184 (39.13%), Postives = 111/184 (60.33%), Query Frame = -1 Query: 245 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 793 R+A F A+ + ++ ++ KAN+++ T + EV+ YP++ + +DN M LV+NP FDV+V NL+GDI+SD A L G +G+ PS ++ G L E HGSAPDIAG+ +ANP A +LS+ +LR+ L L +ADR++ A+ +A+G RTAD+ + TT T + D Sbjct: 171 RIARIGFESARKRNK-KLCSVDKANVLE-TSQFWRDLVIEVSRDYPDVELSHMYVDNAAMQLVRNPRQFDVIVTGNLFGDILSDEAAMLTGSIGMLPSASLNAAGQGLYEPSHGSAPDIAGQGIANPLATILSAAMLLRYSLNLAPQADRVEAAVRKVLADG-LRTADIHEAGTTKVSTSQMGD 351
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU32_BORBR (3-isopropylmalate dehydrogenase 2 OS=Bordetella bronchiseptica GN=leuB2 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.497e-30 Identity = 72/184 (39.13%), Postives = 111/184 (60.33%), Query Frame = -1 Query: 245 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 793 R+A F A+ + ++ ++ KAN+++ T + EV+ YP++ + +DN M LV+NP FDV+V NL+GDI+SD A L G +G+ PS ++ G L E HGSAPDIAG+ +ANP A +LS+ +LR+ L L +ADR++ A+ +A+G RTAD+ + TT T + D Sbjct: 171 RIARIGFESARKRNK-KLCSVDKANVLE-TSQFWRDLVIEVSRDYPDVELSHMYVDNAAMQLVRNPRQFDVIVTGNLFGDILSDEAAMLTGSIGMLPSASLNAAGQGLYEPSHGSAPDIAGQGIANPLATILSAAMLLRYSLNLAPQADRVEAAVRKVLADG-LRTADIHEAGTTKVSTSQMGD 351
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_PHOPR (3-isopropylmalate dehydrogenase OS=Photobacterium profundum GN=leuB PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.110e-29 Identity = 72/170 (42.35%), Postives = 103/170 (60.59%), Query Frame = -1 Query: 284 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGG 793 R+A AF A + V +I KAN++Q + L+ + EVA+ YPE+T + IDN M L+K+P+ FDV++ N++GDIISD CA + G +G+ PS ++ + + E GSAPDIAGKN+ANP A +LS+ MLR+ +KA R +S E TADL G Sbjct: 174 RIARIAFESAMLR-EKNVYSIDKANVLQSSI-LWREVVEEVAKDYPEVTLNHMYIDNATMQLIKDPSQFDVMLCSNIFGDIISDECAMITGSMGMLPSASLNQEKFGMYEPAGGSAPDIAGKNIANPVAQILSAALMLRYSLDEEKAARAIEQAVSQALEAGELTADLAG 341
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_PELCD (3-isopropylmalate dehydrogenase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=leuB PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.110e-29 Identity = 72/169 (42.60%), Postives = 104/169 (61.54%), Query Frame = -1 Query: 290 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 793 R+ AF A+ G++ VS I KAN++ T L+ + V+ YP++ + +DN M LVK P FDVL+ PN++GDI+SD A L G LG+ PS ++ EG + E GSAPDIAGKN+ANP A +LS+ +LR+ L D AD ++ A+ + +A G RT D+ Sbjct: 174 RITRVAFDAARKRGKKLVS-IDKANVLS-TSVLWREVVERVSADYPDVVLSHMYVDNAAMQLVKAPKQFDVLLCPNMFGDILSDEAAMLTGSLGMLPSASLAEGSFGMYEPAGGSAPDIAGKNIANPVAQILSAAMLLRYSCGLADAADAVEKAVENCLAAG-LRTGDI 339 The following BLAST results are available for this feature:
BLAST of CN188826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188826 ID=CN188826; Name=CN188826; organism=Citrus sinensis; type=EST; length=847bpback to top |