CN188826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_BORA1 (3-isopropylmalate dehydrogenase OS=Bordetella avium (strain 197N) GN=leuB PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.110e-29 Identity = 73/184 (39.67%), Postives = 111/184 (60.33%), Query Frame = -1 Query: 245 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 793 R+A F A+ + ++ ++ KAN+++ T + EVA +YP++ + +DN M LV+NP FDV+V NL+GDI+SD A L G +G+ PS ++ G L E HGSAPDIAG+ +ANP A +LS+ +LR+ L +ADRI+ A+ +A+G RTAD+ + TT T + D Sbjct: 171 RIAHVGFETARKRNK-KLCSVDKANVLE-TSQFWRDIVIEVAREYPDVELSHMYVDNAAMQLVRNPRQFDVIVTGNLFGDILSDEAAMLTGSIGMLPSASLNASGQGLYEPSHGSAPDIAGQGIANPLATILSAAMLLRYSLNQPAQADRIEAAVRKVLAQG-LRTADIHEAGTTKVSTSQMGD 351
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_THIDA (3-isopropylmalate dehydrogenase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=leuB PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.449e-29 Identity = 72/174 (41.38%), Postives = 107/174 (61.49%), Query Frame = -1 Query: 275 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELH-DKADRIQNAILSTIAEGKYRTADLGGSST 793 RVA AF A G+ ++ ++ KAN+++ ++ L+ + EVA+ YPE+ + +DN M L++ P FD +V N++GDI+SD + L G +G+ PS ++ E + E +HGSAPDIAGKNLANP A +LS M R+ ADRI+NA+ IA+G YRT D+ T Sbjct: 167 RVAHVAFGIAMKRGK-KLCSVEKANVLECSE-LWKEIMIEVAKDYPEVELSHMYVDNAAMQLIRAPKQFDTIVTGNIFGDILSDAASMLSGSIGMLPSASLDEHNKGMYEPIHGSAPDIAGKNLANPLATILSVAMMYRYTFADLATADRIENAVKQVIAKG-YRTGDIWTEGT 337
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_STRCO (3-isopropylmalate dehydrogenase OS=Streptomyces coelicolor GN=leuB PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.449e-29 Identity = 74/190 (38.95%), Postives = 112/190 (58.95%), Query Frame = -1 Query: 272 VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGG--IALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTT 835 V + + T RV AF A+ R++++ +HK N++ L+ +VA +YPE+T + + +D + LV +PA FDV+V NL+GDII+DL A + GG+G+ S NI G ++ E VHGSAPDIAG+ A+PTA +LS +LRHL D+A RI++A+ + + E DL ST+ Sbjct: 150 VATEVSVNTAYGVERVVRDAFARAQARPRKKLTLVHKNNVLTFAGHLWTNIFNKVAAEYPEVTTDYLHVDAATIFLVTDPARFDVIVTDNLFGDIITDLAAAVSGGIGVAASGNINPSGDFPSMFEPVHGSAPDIAGQGKADPTATVLSVALLLRHLGYEDEAARIEDAVSADLGE----RGDLPARSTS 335
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_RALEJ (3-isopropylmalate dehydrogenase OS=Ralstonia eutropha (strain JMP134) GN=leuB PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.449e-29 Identity = 70/169 (41.42%), Postives = 108/169 (63.91%), Query Frame = -1 Query: 290 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 793 R+A AF A G+ ++ ++ KAN+++ T + +V+++YP++ + +DN M LVK P +FDV+V N++GDI+SD A L G +G+ PS ++ L E HGSAPDIAGK +ANP A +LS+ MLR+ L ++ADRI+NA+ +A+G YRT D+ Sbjct: 169 RIAHVAFQAAAKRGK-KLCSVDKANVLE-TFQFWKDIVIDVSKEYPDVELSHMYVDNAAMQLVKAPKSFDVIVTGNMFGDILSDEAAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGVANPLATILSAAMMLRYSLNKAEQADRIENAVKKVLAQG-YRTGDI 334
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_BLOPB (3-isopropylmalate dehydrogenase OS=Blochmannia pennsylvanicus (strain BPEN) GN=leuB PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.449e-29 Identity = 75/184 (40.76%), Postives = 110/184 (59.78%), Query Frame = -1 Query: 245 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 793 R+A AF A+ R+RVS+I KAN++ T L+ + +A+ YP++ E + IDN M L+ NP+ FD+++ PNL+GDI+SD CA + G +G+ PS +I E L E GSAPDIA KN+ANP A +LS + R+ L+L A +I+ A+ + G YRT D+ S T + D Sbjct: 174 RIANIAFKLAQKR-RKRVSSIDKANVLH-TSMLWREVVSHLAKNYPDVELEHLYIDNASMQLINNPSKFDIILCPNLFGDILSDECAMISGSIGMLPSASINEHNFGLYEPAGGSAPDIAEKNIANPIAHILSIALLFRYSLKLDHIAIKIEKAVSQALMLG-YRTIDIAKKHEKSISTNEMGD 354
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_THIFE (3-isopropylmalate dehydrogenase OS=Thiobacillus ferrooxidans GN=leuB PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.893e-29 Identity = 74/182 (40.66%), Postives = 113/182 (62.09%), Query Frame = -1 Query: 251 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 793 R+A AF A+ R+++ ++ KAN+++ T L+ + EVA YP++ + +DN M L++ PA FDVL+ N++GDI+SD + L G +G+ PS ++GEG A+ E +HGSAPDIAG++ ANP A +LS MLRH L A R++ A+ + +G RTAD+ T TKA+ Sbjct: 169 RIAHVAFRAAQGR-RKQLCSVDKANVLETTR-LWREVVTEVARDYPDVRLSHMYVDNAAMQLIRAPAQFDVLLTGNMFGDILSDEASQLTGSIGMLPSASLGEGR-AMYEPIHGSAPDIAGQDKANPLATILSVAMMLRHSLNAEPWAQRVEAAVQRVLDQG-LRTADIAAPGTPVIGTKAM 346
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_RHOE4 (3-isopropylmalate dehydrogenase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=leuB PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.893e-29 Identity = 72/194 (37.11%), Postives = 110/194 (56.70%), Query Frame = -1 Query: 269 VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI--ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAI---LSTIAEGKYRTADLGGSSTTS 835 + + I T + RV YAF A+T + ++ IHK N++ ++ + V +YP++ ID + +V +P+ FDV+V NL+GDII+DL + GG+GL S NI G ++ E VHGSAPDIAGK +A+PTA +LS+ +LRHL D A R++ + L+T EG T ++G T + Sbjct: 144 IATEVSINTWFGAERVVRYAFALAQTRSKH-LTLIHKTNVLSNAGAIWTRAIETVGAEYPDVETAYCHIDAATIYMVTDPSRFDVIVTDNLFGDIITDLAGAVTGGIGLAASGNIDASGTNPSMFEPVHGSAPDIAGKGIADPTAAILSAALLLRHLGREDDAARVEAVVAADLATRGEGPISTTEIGDRITAA 336
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_HAHCH (3-isopropylmalate dehydrogenase OS=Hahella chejuensis (strain KCTC 2396) GN=leuB PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.893e-29 Identity = 72/182 (39.56%), Postives = 112/182 (61.54%), Query Frame = -1 Query: 251 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 793 R+ AF A+ + R+ ++ KAN+++ T L+ + E+A++YP++ + +DN M LV+ P FDV+V N++GDI+SD A L G +G+ PS ++ G + E HGSAPDIAG+N+ANP A +LS+ MLR+ L D A I+ A+ + +G RT D+ GSS S T+A+ Sbjct: 171 RIGRVAFEAAQKRNK-RLCSVDKANVLEVTV-LWREVMDELAKEYPDVELSHMYVDNAAMQLVRAPKQFDVIVTGNMFGDILSDEAAMLTGSIGMLPSASLNAAGKGMYEPCHGSAPDIAGQNMANPLATILSAAMMLRYSLAAEDAAAAIEQAVSDVLDQG-LRTRDIAGSSGESVSTQAM 349
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_BACLD (3-isopropylmalate dehydrogenase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=leuB PE=3 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.893e-29 Identity = 72/182 (39.56%), Postives = 113/182 (62.09%), Query Frame = -1 Query: 260 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSS---TTSDFT 793 RV AF A++ + +V+++ KAN+++ + L+ K EVA+++P++ E +++DN M L+ P FD++V N++GDI+SD + L G LG+ PS ++ G+ L E VHGSAPDIAG+N+ANP A +LS+ MLR L +A +++A+ + GK RT DL S TT T Sbjct: 171 RVIREAFQMAQSR-KGKVTSVDKANVLESSK-LWRKTAEEVAKEFPDVKLEHMLVDNAAMQLIYAPGQFDIIVTENMFGDILSDEASMLTGSLGMLPSASLSSSGLHLYEPVHGSAPDIAGQNIANPLAAILSAAMMLRTSFGLEAEAQAVEHAVDQVLRAGK-RTKDLAKGSEHCTTQSIT 349
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_SYNJA (3-isopropylmalate dehydrogenase OS=Synechococcus sp. (strain JA-3-3Ab) GN=leuB PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.472e-29 Identity = 70/175 (40.00%), Postives = 110/175 (62.86%), Query Frame = -1 Query: 272 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTT 793 R+A AF A+ R ++ ++ KAN+++ + L+ + +A +YP++ + +DN M LV+ P FDV++ NL+GDI+SD A L G +G+ PS ++G G + E VHGSAPDIAG++ ANP A +LS +LR+ L+ ADRI+ A+ + +A+G YRTAD+ T Sbjct: 179 RIARVAFELARKR-RRKLCSVDKANVLEVSQ-LWRERVTAIAAEYPDVELSHLYVDNAAMQLVRWPKQFDVILTENLFGDILSDEAAMLTGSIGMLPSASLGSSGPGVYEPVHGSAPDIAGQDKANPIAQVLSGAMLLRYSLDQPQAADRIEQAVEAVLAQG-YRTADIYSEGMT 350 The following BLAST results are available for this feature:
BLAST of CN188826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188826 ID=CN188826; Name=CN188826; organism=Citrus sinensis; type=EST; length=847bpback to top |