CN188826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_STRMU (3-isopropylmalate dehydrogenase OS=Streptococcus mutans GN=leuB PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.472e-29 Identity = 75/186 (40.32%), Postives = 115/186 (61.83%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 793 R+ AF A+ + +V++I K N++ T L+ + EVA++Y ++T E ++D+ M+++ NPA FDV+V NL+GDI+SD + L G LG+ PS + E G +L E +HGSAPDIAGK +ANP +++LS MLR A+ I++A+ T+ +G T DLGG + T T AI +L Sbjct: 162 RIMRKAFAIARGRSK-KVTSIDKQNVLA-TSKLWRQIAEEVAKEYSDVTLEHQLVDSAAMVMITNPACFDVVVTENLFGDILSDESSVLPGTLGVMPSASHSESGPSLYEPIHGSAPDIAGKGIANPISMILSVAMMLRDSFGETAGAEMIEHAVNKTLTQG-ILTRDLGGLANTKQMTAAIIANL 344
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_PROMA (3-isopropylmalate dehydrogenase OS=Prochlorococcus marinus GN=leuB PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.472e-29 Identity = 74/169 (43.79%), Postives = 109/169 (64.50%), Query Frame = -1 Query: 290 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADL 793 R+A+ AF ++T R+++ +I KAN+++ + L+ + + E+YP I +DN M LV+ PA FDV++ NL+GDIISD A L G +G+ PS ++GE G + E VHGSAPDIA KNLANP A++LS+ MLR L + A ++NAI + +G +RT DL Sbjct: 172 RIAKIAFDLSETR-RKKICSIDKANVLEVSQ-LWRERVIKAQEQYPNIELTHQYVDNAAMQLVREPAQFDVILTSNLFGDIISDEAAMLTGSIGMLPSASLGEDGPGVFEPVHGSAPDIAHKNLANPIAMILSTAMMLRTGLMEYKAATDLENAIDKVLGKG-FRTIDL 337
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_PELLD (3-isopropylmalate dehydrogenase OS=Pelodictyon luteolum (strain DSM 273) GN=leuB PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.472e-29 Identity = 75/190 (39.47%), Postives = 112/190 (58.95%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGG----SSTTSDFTKAICDHL 793 R+A AF A+ G +RV +I KAN+++ + + V +P++ ++ +DN M +V+NP FDV+V NL+GDI+SD+ + G LG+ PS +IG AL E +HGSAPDIAGKN+ANP A + S M H + D ++ I AI ++EG RTAD+ S +T++ T+ I HL Sbjct: 165 RIARLAFEAAQKRGSKRVMSIDKANVLEVSQ-FWRNEVHRVHRDFPDVELSDMYVDNAAMQIVRNPKQFDVIVTGNLFGDILSDIAGMITGSLGMLPSASIGRVH-ALYEPIHGSAPDIAGKNIANPIATIASVAMMFEHSFCMADISNEIHAAIEGALSEG-LRTADIAAPGQKSVSTTEMTEGIIRHL 351
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_COREF (3-isopropylmalate dehydrogenase OS=Corynebacterium efficiens GN=leuB PE=3 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 2.472e-29 Identity = 74/181 (40.88%), Postives = 107/181 (59.12%), Query Frame = -1 Query: 287 TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI--ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIA----EGKYRTADLG 811 TR + RV YAF A++ R ++ +HK N++ GL+ + EVA +YPE+T + ID + LV +P+ FDV+V NL+GDI++D + GG+GL S NI G ++ E VHGSAPDI GK +A+PTA +LS+ MLRHL A RI+ A+ +A E T ++G Sbjct: 152 TRYGAERVIRYAFELAQSR-RRHLTLVHKTNVLVHGGGLWQRTVDEVAREYPEVTVDYNHIDAATIYLVTDPSRFDVIVTDNLFGDILTDEAGAISGGIGLAASGNIDATGTNPSMFEPVHGSAPDIMGKGIADPTAAILSAAMMLRHLGDEANAVRIEEAVARDVAGRDPEAPISTTEVG 331
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_CORDI (3-isopropylmalate dehydrogenase OS=Corynebacterium diphtheriae GN=leuB PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.472e-29 Identity = 69/180 (38.33%), Postives = 110/180 (61.11%), Query Frame = -1 Query: 287 TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI--ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAE---GKYRTADLG 811 TR RV AF A+ ++ ++ +HK N++ GL+ + E+A +YPE+T + ID + +V +P+ +DV+V NL+GDI++DL + GG+GL S NI G+ ++ E VHGSAPDIAG+ +A+PTA +LS+ +LRH+ A RI+ A+ +AE G +T ++G Sbjct: 152 TRYGVERVVRDAFERAQNR-KKHLTLVHKTNVLVNAGGLWQRTVNEIATEYPEVTVDYNHIDAATIYMVTDPSRYDVIVTDNLFGDILTDLAGAVTGGIGLAASGNIDATGVNPSMFEPVHGSAPDIAGQGIADPTAAILSAAMLLRHVGDESNAQRIEAAVTYDVAERPAGPVKTVEVG 330
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_CHRVO (3-isopropylmalate dehydrogenase OS=Chromobacterium violaceum GN=leuB PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.472e-29 Identity = 69/169 (40.83%), Postives = 108/169 (63.91%), Query Frame = -1 Query: 290 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 793 R+A AF A R ++ ++ KAN+++ T+ + + EVA++YP++ + +DN M LV+NP FDV+V N++GDI+SD + L G +G+ PS ++ + L E HGSAPDIAG+NLANP A +LS+ MLR+ A R+++A+ +A+G YRTAD+ Sbjct: 168 RIAHVAFGIAMKRNR-KLCSVDKANVLETTE-FWKEIMIEVAKEYPQVELSHMYVDNAAMQLVRNPKQFDVMVTGNIFGDILSDEASMLTGSIGMLPSASLDQNNKGLYEPSHGSAPDIAGQNLANPLATILSAAMMLRYSFGQEAAARRVEDAVKKVLAQG-YRTADI 333
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_BUCRP (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Rhopalosiphum padi GN=leuB PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.472e-29 Identity = 69/169 (40.83%), Postives = 106/169 (62.72%), Query Frame = -1 Query: 290 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 793 R+A AF A + R +V +I K+N++ + L+ + EV++ YP I + IDN CM ++KNP+ FDVL+ N++GDIISD CA + G +G+ PS ++ L E GSAPDI GKN+ANP A +LS ++RH + L++ AD+I +++ + G YRT D+ Sbjct: 174 RIAHLAFELASSR-RCKVCSIDKSNVLASSI-LWREIVEEVSKNYPNIILSHLYIDNACMQIIKNPSQFDVLLCSNIFGDIISDECAMITGSIGMLPSASLNSKKFGLYEPAGGSAPDIEGKNIANPIAQILSLSMLIRHSMNLNEIADKIDSSVYRALKAG-YRTLDI 339
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_RALSO (3-isopropylmalate dehydrogenase OS=Ralstonia solanacearum GN=leuB PE=3 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 3.229e-29 Identity = 71/169 (42.01%), Postives = 106/169 (62.72%), Query Frame = -1 Query: 290 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 793 R+A AF A G+ ++ ++ KAN+++ T + +V ++YPE+ + +DN M LVK P FDV+V N++GDI+SD A L G +G+ PS ++ L E HGSAPDIAGK +ANP A +LS+ MLR+ L ++ADRI+NA+ +A+G YRT D+ Sbjct: 170 RIAHVAFQAAAKRGK-KLCSVDKANVLE-TFQFWKDIVTDVHKEYPEVELSHMYVDNAAMQLVKAPKNFDVVVTGNMFGDILSDEAAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGIANPLATILSAAMMLRYTLGKAEQADRIENAVKKVLAQG-YRTGDI 335
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_BUCAI (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=leuB PE=3 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 3.229e-29 Identity = 68/170 (40.00%), Postives = 110/170 (64.71%), Query Frame = -1 Query: 290 LRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 796 +R+A AF A++ +++V +I K+N++Q + L+ + V++KYP++ + IDN M ++K+P FDVL+ NL+GDIISD CA + G +G+ PS + E L E GSAPDI GKN+ANP A +LS ++R+ + L+ AD+I A+ + + +G YRT+D+ Sbjct: 173 IRIAHLAFKLARSR-KKKVCSIDKSNVLQSSI-LWREVVESVSKKYPDVHLSHLYIDNAAMQIIKDPNQFDVLLCSNLFGDIISDECATITGSIGMLPSASFNEKNFGLYEPAGGSAPDIEGKNIANPIAQILSLSMLVRYGMNLNQIADKIDKAVNNVLKKG-YRTSDI 339
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_OCEIH (3-isopropylmalate dehydrogenase OS=Oceanobacillus iheyensis GN=leuB PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.217e-29 Identity = 74/205 (36.10%), Postives = 124/205 (60.49%), Query Frame = -1 Query: 239 GVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL----GGSSTTSDFTKAICDHL 838 GVV++L+ +R+ R+ E F A+ ++ ++++ KAN+++ + L+ + E ++ YP++ +++D M LV P+ FDV+V NL+GDI+SD + L G LG+ PS ++ G+ L E VHGSAPDIAGK +ANP A++LS+ ML H L D+A I+ A+ + +G + TAD+ G T T A+ +++ Sbjct: 152 GVVDTLQY-SREEIERIVERGFEAARIR-KKHLTSVDKANVLESSK-LWREIVEEKSKDYPDVAVNHLLVDAAAMKLVTQPSFFDVIVTENLFGDILSDEASVLTGSLGMLPSASLRADGLGLYEPVHGSAPDIAGKGIANPLAMILSAALMLEHSFGLVDEAKEIERAVNDCLLQG-FHTADIHIPGGVQVGTKQMTDAVLENV 352 The following BLAST results are available for this feature:
BLAST of CN188826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188826 ID=CN188826; Name=CN188826; organism=Citrus sinensis; type=EST; length=847bpback to top |