CN188826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_RHOOB (3-isopropylmalate dehydrogenase OS=Rhodococcus opacus (strain B4) GN=leuB PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.602e-28 Identity = 71/188 (37.77%), Postives = 111/188 (59.04%), Query Frame = -1 Query: 287 VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI--ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAI---LSTIAEGKYRTADLG 835 + + I T + RV YAF A+T R+ V+ IHK N++ ++ + V+ +YP++ ID + +V +P+ FDV+V NL+GDII+DL + GG+GL S NI G ++ E VHGSAPDIAG+ +A+PTA +LS+ +LRHL A RI+ A+ L++ + K T+++G Sbjct: 143 IATEVSINTWFGAERVVRYAFALAQTR-RKHVTLIHKTNVLSNAGAIWTRAVETVSAEYPDVETAYCHIDAATIYMVTDPSRFDVIVTDNLFGDIITDLAGAVTGGIGLAASGNIDASGTNPSMFEPVHGSAPDIAGQGIADPTAAILSAALLLRHLGRDGDAARIETAVEADLASRGDSKVVTSEVG 329
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_STAHJ (3-isopropylmalate dehydrogenase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=leuB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.093e-28 Identity = 69/183 (37.70%), Postives = 107/183 (58.47%), Query Frame = -1 Query: 266 TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSD 811 T++ R+A AF A +++++++ K N++ T L+ K E++ ++P++ +++D C M L+ P FDV+V NL+GDI+SD + + G LGL+PS + G L E +HGSAPDIA +NLANP ++LS LR D A ++ A+ I +GK T DL G TTSD Sbjct: 158 TKKEIERIAMVAFELASQR-KKKLTSVDKENVLA-TSKLWRKTINEISHEFPDVKVNHLLVDACSMQLISQPTNFDVIVTENLFGDILSDEASTIPGSLGLSPSASFSLEGPRLYEPIHGSAPDIANQNLANPFGMILSLAMCLRESFNFEDAASELEQAVYQLIKDGK-TTKDLNGHYTTSD 337
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_MOOTA (3-isopropylmalate dehydrogenase OS=Moorella thermoacetica (strain ATCC 39073) GN=leuB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.093e-28 Identity = 72/175 (41.14%), Postives = 108/175 (61.71%), Query Frame = -1 Query: 290 TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 811 TR R+ AF A+ R ++++ KAN++ T L+ ++ ++PE+T E + +DNC M LV+ PA FDV+V N +GDI+SD + L G +G+ PS +IG G +AL E HGSAPDIAG+ ANP A +LS+ ML++ ++ A I+ A+ +A+G YRT DL Sbjct: 163 TRAEIERIVRLAFTIARQR-RCHLTSVDKANVLT-TSRLWRDTVEDIKGEFPEVTVEHMYVDNCAMQLVRRPAQFDVIVTENTFGDILSDQASVLTGSIGMLPSASIG-GAVALYEPCHGSAPDIAGQQKANPLATILSAAMMLKYSFKMDQAAAAIEAAVGRVLAKG-YRTPDL 333
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_GLOVI (3-isopropylmalate dehydrogenase OS=Gloeobacter violaceus GN=leuB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.093e-28 Identity = 65/168 (38.69%), Postives = 101/168 (60.12%), Query Frame = -1 Query: 290 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADL 793 R+ AF A+ R ++ ++ KAN+++ + L+ + +A +YP++ + +DNC M LV+ P FD +V N++GDI+SD A L G +G+ PS ++G GG L E VHGSAPDIAG++ ANP A +LS +LRH +A + + T+ E YRT D+ Sbjct: 173 RIGRVAFEAARER-RGKLCSVDKANVLEVSQ-LWREVLVGLAPEYPDVELTHMYVDNCAMQLVRRPRQFDTIVTENMFGDILSDEAAMLTGSIGMLPSASLGSGGPGLYEPVHGSAPDIAGQDKANPLAQVLSGAMLLRHSLRQPEAAQAVERAVQTVLEQGYRTGDI 338
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_BUCUA (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Uroleucon aeneum GN=leuB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.093e-28 Identity = 70/180 (38.89%), Postives = 113/180 (62.78%), Query Frame = -1 Query: 257 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTK 793 R+A AF ++T +V +I K+N++ + L+ + ++V++ YP++ + IDN M ++K+P FDVL+ NL+GDIISD CA + G +G+ PS ++ E L E GSAPDI GKN+ANP A +LS ++R+ + L AD+I +++S + +G YRTAD+ S +D+ K Sbjct: 174 RIAHLAFQLSQTRNY-KVCSIDKSNVLNSSI-LWREIVKKVSKHYPDVHLSHLYIDNATMQIIKDPNQFDVLLCSNLFGDIISDECAMITGSIGMLPSASLNEKKFGLYEPAGGSAPDIEGKNIANPIAQILSLSMLVRYSMNLKKIADKIDQSVISVLKKG-YRTADI---SNNNDYLK 347
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_BACSU (3-isopropylmalate dehydrogenase OS=Bacillus subtilis GN=leuB PE=3 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 2.093e-28 Identity = 71/186 (38.17%), Postives = 115/186 (61.83%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 793 RV F A + +V+++ KAN+++ + L+ + +VA+++P++ E +++DN M L+ P FDV+V N++GDI+SD + L G LG+ PS ++ G+ L E VHGSAPDIAGK +ANP A +LS+ +LR L ++A +++A+ +A GK RT DL S S T+AI + + Sbjct: 171 RVIREGFKMAAAR-KGKVTSVDKANVLESSR-LWREVAEDVAQEFPDVKLEHMLVDNAAMQLIYAPNQFDVVVTENMFGDILSDEASMLTGSLGMLPSASLSSSGLHLFEPVHGSAPDIAGKGMANPFAAILSAAMLLRTSFGLEEEAKAVEDAVNKVLASGK-RTRDLARSEEFSS-TQAITEEV 352
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_STAEQ (3-isopropylmalate dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=leuB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.733e-28 Identity = 71/195 (36.41%), Postives = 117/195 (60.00%), Query Frame = -1 Query: 251 VESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 832 ++SLK +++ R+ AF+ A R++++++ K N++ + L+ + +V + YPE+ +++D C M L+ P FDV+V NL+GDI+SD + + G LGL+PS + G+ G L E +HGSAPDIA ++ ANP ++LS LR L +D A+ +++ + S I K TADLGG TS+ K + Sbjct: 152 LDSLKYSSQEIE-RIVRIAFNLANRR-RKKLTSVDKENVLSSSK-LWRQIVNDVKKDYPEVEVNHMLVDACSMHLITQPTQFDVIVTENLFGDILSDEASVIPGSLGLSPSASFGQTGTRLYEPIHGSAPDIANEDKANPFGMVLSLALCLRESLNQNDAANELESIVYSFIQSNK-TTADLGGQYRTSEIFKLL 342
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_RHOSR (3-isopropylmalate dehydrogenase OS=Rhodococcus sp. (strain RHA1) GN=leuB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.733e-28 Identity = 71/188 (37.77%), Postives = 111/188 (59.04%), Query Frame = -1 Query: 287 VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI--ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAI---LSTIAEGKYRTADLG 835 + + I T + RV YAF A+T R+ V+ IHK N++ ++ + V+ +YP++ ID + +V +P+ FDV+V NL+GDII+DL + GG+GL S NI G ++ E VHGSAPDIAG+ +A+PTA +LS+ +LRHL A RI+ A+ L++ + K T+++G Sbjct: 143 IATEVSINTWFGAERVVRYAFALAQTR-RKHVTLIHKTNVLSNAGAIWTRAVETVSAEYPDVETAYCHIDAATIYMVTDPSRFDVIVTDNLFGDIITDLAGAVTGGIGLAASGNIDASGTNPSMFEPVHGSAPDIAGQGIADPTAAILSAALLLRHLGRDGDAARIEAAVEADLASRGDSKVVTSEVG 329
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_RHORT (3-isopropylmalate dehydrogenase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=leuB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.733e-28 Identity = 74/175 (42.29%), Postives = 108/175 (61.71%), Query Frame = -1 Query: 290 LRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI-----ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 796 +RVA+ AF A G+ R+ ++ KAN+M+ + L+ + ++ YPEI + DNC M LV+ P FDV+V NL+GDI+SD A L G LG+ PS ++G A+ E VHGSAPDIAG++ ANP A +LS MLR+ +L ++AD + NA+ +A+G RT D+ Sbjct: 173 VRVAKVAFDLAGKRGK-RLCSVEKANVME-SGLLWREEVTKLGADYPEIALSHMYADNCAMQLVRQPKQFDVIVTDNLFGDILSDCAAMLTGSLGMLPSASLGAADAAGNRRAMYEPVHGSAPDIAGQDKANPLATILSFSMMLRYSFDLAEEADLVDNAVRGVLAKG-LRTGDI 344
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_DEIGD (3-isopropylmalate dehydrogenase OS=Deinococcus geothermalis (strain DSM 11300) GN=leuB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.733e-28 Identity = 72/185 (38.92%), Postives = 117/185 (63.24%), Query Frame = -1 Query: 245 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEK-YPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 793 RVA AF +A R RV+++ KAN+++ ++ L+ + + + ++ Y + +D+ M++V NP+ +DV++ NL+GDI+SDL A + G LGL PS ++G+G L E +HGSAPDIAG+ +ANP A ++S +LRH LE A++++ A+ + E + T DLGG + T FT A+ D Sbjct: 164 RVARVAF-WAAEQRRGRVTSVDKANVLEVSE-LWRRDVQALRDREYRNVHLNHEYVDSVAMLIVANPSRYDVILTENLFGDILSDLAAVIPGSLGLMPSASLGDGP-GLFEPIHGSAPDIAGQGIANPAAAIMSVAMLLRHGLERPQVANQVERAVALALRE--HPTRDLGGQADTRTFTHAVLD 343 The following BLAST results are available for this feature:
BLAST of CN188826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188826 ID=CN188826; Name=CN188826; organism=Citrus sinensis; type=EST; length=847bpback to top |