CN188826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH3G_MACFA (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial (Fragment) OS=Macaca fascicularis GN=IDH3G PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.474e-55 Identity = 105/202 (51.98%), Postives = 140/202 (69.31%), Query Frame = -1 Query: 239 VRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 844 V GVVESLKIIT+ SLR+AEYAF A+ GR++V+A+HKANIM+ DGLFL+CCREVA +YP+IT+E +++DN M LV P FDV+VMPNLYG+I++++CAGL+GG GL N G A + IA KN+ANPTA LL+S ML HL+LH A I+ A+L+++ T D+GG TTS+ + I H+ Sbjct: 144 VAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAVLASMDNENMHTPDIGGQGTTSEAIQDIIRHI 345
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH3G_HUMAN (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Homo sapiens GN=IDH3G PE=1 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 5.844e-55 Identity = 104/202 (51.49%), Postives = 140/202 (69.31%), Query Frame = -1 Query: 239 VRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 844 V GVVESLKIIT+ SLR+AEYAF A+ GR++V+A+HKANIM+ DGLFL+CCREVA +YP+IT+E +++DN M LV P FDV+VMPNLYG+I++++CAGL+GG GL N G A + IA KN+ANPTA LL+S ML HL+LH A I+ A+L+++ T D+GG TTS+ + + H+ Sbjct: 182 VAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAVLASMDNENMHTPDIGGQGTTSEAIQDVIRHI 383
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH2_YEAST (Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial OS=Saccharomyces cerevisiae GN=IDH2 PE=1 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 7.632e-55 Identity = 117/207 (56.52%), Postives = 152/207 (73.43%), Query Frame = -1 Query: 239 VVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFD--VLVMPNLYGDIISDLCAGL-IGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEG-KYRTADLGGSSTTSDFTKAICDHL 847 V GVV+S+K+ITR AS RV YAF YA+ GR RV +HK+ I + DGLF+ +E++++YP++T E +IDN + +V NP+A+ V V PNLYGDI+SDL +GL G LGLTPS NIG I++ EAVHGSAPDIAG++ ANPTALLLSSV ML H+ L + AD+IQNA+LSTIA G + RT DL G++TTS FT+A+ L Sbjct: 164 VCPGVVQSIKLITRDASERVIRYAFEYARAIGRPRVIVVHKSTIQRLADGLFVNVAKELSKEYPDLTLETELIDNSVLKVVTNPSAYTDAVSVCPNLYGDILSDLNSGLSAGSLGLTPSANIGH-KISIFEAVHGSAPDIAGQDKANPTALLLSSVMMLNHMGLTNHADQIQNAVLSTIASGPENRTGDLAGTATTSSFTEAVIKRL 369
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH1_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial OS=Arabidopsis thaliana GN=IDH1 PE=1 SV=2) HSP 1 Score: 213.772 bits (543), Expect = 9.968e-55 Identity = 107/202 (52.97%), Postives = 140/202 (69.31%), Query Frame = -1 Query: 251 VVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIAL---AEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 847 VV GVVESLK+IT+ S R+A+YAF YA + R++V+A+HKANIM+ DGLFL+ CREVA+KYP ITY E+++DNCCM LV P FDV+V PNLYG+++++ AG+ GG G+ P N+G A A + I +N ANP ALLLSS MLRHL+ ADR++ A+ IAEGK RT DLGG+STT + A+ Sbjct: 161 VVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPSITYNEIIVDNCCMQLVAKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGKDKIVLENKANPVALLLSSAMMLRHLQFPSFADRLETAVKKVIAEGKCRTKDLGGTSTTQEVVDAV 362
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH3G_RAT (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Rattus norvegicus GN=Idh3g PE=2 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 1.700e-54 Identity = 104/202 (51.49%), Postives = 139/202 (68.81%), Query Frame = -1 Query: 239 VRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 844 V GVVESLKIIT+ SLR+AEYAF A+ GR++V+A+HKANIM+ DGLFL+CCREVA +YP+IT++ +++DN M LV P FDV+VMPNLYG+I++++CAGL+GG GL N G A + IA KN+ANPTA LL+S ML HL+LH A I+ A+L+++ T D+GG TTS + I H+ Sbjct: 182 VAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFDSMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAVLASMDNENMHTPDIGGQGTTSQAIQDIIRHI 383
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH3G_MOUSE (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Mus musculus GN=Idh3g PE=1 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.788e-54 Identity = 104/202 (51.49%), Postives = 138/202 (68.32%), Query Frame = -1 Query: 239 VRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 844 V GVVESLKIIT+ SLR+AEYAF A+ GR++V+A+HKANIM+ DGLFL+CCREVA YP+IT++ +++DN M LV P FDV+VMPNLYG+I++++CAGL+GG GL N G A + IA KN+ANPTA LL+S ML HL+LH A I+ A+L+++ T D+GG TTS + I H+ Sbjct: 182 VAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVAAHYPQITFDSMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAVLASMDNENMHTPDIGGQGTTSQAIQDIIRHI 383
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_ARCFU (3-isopropylmalate dehydrogenase OS=Archaeoglobus fulgidus GN=leuB PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 6.461e-54 Identity = 105/199 (52.76%), Postives = 143/199 (71.86%), Query Frame = -1 Query: 239 VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 835 V E++++ITR+AS R+A YAF AK GR++V+A+HKAN+M+KT GLF CREVA+ YPEI Y + ID CM LV +P FDV+V N++GDI+SDL AGL+GGLGL PS N+GE A+ E VHG+A DIAGK +ANPTA++L++ MLRH ++A +++ A+ TI EGK +T DLGG+ T +F + L Sbjct: 129 VTEAIRVITREASERIARYAFELAKREGRKKVTALHKANVMKKTCGLFRDVCREVAKDYPEIQYNDYYIDAACMYLVMDPFRFDVIVTTNMFGDIVSDLAAGLVGGLGLAPSANVGE-RTAIFEPVHGAAFDIAGKGIANPTAMILTACMMLRHFGYVEEAKKVEEAVEKTIKEGK-KTPDLGGNLKTMEFANEVASLL 325
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH2_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial OS=Arabidopsis thaliana GN=IDH2 PE=1 SV=2) HSP 1 Score: 205.682 bits (522), Expect = 2.714e-52 Identity = 105/209 (50.24%), Postives = 141/209 (67.46%), Query Frame = -1 Query: 239 VVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNL------ANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 847 VV GVVESLK+IT+ S R+A+YAF YA + R++V+A+HKANIM+ DGLFL+ C+EVA+KYP I Y E+++DNCCM LV P FDV+V PNLYG+++++ AG+ GG G+ P N+ G A G++ GK+ ANP ALLLSS MLRHL+ ADR++ A+ IAEG RT DLGG+STT + A+ +L Sbjct: 161 VVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCQEVAKKYPSIAYNEIIVDNCCMQLVARPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNV---GAEYAVFEQGASAGNVGKDTTEEQKNANPVALLLSSAMMLRHLQFPSFADRLETAVKRVIAEGNCRTEDLGGNSTTQEVVDAVIANL 366
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH2_KLULA (Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial OS=Kluyveromyces lactis GN=IDH2 PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.630e-52 Identity = 109/207 (52.66%), Postives = 150/207 (72.46%), Query Frame = -1 Query: 239 VVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFD--VLVMPNLYGDIISDLCAGL-IGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIA-EGKYRTADLGGSSTTSDFTKAICDHL 847 V GVV+S+K+IT+ AS RV YAF YA+ R +V +HK+ I + DGLF+ ++++ +YP+I + ++DN + V++P A+D V+V PNLYGDI+SDL +GL G LGLTPS NIG +++ EAVHGSAPDIAG+N ANPTALLLSSV ML H+ L + AD+I+ A+L+TIA + K RT DLGGS++TS FT A+ + L Sbjct: 163 VAPGVVQSIKLITQDASERVIRYAFEYARAVDRSKVLVVHKSTIQRLADGLFVDVAKKLSSEYPDIELQTELLDNTVLKTVQHPEAYDDVVVVCPNLYGDILSDLNSGLSAGSLGLTPSANIGH-TVSIFEAVHGSAPDIAGQNKANPTALLLSSVMMLNHMGLTEHADKIEKAVLTTIASDAKNRTGDLGGSASTSSFTDAVIERL 368
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH3_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial OS=Arabidopsis thaliana GN=IDH3 PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.298e-51 Identity = 105/202 (51.98%), Postives = 136/202 (67.33%), Query Frame = -1 Query: 251 VVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG-EGGIALAEAVHGSAPD--IAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 847 VV GVVESLK+IT+ S R+A YAF YA + R++V+A+HKANIM+ DGLFL+ CREVA+ Y ITY E+++DNCCM LV P FDV+V PNLYG++I++ AG+ GG G+ P N+G E I A G+ + + + ANP ALLLSS MLRHL ADR++ A+ I EGKYRT DLGG TT + A+ Sbjct: 162 VVPGVVESLKVITKFCSERIARYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKHYSGITYNEIIVDNCCMQLVAKPEQFDVMVTPNLYGNLIANTAAGIAGGTGVMPGGNVGAEHAIFEQGASAGNVGNDKMVEQKKANPVALLLSSAMMLRHLRFPTFADRLETAVKQVIKEGKYRTKDLGGDCTTQEVVDAV 363 The following BLAST results are available for this feature:
BLAST of CN188826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188826 ID=CN188826; Name=CN188826; organism=Citrus sinensis; type=EST; length=847bpback to top |