CN188826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_CORJK (3-isopropylmalate dehydrogenase OS=Corynebacterium jeikeium (strain K411) GN=leuB PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.829e-25 Identity = 65/174 (37.36%), Postives = 102/174 (58.62%), Query Frame = -1 Query: 287 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNI--GEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAE---GKYRTADLG 793 RV AF A++ R++++ +HK N++ L+ + V ++YPE+ + ID + +V P +DV+V NL+GDI++DL + GG+GL S NI ++ E VHGSAPDIAG+ +A+P A +LS MLRHL A+RI+ A+L+ G +TA++G Sbjct: 158 RVVRDAFERAQSR-RKKLTWVHKTNVLVNAGSLWQRAIETVGQEYPEVQVDYNHIDAATIYMVTKPQEYDVIVTDNLFGDILTDLAGAVTGGIGLAASGNIDPSRKNPSMFEPVHGSAPDIAGQGIADPCAAILSVALMLRHLGDDANAERIEAAVLAEAGSRDGGPVKTAEVG 330
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_SYMTH (3-isopropylmalate dehydrogenase OS=Symbiobacterium thermophilum GN=leuB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 73/212 (34.43%), Postives = 117/212 (55.19%), Query Frame = -1 Query: 239 RGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEG----GI--ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSST----TSDFTKAICDHL 841 RGV + ++ T R+A F A+ R R++++ K N+M+ L+ EVA ++P++ E ++ DN M +++ P FDV++ NL+GD +SD A L G +GL PS ++G G+ E +HGSAPDIAG++ ANP A +L +LRH L D A ++ A+ + + EG RTAD+ T T+ +A+ D + Sbjct: 161 RGV--NTEVYTDAEIARIARMGFEIARGR-RRRLTSVDKGNVME-AGKLWRTVVDEVAREFPDVEVEHLLADNAAMQILRRPGDFDVMLASNLFGDFLSDEAAMLTGSIGLLPSASLGAARNRFGLPKGFYEPIHGSAPDIAGQDRANPLAAILCGAMLLRHSLGREDAARAVEQAVAAVLEEG-LRTADITVPGTAVLGTAAMARAVADRV 367
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_NEILA (3-isopropylmalate dehydrogenase (Fragment) OS=Neisseria lactamica GN=leuB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 60/147 (40.82%), Postives = 94/147 (63.95%), Query Frame = -1 Query: 353 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKA 793 R+A AF A+ + +V ++ KAN+++ T+ L+ + E+ ++YP++ + +DN M LV+ P FDV+ N++GDI+SD + L G LG+ PS ++ E G L E HGSAPDIAG+N ANP A +LS +LR+ L+D+A Sbjct: 170 RIAHVAFQSAQKRSK-KVCSVGKANVLETTE-LWREIFEEIGKEYPDVELSHMYVDNAAMQLVRAPKQFDVIATGNIFGDILSDEASMLTGSLGMLPSASLDENGKGLYEPSHGSAPDIAGQNKANPLATILSLAMLLRY-SLNDEA 313
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_SILPO (3-isopropylmalate dehydrogenase OS=Silicibacter pomeroyi GN=leuB PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.825e-25 Identity = 73/177 (41.24%), Postives = 105/177 (59.32%), Query Frame = -1 Query: 281 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI-----ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGS 793 RVA AF A + ++ ++ KAN+M+ + L+ + VA+ YPE+ + DN M LV+ P FDV++ NL+GDI+SD A L G LG+ PS ++G AL E VHGSAPDIAG+ ANP A +LS LR+ + +ADR++ A+ +A+G RTADL G+ Sbjct: 171 RVARSAFELAMRRSK-KLCSMEKANVME-SGILWREVVTRVAKDYPEVELSHMYADNGAMQLVRAPKQFDVILTDNLFGDILSDCAAMLTGSLGMLPSASLGAPMANGRPKALYEPVHGSAPDIAGQGKANPIACILSFAMALRYSFDQGAEADRLEAAVEQVLADG-VRTADLLGT 344
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_XYLFT (3-isopropylmalate dehydrogenase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=leuB PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.302e-25 Identity = 64/184 (34.78%), Postives = 105/184 (57.07%), Query Frame = -1 Query: 245 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 793 R+ + F A+ G+ ++ ++ KAN++ + L+ E+A+ YP++T + +DN M LV+ P FDV+V N++GDI+SD + L G +G+ PS ++ + E HGSAPDIAG+ +ANP A +LS +LR+ + AD I+ A+ + + RTAD+ T T A+ D Sbjct: 171 RILKVGFEMARLRGK-KLCSVDKANVLASSQ-LWRTVAGEMAKDYPDVTLSHMYVDNAAMQLVRYPKQFDVIVTENMFGDILSDQASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGVANPLATILSVAMLLRYGMGYIKTADAIEYAV-GVVLDSGLRTADIWSEGMTKVGTVAMGD 351
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_RHOPB (3-isopropylmalate dehydrogenase OS=Rhodopseudomonas palustris (strain BisB18) GN=leuB PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 6.302e-25 Identity = 75/182 (41.21%), Postives = 110/182 (60.44%), Query Frame = -1 Query: 272 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREV-AEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI------ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTT 793 R+A AF A+ R +V+++ K N+M K+ L+ + V AE Y ++ E + D+ M LVK P FDV+V NL+GDI+SD+ A L G LG+ PS ++G ++ E VHGSAPDIAGK LANP A+L S LR+ L++ + AD++ AI + +A+G RTAD+ +T Sbjct: 172 RIARVAFDLARKR-RNKVTSMEKRNVM-KSGVLWNEVVTRVHAEDYKDVQLEHQLADSGGMNLVKWPKQFDVIVTDNLFGDILSDIAAMLTGSLGMLPSASLGAVDANTGKRKSMYEPVHGSAPDIAGKGLANPVAMLASFGMALRYSLDMGELADKLDAAIAAVLAKG-LRTADIKSEGST 350
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_NEUCR (3-isopropylmalate dehydrogenase OS=Neurospora crassa GN=leu-1 PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 6.302e-25 Identity = 72/180 (40.00%), Postives = 109/180 (60.56%), Query Frame = -1 Query: 239 RVSAIHKANIMQKTDGLFLKCCREVAEK-YPEITYEEVVIDNCCMMLVKNPAAFD-VLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI--------ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 745 +V ++ KAN++ T L+ K +V K +P++ E +ID+ M+LVKNP A + V++ NL+GDIISD + + G +GL PS ++G GI + E +HGSAPDI+GK + NP +LS MLR+ L L +AD ++ A+ + I G +T DLGG++TTSD A+ L Sbjct: 187 KVWSLDKANVLA-TSRLWRKTVTDVISKEFPQLQLEHQLIDSAAMLLVKNPRALNGVVITSNLFGDIISDEASVIPGSIGLLPSASLG--GIPDGKGKCNGIYEPIHGSAPDISGKGIVNPVGTILSVAMMLRYSLNLPKEADAVEAAVKAAIDNGT-KTKDLGGNATTSDMGNAVVAEL 362
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU31_BORBR (3-isopropylmalate dehydrogenase 1 OS=Bordetella bronchiseptica GN=leuB1 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.302e-25 Identity = 73/193 (37.82%), Postives = 111/193 (57.51%), Query Frame = -1 Query: 245 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLF----LKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG--EGG--IALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTAD-LGGSSTTSDFTKAICD 793 R+A AF A+ G RV ++ K+N+++ GL ++ CR+ +YP++ E +++DNC + L PA FDVL+ NL+GDI+SD + G LG+ PS + G +GG E VHGSAPDIAG+ +ANP +LS LR +AD ++ A+ +A G RT D L G++ + T+A+ D Sbjct: 173 RIARVAFELARARGG-RVCSVDKSNVLES--GLLWREEVQACRDA--EYPDVELEHILVDNCALQLCLRPARFDVLLADNLFGDILSDAAGAVAGSLGMLPSASFGAEDGGRRRGFYEPVHGSAPDIAGQGIANPLGAILSLALALRWTFRQPAEADLLERAVERALAGGA-RTLDLLAGAAAPALSTRAMAD 359
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH_STRMU (Isocitrate dehydrogenase [NADP] OS=Streptococcus mutans GN=icd PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 6.302e-25 Identity = 68/207 (32.85%), Postives = 115/207 (55.56%), Query Frame = -1 Query: 239 LKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKY-------PEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG-EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYR---TADLGGSS-TTSDFTKAICDHL 823 +K I+ + S R+ A YA + +V+ +HK NI + T+G F K E+A++ ++ ++++ DN ++ P FDV+ + NL GD SD A +GG+G++P NI + G A+ EA HG+APDIAG++LANP+++LLS + ++ +D I A+ IA G+ +LG + TT F++ + +L Sbjct: 187 IKPISIEGSQRLIRAAIEYALANNLTKVTLVHKGNIQKFTEGGFRKWGYELAKREYAAELASGQLVVDDIIADNFLQQILLKPERFDVVALTNLNGDYASDALAAQVGGIGISPGANINYQTGHAIFEATHGTAPDIAGQDLANPSSVLLSGCMLFDYIGWSKVSDLIMKAVEKAIANGQVTIDFAKELGVEALTTRQFSEVLLTYL 393
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_MYCGI (3-isopropylmalate dehydrogenase OS=Mycobacterium gilvum (strain PYR-GCK) GN=leuB PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.404e-24 Identity = 66/188 (35.11%), Postives = 105/188 (55.85%), Query Frame = -1 Query: 287 VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGE--GGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAI---LSTIAEGKYRTADLG 835 + + + T RV + AF A+ R+ ++ +HK N++ L+ + + VA +YPE+ +D + +V +P FDV+V NL+GDII+DL A + GG+GL S NI ++ E VHGSAPDIAG+ +A+PTA ++S +L H+ D A R+ A+ L+T + K T +G Sbjct: 143 IATEVSVNTAYGVRRVVQDAFKRAQQR-RKHLTLVHKNNVLTNAGSLWWRTVQAVAAEYPEVEVAYQHVDAATIHMVTDPGRFDVIVTDNLFGDIITDLAAAVCGGIGLAASGNIDATLTNPSMFEPVHGSAPDIAGQGIADPTAAIMSVSLLLAHMAEIDAAARVDKAVAEHLATRGDEKLSTTQVG 329 The following BLAST results are available for this feature:
BLAST of CN188826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188826 ID=CN188826; Name=CN188826; organism=Citrus sinensis; type=EST; length=847bpback to top |