CN188826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_SPIPL (3-isopropylmalate dehydrogenase OS=Spirulina platensis GN=leuB PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.833e-24 Identity = 65/169 (38.46%), Postives = 99/169 (58.58%), Query Frame = -1 Query: 290 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 793 R+ F AK + R+ ++ KAN++ + L+ +A YPE+ + +DN M LV+ P FD +V NL+GDI+SD A L G +G+ PS ++G G + E VHGSAPDIAG++ ANP A +LS+ MLR+ L+ +D ++ A+L + G Y T D+ Sbjct: 173 RIGRVGFETAKKR-QGRLCSVDKANVLDVSQ-LWRDRIMALAADYPEVELSHLYVDNAAMQLVRWPKQFDTIVTGNLFGDILSDAAAMLTGSIGMLPSASLGASGPGVFEPVHGSAPDIAGQDKANPLAQVLSAAMMLRYGLDEPAASDPVEKAVLKVLDWG-YPTGDI 338
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_CORU7 (3-isopropylmalate dehydrogenase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=leuB PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.833e-24 Identity = 62/174 (35.63%), Postives = 102/174 (58.62%), Query Frame = -1 Query: 287 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG--EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIA---EGKYRTADLG 793 RV AF A+ R++++ +HK N++ GL+ + + +++P++ + ID + +V +P+ +DV+V NL+GDI++DL + GG+GL S NI ++ E VHGSAPDIAG+ +A+P A +LS MLRHL A++I+ A+L A RT ++G Sbjct: 158 RVVRDAFRRAQER-RKKLTWVHKTNVLVNAGGLWQRAIETIGKEFPDVEVDYNHIDAATIYMVTDPSRYDVIVTDNLFGDILTDLAGAVTGGIGLAASGNIDPTHNNPSMFEPVHGSAPDIAGQGIADPCAAILSVALMLRHLGDEANAEKIEKAVLDEAAGRDGSPIRTTEVG 330
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_SYNPX (3-isopropylmalate dehydrogenase OS=Synechococcus sp. (strain WH8102) GN=leuB PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.395e-24 Identity = 70/186 (37.63%), Postives = 108/186 (58.06%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 793 R+A AF A+ R + ++ KAN++ + L+ +A Y ++ + +DN M LV++P FDVL+ NL+GDI+SD A L G +G+ PS ++G L E VHGSAPDIAG++ ANP A++LS+ MLR L+ + A ++ A+ +A G +RT DL T+ +A+ D L Sbjct: 171 RIARVAFDLARER-RGNLCSVDKANVLDVSQ-LWRDRVDAMAPAYSDVEVSHMYVDNAAMQLVRSPRQFDVLLTGNLFGDILSDEAAMLTGSIGMLPSASLGSDCPGLFEPVHGSAPDIAGQDKANPMAMVLSAAMMLRIGLKQTEAAADLEAAVDKVLAAG-FRTGDLMAEGCTALGCRAMGDAL 353
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_RHOP2 (3-isopropylmalate dehydrogenase OS=Rhodopseudomonas palustris (strain HaA2) GN=leuB PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.395e-24 Identity = 74/182 (40.66%), Postives = 108/182 (59.34%), Query Frame = -1 Query: 272 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREV-AEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGE------GGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTT 793 R+ AF A+ R +V+++ K N+M KT L+ + +V A +Y ++ E + D+ M LVK P FDV+V NL+GD++SD+ A L G LG+ PS ++G A+ E VHGSAPDIAGK LANP A+L S LR+ L++ + AD++ AI +A G RTAD+ +T Sbjct: 172 RIGRVAFDLARKR-RNKVTSMEKRNVM-KTGVLWNEVITQVHAREYKDVQLEHQLADSGGMNLVKWPKQFDVIVTDNLFGDMLSDIAAMLTGSLGMLPSASLGAVDDTTGKRKAMYEPVHGSAPDIAGKGLANPVAMLASFGMALRYSLDMGELADKLDEAIAVVLARG-LRTADIKSEGST 350
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_PSEAE (3-isopropylmalate dehydrogenase OS=Pseudomonas aeruginosa GN=leuB PE=3 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 2.395e-24 Identity = 62/169 (36.69%), Postives = 97/169 (57.40%), Query Frame = -1 Query: 290 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 793 R+A F A+ R+ ++ KAN++ + L+ + EVA+ YP++ + +DN M LV+ P FDV+V N++GDI+SD + L G +G+ PS ++ + E HGSAPDIAG+ +ANP A +LS MLR+ AD I+ A+ + +G RT D+ Sbjct: 171 RIARVGFDMARVRNN-RLCSVDKANVLASSQ-LWREVVEEVAKDYPDVELSHMYVDNAAMQLVRAPKQFDVMVTDNMFGDILSDEASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFSQATAADAIEQAVSKVLDQG-LRTGDI 336
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_MYCSS (3-isopropylmalate dehydrogenase OS=Mycobacterium sp. (strain MCS) GN=leuB PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.395e-24 Identity = 64/174 (36.78%), Postives = 103/174 (59.20%), Query Frame = -1 Query: 287 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG--EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAI---LSTIAEGKYRTADLG 793 RV E AF A+ R+ ++ +HK N++ L+ + +EV +YP++ +D+ + +V +P FDV+V NL+GDI++DL A + GG+GL S NI ++ E VHGSAPDIAG+ +A+PTA ++S +L H+ D A R+ A+ LS+ + + TA +G Sbjct: 157 RVVEDAFRRAQQR-RKHLTLVHKNNVLTFAGALWWRTVQEVGAEYPDVEIAYQHVDSAMIHIVTDPGRFDVIVTDNLFGDIVTDLAAAVCGGIGLAASGNIDATRTNPSMFEPVHGSAPDIAGQGIADPTAAIMSVALLLAHVGETDAAARVDKAVEAHLSSRGDQELGTAAVG 329
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_MYCSK (3-isopropylmalate dehydrogenase OS=Mycobacterium sp. (strain KMS) GN=leuB PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.395e-24 Identity = 64/174 (36.78%), Postives = 103/174 (59.20%), Query Frame = -1 Query: 287 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG--EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAI---LSTIAEGKYRTADLG 793 RV E AF A+ R+ ++ +HK N++ L+ + +EV +YP++ +D+ + +V +P FDV+V NL+GDI++DL A + GG+GL S NI ++ E VHGSAPDIAG+ +A+PTA ++S +L H+ D A R+ A+ LS+ + + TA +G Sbjct: 157 RVVEDAFRRAQQR-RKHLTLVHKNNVLTFAGALWWRTVQEVGAEYPDVEIAYQHVDSAMIHIVTDPGRFDVIVTDNLFGDIVTDLAAAVCGGIGLAASGNIDATRTNPSMFEPVHGSAPDIAGQGIADPTAAIMSVALLLAHVGETDAAARVDKAVEAHLSSRGDQELGTAAVG 329
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_MYCSJ (3-isopropylmalate dehydrogenase OS=Mycobacterium sp. (strain JLS) GN=leuB PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.395e-24 Identity = 64/174 (36.78%), Postives = 103/174 (59.20%), Query Frame = -1 Query: 287 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG--EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAI---LSTIAEGKYRTADLG 793 RV E AF A+ R+ ++ +HK N++ L+ + +EV +YP++ +D+ + +V +P FDV+V NL+GDI++DL A + GG+GL S NI ++ E VHGSAPDIAG+ +A+PTA ++S +L H+ D A R+ A+ LS+ + + TA +G Sbjct: 157 RVVEDAFRRAQQR-RKHLTLVHKNNVLTFAGALWWRTVQEVGAEYPDVEIAYQHVDSAMIHIVTDPGRFDVIVTDNLFGDIVTDLAAAVCGGIGLAASGNIDATRTNPSMFEPVHGSAPDIAGQGIADPTAAIMSVALLLAHVGETDAAARVDKAVEAHLSSRGDQELGTAAVG 329
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_RHOS4 (3-isopropylmalate dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=leuB PE=3 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 3.127e-24 Identity = 75/186 (40.32%), Postives = 107/186 (57.53%), Query Frame = -1 Query: 284 TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVA----EKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI-----ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGG 811 T + RVA AF A+ RV ++ KAN+M+ G+ + EV +YP++ + DN M LV+ P FDV+V NL+GDI+SD A L G LG+ PS ++G AL E VHGSAPDIAG+ ANP A +LS LR+ ++ ++A R++ A+ + +A+G RTADL G Sbjct: 166 TTEEIRRVARSAFELARRRNN-RVCSMEKANVMES--GILWR--EEVQWVHDNEYPDVELSHMYADNGAMQLVRWPRQFDVIVTDNLFGDILSDCAAMLTGSLGMLPSASLGAPMANGRPKALYEPVHGSAPDIAGQGKANPIACILSFAMALRYSFDMGEEATRLEKAVETVLADG-VRTADLMG 345
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_RHOPA (3-isopropylmalate dehydrogenase OS=Rhodopseudomonas palustris GN=leuB PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.085e-24 Identity = 72/182 (39.56%), Postives = 109/182 (59.89%), Query Frame = -1 Query: 272 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEK-YPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI------ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTT 793 R+ AF A+ R +V+++ K N+M KT L+ + V ++ Y ++ + + D+ M LVK P FDV+V NL+GD++SD+ A L G LG+ PS ++GE ++ E VHGSAPDIAGK +ANP A+L S LR+ L++ AD++ AI + +A+G RTAD+ TT Sbjct: 172 RIGRVAFDLARKR-RNKVTSMEKRNVM-KTGVLWNEVITAVHDREYKDVQLDHQLADSGGMNLVKWPKQFDVIVTDNLFGDMLSDIAAMLTGSLGMLPSASLGEVDAKTGKRKSMYEPVHGSAPDIAGKGMANPVAMLASFGMALRYSLDMGALADKLDEAIAAVLAKG-LRTADIKSEGTT 350 The following BLAST results are available for this feature:
BLAST of CN188826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188826 ID=CN188826; Name=CN188826; organism=Citrus sinensis; type=EST; length=847bpback to top |