CN188826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_PHACH (3-isopropylmalate dehydrogenase OS=Phanerochaete chrysosporium GN=LEU2 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.135e-16 Identity = 59/187 (31.55%), Postives = 98/187 (52.41%), Query Frame = -1 Query: 239 VSAIHKANIMQKTDGLFLKCCRE-VAEKYPEITYEEVVIDNCCMMLVKNPAAFD-VLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI------------ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLEL-HDKADRIQNAILSTIAEGK----YRTADLGGSSTTSDFTKAICDHL 742 V +I KAN++ + L+ K E + ++P++ + ++D+ M++V NP + V++ NL+GDI+SD + + G LGL PS ++ + + E +HGSAPDIAG+ +ANP +LS+ + + A I+ A+ +G RTADLGGSS T D + + L Sbjct: 191 VHSIDKANVLASSR-LWRKVATETIQNEFPQLKLDHHLVDSASMLIVANPKKLNGVILTENLFGDILSDESSVIPGSLGLLPSASLAARPLWPNTAHRRSSPRRVYEPIHGSAPDIAGQGIANPIGTILSAAMLCGTRSVWRSPAKAIEAAVEGARRQGDRREGLRTADLGGSSKTKDIGHKVVEIL 376
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH_SYNY3 (Isocitrate dehydrogenase [NADP] OS=Synechocystis sp. (strain PCC 6803) GN=icd PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.115e-13 Identity = 49/145 (33.79%), Postives = 74/145 (51.03%), Query Frame = -1 Query: 242 EITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIA--EGKYRTADLGGSST-----TSDFTKAICDH 655 ++ + + D+ + P + +L NL GD +SD A ++GGLG+ P NIG+ A+ EA HG+AP AG + NP +++LS V ML + + AD I+ I + IA E Y A L S+F +AI H Sbjct: 329 KVMVNDRIADSIFQQIQTRPDEYSILATMNLNGDYLSDAAAAVVGGLGMGPGANIGDSA-AIFEATHGTAPKHAGLDRINPGSVILSGVMMLEFMGWQEAADLIKKGIGAAIANREVTYDLARLMEPKVDKPLKCSEFAQAIVSH 472
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: IDH_ANASP (Isocitrate dehydrogenase [NADP] OS=Anabaena sp. (strain PCC 7120) GN=icd PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.456e-13 Identity = 39/116 (33.62%), Postives = 64/116 (55.17%), Query Frame = -1 Query: 308 EITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGK 655 ++ + + D+ + P + +L NL GD +SD A ++GGLG+ P NIG+ A+ EA HG+AP AG + NP +++LS V ML ++ + AD I+ + IA + Sbjct: 329 KVLVNDRIADSIFQQIQTRPDEYSILATMNLNGDYLSDAAAAIVGGLGMGPGANIGD-SCAVFEATHGTAPKHAGLDRINPGSVILSGVMMLEYMGWQEAADLIKKGLSDAIANSQ 443 The following BLAST results are available for this feature:
BLAST of CN188826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188826 ID=CN188826; Name=CN188826; organism=Citrus sinensis; type=EST; length=847bpback to top |