CN188826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_BACHD (3-isopropylmalate dehydrogenase OS=Bacillus halodurans GN=leuB PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.699e-34 Identity = 80/198 (40.40%), Postives = 124/198 (62.63%), Query Frame = -1 Query: 245 VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 835 VV++L + TR R+ AF A + V+++ KAN+++ + ++ + EVA+++PE+T E +++DN M L++ P FDVLV NL+GDI+SD + + G LG+ PS ++ G L E +HGSAPDIAGK +ANP A + S ML++ LH++A I++AI + + +G YRTAD+ S TKAI D Sbjct: 157 VVDTL-LYTRGEMRRIIRKAFELAMVRNKH-VTSVDKANVLESSR-MWREVANEVAQEFPEVTLEHMLVDNAAMQLIRRPKQFDVLVTENLFGDILSDEASMVTGSLGMLPSASLTSDGPGLYEPIHGSAPDIAGKGVANPLATIASCAMMLKYSFGLHEEAKTIEDAIEAVLKQG-YRTADIAKPGEESSSTKAITD 350
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_LISMO (3-isopropylmalate dehydrogenase OS=Listeria monocytogenes GN=leuB PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.267e-33 Identity = 79/188 (42.02%), Postives = 118/188 (62.77%), Query Frame = -1 Query: 251 TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 811 TR R+ E AF A T + +V+++ KAN++ + L+ K EVA ++P+IT E + ID M++++ P FDV+V NL+GDI+SD + + G LG+ PS + E G +L E +HGSAPDIA +N+ANP +++ S MLR L +AD I A T+ G + TADLGG++TT+DFT + Sbjct: 158 TRAEIERIIEKAFEIAATRNK-KVTSVDKANVLASSK-LWRKIAEEVASRHPDITLEHLYIDAAAMLMIQRPTTFDVIVTENLFGDILSDEASVITGSLGMLPSASHAENGPSLYEPIHGSAPDIANQNIANPMSMISSVSMMLRQSFSLFKEADAIDAAATRTMQAG-FLTADLGGNTTTTDFTNEV 342
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_BACHK (3-isopropylmalate dehydrogenase OS=Bacillus thuringiensis subsp. konkukian GN=leuB PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.822e-33 Identity = 78/186 (41.94%), Postives = 117/186 (62.90%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTML-RHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 793 R+ YAF A +++V++I KAN+++ + L+ EVA +YP++ E +++D M L++NP FDV+V NL+GDI+SD + L G LG+ PS + E G +L E +HGSAPDIAGKN ANP A++ S ML + L + I+ AI + + GK TAD+GG+ TT+ FTKA+ + Sbjct: 162 RIVSYAFQLASKR-KKKVTSIDKANVLESSK-LWRTVTEEVALRYPDVELEHILVDAAAMELIRNPGRFDVIVTENLFGDILSDEASVLAGSLGMLPSASHAEKGPSLYEPIHGSAPDIAGKNKANPIAMMRSVAMMLGQSFGLTREGCAIEEAISAVLKSGKC-TADIGGAETTTSFTKAVMQEM 344
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_PASMU (3-isopropylmalate dehydrogenase OS=Pasteurella multocida GN=leuB PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.686e-33 Identity = 78/173 (45.09%), Postives = 111/173 (64.16%), Query Frame = -1 Query: 278 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSS 793 R+A AF A + V+++ KAN++ + L+ + +VA+ YPE+T + + IDN M L+K P FDVL+ N++GDIISD CA + G +G+ PS ++ E G L E GSAPDIAGK +ANP A +LS+ MLRH L+D A I+NA+ + +AEG +RTADL S Sbjct: 173 RIARVAFETAMKRSKH-VTSVDKANVLISSV-LWREVVCDVAKDYPEVTLDHIYIDNATMQLIKQPEFFDVLLCSNIFGDIISDECAMITGSMGMLPSASLNEKGFGLYEPAGGSAPDIAGKGIANPIAQILSAAMMLRHSFNLNDAATAIENAVKNVLAEG-HRTADLADES 342
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_LISMF (3-isopropylmalate dehydrogenase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=leuB PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.686e-33 Identity = 77/188 (40.96%), Postives = 119/188 (63.30%), Query Frame = -1 Query: 251 TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 811 TR R+ E AF A T + +V+++ KAN++ + L+ K EVA ++P+IT E + +D M++++ P FDV+V NL+GDI+SD + + G LG+ PS + E G +L E +HGSAPDIA +N+ANP +++ S MLR L ++AD I A T+ G + TADLGG+++T+DFT + Sbjct: 158 TRAEIERIIEKAFEIAATRNK-KVTSVDKANVLASSK-LWRKIADEVASRHPDITLEHLYVDAAAMLMIQRPTTFDVIVTENLFGDILSDEASVITGSLGMLPSASHAENGPSLYEPIHGSAPDIANQNIANPMSMISSVSMMLRQSFSLFEEADAIDAATARTMQAG-FLTADLGGNTSTTDFTNEV 342
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_HAEIN (3-isopropylmalate dehydrogenase OS=Haemophilus influenzae GN=leuB PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.686e-33 Identity = 77/174 (44.25%), Postives = 114/174 (65.52%), Query Frame = -1 Query: 275 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSST 793 R+A AF A + +V+++ KAN++Q + L+ + E+A+ YPE+T E + IDN M L+K+P +FDVL+ N++GDIISD A + G +G+ PS ++ E G L E GSAPDIAGK +ANP A +LS+ MLR+ L++ AD I++A+ +A G +RTADL ST Sbjct: 173 RIARAAFEAAMKRNK-KVTSVDKANVLQSSI-LWRETVTEMAKDYPEVTLEHIYIDNATMQLIKSPESFDVLLCSNIFGDIISDEAAMITGSMGMLPSASLNEEGFGLYEPAGGSAPDIAGKGIANPIAQILSAAMMLRYSFNLNEAADAIESAVQKVLASG-HRTADLADDST 343
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_LISIN (3-isopropylmalate dehydrogenase OS=Listeria innocua GN=leuB PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.814e-33 Identity = 77/188 (40.96%), Postives = 118/188 (62.77%), Query Frame = -1 Query: 251 TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 811 TR R+ E AF A T + +V+++ KAN++ + L+ K EVA ++P+IT E + +D M++++ P FDV+V NL+GDI+SD + + G LG+ PS + E G +L E +HGSAPDIA +N+ANP +++ S MLR L +AD I A T+ G + TADLGG+++T+DFT + Sbjct: 158 TRVEIERIIEKAFEIASTRNK-KVTSVDKANVLASSK-LWRKIAEEVASRHPDITLEHLYVDAAAMLMIQRPTTFDVIVTENLFGDILSDEASVITGSLGMLPSASHAENGPSLYEPIHGSAPDIANQNIANPMSMISSVSMMLRQSFSLFKEADAIDAATARTMQAG-FLTADLGGNTSTTDFTNEV 342
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_HAEI8 (3-isopropylmalate dehydrogenase OS=Haemophilus influenzae (strain 86-028NP) GN=leuB PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.814e-33 Identity = 77/174 (44.25%), Postives = 113/174 (64.94%), Query Frame = -1 Query: 275 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSST 793 R+A AF A + +V+++ KAN++Q + L+ + E+A+ YPE+T E + IDN M L+K P +FDVL+ N++GDIISD A + G +G+ PS ++ E G L E GSAPDIAGK +ANP A +LS+ MLR+ L++ AD I++A+ +A G +RTADL ST Sbjct: 173 RIARAAFEAAMKRNK-KVTSVDKANVLQSSI-LWRETVTEMAKDYPEVTLEHIYIDNATMQLIKAPESFDVLLCSNIFGDIISDEAAMITGSMGMLPSASLNEAGFGLYEPAGGSAPDIAGKGIANPIAQILSAAMMLRYSFNLNEAADAIESAVQKVLASG-HRTADLADDST 343
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_BACCR (3-isopropylmalate dehydrogenase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=leuB PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.287e-33 Identity = 77/186 (41.40%), Postives = 116/186 (62.37%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTML-RHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 793 R+ YAF A +++V++I KAN+++ + L+ EVA +YP + E +++D M L++NP FDV+V NL+GDI+SD + L G LG+ PS + E G +L E +HGSAPDIAGKN ANP A++ S ML + L + I+ A+ + + GK TAD+GG+ TT+ FTKA+ + Sbjct: 162 RIVSYAFQLANKR-KKKVTSIDKANVLESSK-LWRTVTEEVALRYPNVEVEHILVDAAAMELIRNPGRFDVIVTENLFGDILSDEASVLAGSLGMLPSASHAEKGPSLYEPIHGSAPDIAGKNKANPIAMMRSVAMMLGQSFGLTREGYAIEEAVSAVLKSGKC-TADIGGTETTTSFTKAVIQEM 344
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_BACC1 (3-isopropylmalate dehydrogenase OS=Bacillus cereus (strain ATCC 10987) GN=leuB PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.287e-33 Identity = 78/186 (41.94%), Postives = 117/186 (62.90%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTML-RHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 793 R+ YAF A +++V++I KAN+++ + L+ EVA +YP++ E +++D M L++NP FDV+V NL+GDI+SD + L G LG+ PS + E G +L E +HGSAPDIAGKN ANP A++ S ML + L + I+ AI + + GK TAD+GG+ TT+ FTKA+ + Sbjct: 162 RIVSYAFQLASKR-KKKVTSIDKANVLESSK-LWRTVTEEVALRYPDVELEHILVDAAAMELIRNPGRFDVIVTENLFGDILSDEASVLAGSLGMLPSASHAEKGPSLYEPIHGSAPDIAGKNKANPIAMMRSVAMMLGQSFGLTREGCAIEEAISAVLKLGKC-TADIGGTETTTSFTKAVMQEM 344 The following BLAST results are available for this feature:
BLAST of CN188826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188826 ID=CN188826; Name=CN188826; organism=Citrus sinensis; type=EST; length=847bpback to top |