CN188826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_BACCZ (3-isopropylmalate dehydrogenase OS=Bacillus cereus (strain ZK / E33L) GN=leuB PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.072e-32 Identity = 77/186 (41.40%), Postives = 116/186 (62.37%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTML-RHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 793 R+ YAF A +++V++I KAN+++ + L+ EVA +YP++ E +++D M L++NP FDV+V NL+GDI+SD + L G LG+ PS + E G +L E +HGSAPDIAGKN ANP A++ S ML + L + I+ AI + + GK T D+GG+ TT+ FTKA+ + Sbjct: 162 RIVSYAFQLASKR-KKKVTSIDKANVLESSK-LWRTVTEEVALRYPDVELEHILVDAAAMELIRNPGRFDVIVTENLFGDILSDEASVLAGSLGMLPSASHAEKGPSLYEPIHGSAPDIAGKNKANPIAMMRSVAMMLGQSFGLTREGCAIEEAISAVLKSGKC-TEDIGGTETTTSFTKAVMQEM 344
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_YERPS (3-isopropylmalate dehydrogenase OS=Yersinia pseudotuberculosis GN=leuB PE=3 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 2.389e-32 Identity = 77/171 (45.03%), Postives = 109/171 (63.74%), Query Frame = -1 Query: 284 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGG 793 R+A AF A+ R +V++I KAN++Q + L+ + +A YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E GSAPDIAGKN+ANP A +LS + +LR L D AD I+ AI + +G YRTADL G Sbjct: 174 RIARIAFESARKR-RSKVTSIDKANVLQSSI-LWREVVNGIAADYPDVALSHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLILLLRFSLGKDDAADAIERAINQALEQG-YRTADLAG 341
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_ERWCT (3-isopropylmalate dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=leuB PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.389e-32 Identity = 77/173 (44.51%), Postives = 113/173 (65.32%), Query Frame = -1 Query: 278 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSS 793 R+A AF A+ R V++I KAN++Q + L+ + EVA+ YP++ + IDN M L+K+P+ FDV++ NL+GDI+SD CA + G +G+ PS ++ E G L E GSAPDIAGK++ANP A +LS +LR+ L D A+ I+ A+ + +AEG YRTADL +S Sbjct: 174 RIAHIAFESARKR-RSIVTSIDKANVLQSSI-LWREIVTEVAKAYPDVKLSHLYIDNATMQLIKDPSQFDVMLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKDIANPIAQILSLALLLRYSLGADDAAEAIEKAVNTALAEG-YRTADLASAS 343
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_MANSM (3-isopropylmalate dehydrogenase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=leuB PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.120e-32 Identity = 76/174 (43.68%), Postives = 114/174 (65.52%), Query Frame = -1 Query: 275 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSST 793 R+A AF A R++V+++ KAN++Q + L+ + E+A++YPE+ E + IDN M L+K P +FDVL+ N++GDIISD A + G +G+ PS ++ E G L E GSAPDIAGK +ANP A +LS+ MLR+ L++ A I+NA+ +A+G +RT DL +ST Sbjct: 173 RIARAAFDAAMKR-RKQVTSVDKANVLQSSI-LWRETVAEIAKEYPEVQVENMYIDNATMQLIKAPESFDVLLCSNIFGDIISDEAAMITGSMGMLPSASLNEEGFGLYEPAGGSAPDIAGKGIANPIAQILSAAMMLRYSFNLNEAATAIENAVQKVLADG-HRTGDLADNST 343
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_ZYMMO (3-isopropylmalate dehydrogenase OS=Zymomonas mobilis GN=leuB PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.322e-32 Identity = 78/182 (42.86%), Postives = 110/182 (60.44%), Query Frame = -1 Query: 251 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 793 R+A F A++ S I K+N+++ T L+ E+A++YP++ + +DN M LV+ P FDV+V NL+GDI+SDL + +G +GL PS ++ G L E +HGSAPDIAG ANP A +LS MLR+ L+ ADRI+ A+ ST E RTADLGG TTS+ A+ Sbjct: 166 RIARIGFETARSRSGNLCS-IDKSNVLE-TSQLWRTVVLEIAQEYPDVELSHMYVDNAAMQLVRAPDQFDVIVTGNLFGDILSDLASACVGSIGLLPSASLNSEGKGLYEPIHGSAPDIAGLGKANPLATILSGAMMLRYSLKREADADRIEKAV-STALEKGARTADLGGKMTTSEMGNAV 344
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_YERPE (3-isopropylmalate dehydrogenase OS=Yersinia pestis GN=leuB PE=3 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 5.322e-32 Identity = 77/171 (45.03%), Postives = 108/171 (63.16%), Query Frame = -1 Query: 284 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGG 793 R+A AF A+ R +V++I KAN++Q + L+ + +A YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E GSAPDIAGKN+ANP A +LS +LR L D AD I+ AI + +G YRTADL G Sbjct: 174 RIARIAFESARKR-RSKVTSIDKANVLQSSI-LWREVVNGIAADYPDVALSHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLTLLLRFSLGKDDAADAIERAINQALEQG-YRTADLAG 341
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_BACAN (3-isopropylmalate dehydrogenase OS=Bacillus anthracis GN=leuB PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.322e-32 Identity = 77/186 (41.40%), Postives = 116/186 (62.37%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTML-RHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 793 R+ AF A +++V++I KAN+++ + L+ EVA +YP++ E +++D M L++NP FDV+V NL+GDI+SD + L G LG+ PS + E G +L E +HGSAPDIAGKN ANP A++ S ML + L + I+ AI + + GK TAD+GG+ TT+ FTKA+ + Sbjct: 162 RIVSCAFQLASKR-KKKVTSIDKANVLESSK-LWRIVTEEVALRYPDVELEHILVDAAAMELIRNPGRFDVIVTENLFGDILSDEASVLAGSLGMLPSASHAEKGPSLYEPIHGSAPDIAGKNKANPIAMMRSVAMMLGQSFGLTREGCAIEEAISAVLKSGKC-TADIGGTETTTSFTKAVMQEM 344
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_STAAC (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain COL) GN=leuB PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.951e-32 Identity = 78/192 (40.62%), Postives = 114/192 (59.38%), Query Frame = -1 Query: 239 TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 811 TR+ R+ AF A + R +++++ K N++ + L+ K EV++ YPE+T +++D C M L+ NP FDV+V NL+GDI+SD + + G LGL+PS + G L E +HGSAPDIAGKN+ANP ++LS LR L D AD ++ I S I G+ TADLGG T+D + + L Sbjct: 158 TREEIERIVHVAFKLAASR-RGKLTSVDKENVLASSK-LWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYSMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_STAA3 (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain USA300) GN=leuB PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.951e-32 Identity = 78/192 (40.62%), Postives = 114/192 (59.38%), Query Frame = -1 Query: 239 TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 811 TR+ R+ AF A + R +++++ K N++ + L+ K EV++ YPE+T +++D C M L+ NP FDV+V NL+GDI+SD + + G LGL+PS + G L E +HGSAPDIAGKN+ANP ++LS LR L D AD ++ I S I G+ TADLGG T+D + + L Sbjct: 158 TREEIERIVHVAFKLAASR-RGKLTSVDKENVLASSK-LWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYSMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_VIBCH (3-isopropylmalate dehydrogenase OS=Vibrio cholerae GN=leuB PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 9.078e-32 Identity = 75/172 (43.60%), Postives = 113/172 (65.70%), Query Frame = -1 Query: 281 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADR-IQNAILSTIAEGKYRTADLGGS 793 R+A AF A+ R++V +I KAN++Q + L+ + E+A++YP+++ + IDN M L+K+PA FDV++ N++GDI+SD CA + G +G+ PS ++ E L E GSAPDIAGKN+ANP A +LS+ MLR+ + A R I+NA+ +A G+ TADL GS Sbjct: 175 RIARIAFESARLR-RKKVCSIDKANVLQSSI-LWREVVSEIAKEYPDVSLSHMYIDNATMQLIKDPAQFDVMLCSNIFGDILSDECAMITGSMGMLPSASMNESKFGLYEPAGGSAPDIAGKNIANPVAQILSAALMLRYSLGEEAAARDIENAVSQALAAGEL-TADLAGS 343 The following BLAST results are available for this feature:
BLAST of CN188826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188826 ID=CN188826; Name=CN188826; organism=Citrus sinensis; type=EST; length=847bpback to top |