CN188826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_STAA8 (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain NCTC 8325) GN=leuB PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.186e-31 Identity = 78/192 (40.62%), Postives = 113/192 (58.85%), Query Frame = -1 Query: 239 TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 811 TR+ R+ AF A + R +++++ K N++ + L+ K EV++ YPE+T + +D C M L+ NP FDV+V NL+GDI+SD + + G LGL+PS + G L E +HGSAPDIAGKN+ANP ++LS LR L D AD ++ I S I G+ TADLGG T+D + + L Sbjct: 158 TREEIERIVHVAFKLAASR-RGKLTSVDKENVLASSK-LWRKVVNEVSQLYPEVTVNHLFVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYSMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_SODGM (3-isopropylmalate dehydrogenase OS=Sodalis glossinidius (strain morsitans) GN=leuB PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.186e-31 Identity = 75/174 (43.10%), Postives = 112/174 (64.37%), Query Frame = -1 Query: 275 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSST 793 R+A AF A+ R +V++I KAN++Q + L+ K +VA YP++ + IDN M L+K+P+ FDV++ NL+GDI+SD CA + G +G+ PS ++ E G + E GSAPDIAGK++ANP A +LS+ +LR+ L L D AD I+ A+ + G +RTADL G + Sbjct: 175 RIARIAFESARKR-RGKVTSIDKANVLQSSI-LWRKVVSQVAPDYPDVALSHLYIDNATMQLIKDPSQFDVMLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGMYEPAGGSAPDIAGKDIANPVAQILSASLLLRYSLGLDDAADAIELAVNQALEAG-HRTADLAGGGS 345
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_ECO57 (3-isopropylmalate dehydrogenase OS=Escherichia coli O157:H7 GN=leuB PE=3 SV=3) HSP 1 Score: 137.117 bits (344), Expect = 1.186e-31 Identity = 78/179 (43.58%), Postives = 114/179 (63.69%), Query Frame = -1 Query: 266 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL--GGSSTTSD 793 R+A AF A+ R +V++I KAN++Q + L+ + E+A +YP+I + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E GSAPDIAGKN+ANP A +LS +LR+ L+ D A I+ AI + EG RT DL G ++ ++D Sbjct: 174 RIARIAFESARKR-RHKVTSIDKANVLQSSI-LWREIVNEIATEYPDIELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAASAIERAINRALEEG-IRTGDLARGAAAVSTD 349
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_BLOFL (3-isopropylmalate dehydrogenase OS=Blochmannia floridanus GN=leuB PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.186e-31 Identity = 73/169 (43.20%), Postives = 109/169 (64.50%), Query Frame = -1 Query: 290 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 793 R+A +AF A+ R+ V++I KAN++ T L+ K EVA YP + + + +DN M L++NP+AFDV++ PNL+GDI+SD CA + G +G+ PS ++ E L E GSAPDIAGKN+ANP A +LS+ + R+ L+L+ A I+ A+ + G YRT D+ Sbjct: 175 RIAHFAFKLAQKR-RKHVTSIDKANVLH-TSMLWRKVVSEVASNYPNVHLQHLYVDNASMQLIRNPSAFDVILCPNLFGDILSDECAEINGSIGILPSASLNEHNFGLYEPAGGSAPDIAGKNIANPIAQILSTALLFRYSLKLNHVAITIEKAVYKALTLG-YRTQDI 340
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_THEAQ (3-isopropylmalate dehydrogenase OS=Thermus aquaticus GN=leuB PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.549e-31 Identity = 80/186 (43.01%), Postives = 115/186 (61.83%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 793 RVA+ AF A+ R ++++ KAN+++ + + K EV + YP++ + +D M LVKNPA FDV+V N++GDI+SDL + L G LGL PS ++G G + E VHGSAPDIAGK +ANPTA +LS+ ML H L + A R++ A+ + E DLGGS+ T FT+ + HL Sbjct: 164 RVAKVAFEAARKR-RRHLTSVDKANVLEVGE-FWRKTVEEVHKGYPDVALDHQYVDAMAMHLVKNPARFDVVVTGNIFGDILSDLASVLPGSLGLLPSASLGR-GTPVFEPVHGSAPDIAGKGIANPTAAILSAAMMLEHAFGLVELARRVEAAVAKALRETP--PPDLGGSAGTQAFTEEVLRHL 344
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_STAAW (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=leuB PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.549e-31 Identity = 77/192 (40.10%), Postives = 114/192 (59.38%), Query Frame = -1 Query: 239 TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 811 TR+ R+ AF A + R +++++ K N++ + L+ K EV++ YPE+T +++D C M L+ NP FDV+V NL+GDI+SD + + G LGL+PS + G L E +HGSAPDIAGKN+ANP ++LS LR L D AD ++ I + I G+ TADLGG T+D + + L Sbjct: 158 TREEIERIVHVAFKLAASR-RGKLTSVDKENVLASSK-LWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_STAAS (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain MSSA476) GN=leuB PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.549e-31 Identity = 77/192 (40.10%), Postives = 114/192 (59.38%), Query Frame = -1 Query: 239 TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 811 TR+ R+ AF A + R +++++ K N++ + L+ K EV++ YPE+T +++D C M L+ NP FDV+V NL+GDI+SD + + G LGL+PS + G L E +HGSAPDIAGKN+ANP ++LS LR L D AD ++ I + I G+ TADLGG T+D + + L Sbjct: 158 TREEIERIVHVAFKLAASR-RGKLTSVDKENVLASSK-LWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_STAAR (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=leuB PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.549e-31 Identity = 77/192 (40.10%), Postives = 114/192 (59.38%), Query Frame = -1 Query: 239 TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 811 TR+ R+ AF A + R +++++ K N++ + L+ K EV++ YPE+T +++D C M L+ NP FDV+V NL+GDI+SD + + G LGL+PS + G L E +HGSAPDIAGKN+ANP ++LS LR L D AD ++ I + I G+ TADLGG T+D + + L Sbjct: 158 TREEIERIVHVAFKLAASR-RGKLTSVDKENVLASSK-LWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVYENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_STAAN (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain N315) GN=leuB PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.549e-31 Identity = 77/192 (40.10%), Postives = 114/192 (59.38%), Query Frame = -1 Query: 239 TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 811 TR+ R+ AF A + R +++++ K N++ + L+ K EV++ YPE+T +++D C M L+ NP FDV+V NL+GDI+SD + + G LGL+PS + G L E +HGSAPDIAGKN+ANP ++LS LR L D AD ++ I + I G+ TADLGG T+D + + L Sbjct: 158 TREEIERIVHVAFKLAASR-RGKLTSVDKENVLASSK-LWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_STAAM (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=leuB PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.549e-31 Identity = 77/192 (40.10%), Postives = 114/192 (59.38%), Query Frame = -1 Query: 239 TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 811 TR+ R+ AF A + R +++++ K N++ + L+ K EV++ YPE+T +++D C M L+ NP FDV+V NL+GDI+SD + + G LGL+PS + G L E +HGSAPDIAGKN+ANP ++LS LR L D AD ++ I + I G+ TADLGG T+D + + L Sbjct: 158 TREEIERIVHVAFKLAASR-RGKLTSVDKENVLASSK-LWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346 The following BLAST results are available for this feature:
BLAST of CN188826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188826 ID=CN188826; Name=CN188826; organism=Citrus sinensis; type=EST; length=847bpback to top |