CN188826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_STAAB (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=leuB PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.549e-31 Identity = 77/192 (40.10%), Postives = 114/192 (59.38%), Query Frame = -1 Query: 239 TRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 811 TR+ R+ AF A + R +++++ K N++ + L+ K EV++ YPE+T +++D C M L+ NP FDV+V NL+GDI+SD + + G LGL+PS + G L E +HGSAPDIAGKN+ANP ++LS LR L D AD ++ I + I G+ TADLGG T+D + + L Sbjct: 158 TREEIERIVHVAFKLAASR-RGKLTSVDKENVLASSK-LWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIENGQ-TTADLGGKLNTTDIFEILSQKL 346
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_SHIFL (3-isopropylmalate dehydrogenase OS=Shigella flexneri GN=leuB PE=3 SV=3) HSP 1 Score: 136.732 bits (343), Expect = 1.549e-31 Identity = 77/179 (43.02%), Postives = 114/179 (63.69%), Query Frame = -1 Query: 266 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL--GGSSTTSD 793 R+A AF A+ R +V++I KAN++Q + L+ + E+A +YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E GSAPDIAGKN+ANP A +LS +LR+ L+ D A I+ AI + EG RT DL G ++ ++D Sbjct: 174 RIARIAFESARKR-RHKVTSIDKANVLQSSI-LWREIVNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAASAIERAINRALEEG-IRTGDLARGAAAVSTD 349
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_ECOUT (3-isopropylmalate dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=leuB PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.549e-31 Identity = 77/179 (43.02%), Postives = 114/179 (63.69%), Query Frame = -1 Query: 266 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL--GGSSTTSD 793 R+A AF A+ R +V++I KAN++Q + L+ + E+A +YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E GSAPDIAGKN+ANP A +LS +LR+ L+ D A I+ AI + EG RT DL G ++ ++D Sbjct: 175 RIARIAFESARKR-RHKVTSIDKANVLQSSI-LWREIVNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAASAIERAINRALEEG-IRTGDLARGAAAVSTD 350
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_ECOL6 (3-isopropylmalate dehydrogenase OS=Escherichia coli O6 GN=leuB PE=3 SV=3) HSP 1 Score: 136.732 bits (343), Expect = 1.549e-31 Identity = 77/179 (43.02%), Postives = 114/179 (63.69%), Query Frame = -1 Query: 266 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL--GGSSTTSD 793 R+A AF A+ R +V++I KAN++Q + L+ + E+A +YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E GSAPDIAGKN+ANP A +LS +LR+ L+ D A I+ AI + EG RT DL G ++ ++D Sbjct: 174 RIARIAFESARKR-RHKVTSIDKANVLQSSI-LWREIVNEIATEYPDVELTHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAASAIERAINRALEEG-IRTGDLARGAAAVSTD 349
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_THET2 (3-isopropylmalate dehydrogenase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=leuB PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.022e-31 Identity = 80/186 (43.01%), Postives = 113/186 (60.75%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 793 RVA AF A+ R+ V ++ KAN+++ + + K EV YP++ E +D M LV++PA FDV+V N++GDI+SDL + L G LGL PS ++G G + E VHGSAPDIAGK LANPTA +LS+ ML H L + A ++++A+ + E DLGGS+ T FT + HL Sbjct: 164 RVARVAFEAARKR-RKHVVSVDKANVLEVGE-FWRKTVEEVGRGYPDVALEHQYVDAMAMHLVRSPARFDVVVTGNIFGDILSDLASVLPGSLGLLPSASLGR-GTPVFEPVHGSAPDIAGKGLANPTAAILSAAMMLEHAFGLVELARKVEDAVAKALLEAP--PPDLGGSAGTEAFTATVLRHL 344
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_STRR6 (3-isopropylmalate dehydrogenase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=leuB PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.022e-31 Identity = 75/186 (40.32%), Postives = 119/186 (63.98%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 793 R+ AF A+ R+ V++I K N++ T L+ K EVA+ +P++T E ++D+ M+++ NPA FDV+V NL+GDI+SD + L G LG+ PS + E G +L E +HGSAPDIAG+ +ANP +++LS V MLR ++ +RI+ A+ +++A G T D+GG ++T + +AI L Sbjct: 163 RIIRKAFEIARNR-RKIVTSIDKQNVLA-TSKLWRKVAEEVAQDFPDVTLEHQLVDSAAMLMITNPAKFDVIVTENLFGDILSDESSVLSGTLGVMPSASHSENGPSLYEPIHGSAPDIAGQGIANPISMILSVVMMLRDSFGRYEDTERIKRAVETSLAAG-ILTRDIGGQASTKEMMEAIIARL 345
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_SHIDS (3-isopropylmalate dehydrogenase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=leuB PE=3 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 2.022e-31 Identity = 77/179 (43.02%), Postives = 114/179 (63.69%), Query Frame = -1 Query: 266 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL--GGSSTTSD 793 R+A AF A+ R +V++I KAN++Q + L+ + E+A +YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E GSAPDIAGKN+ANP A +LS +LR+ L+ D A I+ AI + EG RT DL G ++ ++D Sbjct: 174 RIARIAFESARKR-RHKVTSIDKANVLQSSI-LWREIVNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAASAIERAINRALEEG-IRTRDLARGAAAVSTD 349
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_SALTY (3-isopropylmalate dehydrogenase OS=Salmonella typhimurium GN=leuB PE=1 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 2.022e-31 Identity = 77/179 (43.02%), Postives = 115/179 (64.25%), Query Frame = -1 Query: 266 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL--GGSSTTSD 793 R+A AF A+ R +V++I KAN++Q + L+ + +VA+ YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E GSAPDIAGKN+ANP A +LS +LR+ L+ +D A I+ AI + EG RT DL G ++ ++D Sbjct: 174 RIARIAFESARKR-RRKVTSIDKANVLQSSI-LWREIVNDVAKTYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDANDAATAIEQAINRALEEG-VRTGDLARGAAAVSTD 349
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_SALPA (3-isopropylmalate dehydrogenase OS=Salmonella paratyphi A GN=leuB PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.022e-31 Identity = 77/179 (43.02%), Postives = 115/179 (64.25%), Query Frame = -1 Query: 266 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL--GGSSTTSD 793 R+A AF A+ R +V++I KAN++Q + L+ + +VA+ YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E GSAPDIAGKN+ANP A +LS +LR+ L+ +D A I+ AI + EG RT DL G ++ ++D Sbjct: 174 RIARIAFESARKR-RRKVTSIDKANVLQSSI-LWREIVNDVAKTYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDANDAATAIEQAINRALEEG-VRTGDLARGAAAVSTD 349
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_SALCH (3-isopropylmalate dehydrogenase OS=Salmonella choleraesuis GN=leuB PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.022e-31 Identity = 77/179 (43.02%), Postives = 115/179 (64.25%), Query Frame = -1 Query: 266 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL--GGSSTTSD 793 R+A AF A+ R +V++I KAN++Q + L+ + +VA+ YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E GSAPDIAGKN+ANP A +LS +LR+ L+ +D A I+ AI + EG RT DL G ++ ++D Sbjct: 174 RIARIAFESARKR-RRKVTSIDKANVLQSSI-LWREIVNDVAKTYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDANDAATAIEQAINRALEEG-VRTGDLARGAAAVSTD 349 The following BLAST results are available for this feature:
BLAST of CN188826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188826 ID=CN188826; Name=CN188826; organism=Citrus sinensis; type=EST; length=847bpback to top |