CN188826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_NOVAD (3-isopropylmalate dehydrogenase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=leuB PE=3 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 2.022e-31 Identity = 80/191 (41.88%), Postives = 116/191 (60.73%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGE-----GGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 793 R+A AF A ++R+ ++ KAN+++ T L+ EVA+ YPE+ E + +DN M LV+ P FDV+V NL+GDI+SD + +G +GL S ++GE G L E +HGSAPDIAGK LANP A +LS+ +LRH L L ADRI+ A+ +A+G DLGG++ T++ A+ L Sbjct: 165 RIAHVAFRAAMGR-KKRLCSVDKANVLE-TSQLWRDVMLEVAKDYPEVALEHMYVDNAAMQLVRAPGNFDVVVTGNLFGDILSDQASMCVGSIGLLASASLGERETEYGTFGLYEPIHGSAPDIAGKGLANPMATILSAAMLLRHSLGLEVAADRIEAAVAKALADG-VLGRDLGGTAGTTEIGDAVLARL 352
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_BUCUO (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Uroleucon obscurum GN=leuB PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.022e-31 Identity = 72/173 (41.62%), Postives = 113/173 (65.32%), Query Frame = -1 Query: 278 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSS 793 R+A AF A++ +V +I K+N++ + L+ + ++V++ YP++ + IDN M ++KNP FDVL+ PNL+GDIISD CA + G +G+ PS ++ E L E GSAPDIAGKN+ANP A +LS ++R+ + L D AD+I ++LS + +G YRTAD+ ++ Sbjct: 175 RIAHLAFQLAQSRSH-KVCSIDKSNVLNSSI-LWKEIVQKVSKNYPDVDLSHLYIDNAIMQIIKNPNQFDVLLCPNLFGDIISDECAIITGSIGMLPSASLNEKKFGLYEPAGGSAPDIAGKNIANPIAQILSLSMLVRYGMNLKDIADKIDKSVLSVLKKG-YRTADISNNN 344
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_VIBVY (3-isopropylmalate dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=leuB PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.641e-31 Identity = 75/171 (43.86%), Postives = 110/171 (64.33%), Query Frame = -1 Query: 284 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGG 793 R+A+ AF A+ R++V +I KAN++Q + L+ + E+A+ YP++ + IDN M L+K+PA FDV++ N++GDIISD CA + G +G+ PS ++ E L E GSAPDIAGKN+ANP A +LS+ MLR+ L A I+NA+ +A G+ TADL G Sbjct: 175 RIAKIAFESARLR-RKKVCSIDKANVLQSSI-LWREVVEEIAKDYPDVELSHMYIDNATMQLIKDPAQFDVMLCSNIFGDIISDECAMITGSMGMLPSASLNESKFGLYEPAGGSAPDIAGKNIANPVAQILSAALMLRYSLGEEAAAQDIENAVSQALAAGEL-TADLAG 342
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_BACSK (3-isopropylmalate dehydrogenase OS=Bacillus clausii (strain KSM-K16) GN=leuB PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.641e-31 Identity = 78/197 (39.59%), Postives = 123/197 (62.44%), Query Frame = -1 Query: 251 GVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 838 G V++L + TR R+ AF +A+T ++RV ++ KAN+++ + L+ + EVA +YP++T +++DN M L+++P FDV+V NL+GDI+SD + + G LGL PS ++ + L E VHGSAPDIAG ANP A +LS+ ML++ L D+A I+ A+ +A+G RT D+ +S + T AI Sbjct: 156 GAVDTL-LYTRGEIERIVHQAFQFARTR-KKRVVSVDKANVLESSR-LWREIADEVAREYPDVTLSHMLVDNAAMQLIRDPRQFDVIVTENLFGDILSDEASMITGSLGLLPSASMNTSKVGLFEPVHGSAPDIAGTGAANPLATILSAAMMLQYSFGLADEAKAIEVAVDRVLAQG-VRTKDIAKASENAVSTTAI 348
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_AQUAE (3-isopropylmalate dehydrogenase OS=Aquifex aeolicus GN=leuB PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.641e-31 Identity = 77/186 (41.40%), Postives = 114/186 (61.29%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKA-DRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 793 R+ F A+ R++++++ KAN+++ L+ + E E YP++ E + IDNC M LV+ P +FDV+V N++GDI+SD ++G LG+ PS +IG+ AL E VHGSAPDIAGK +ANP A +LS+ ML++ DKA D I+ AI T+ +G YRT D+ TK I D + Sbjct: 171 RIVRKGFEIARKR-RKKLTSVDKANVLE-VSALWRQIVEEEKENYPDVELEHLYIDNCAMQLVRRPTSFDVIVTGNIFGDILSDEAGVVVGSLGMLPSASIGD-RYALYEPVHGSAPDIAGKGIANPIATILSAAMMLKYSFNMDKAHDLIEKAIEETLNQG-YRTPDIYSEGCIKVGTKEITDKI 352
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_STRT2 (3-isopropylmalate dehydrogenase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=leuB PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 3.450e-31 Identity = 76/186 (40.86%), Postives = 120/186 (64.52%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 793 R+ AF A+ G+ +V++I K N++ T L+ K EV+ ++P++T E ++D+ M+++ NPA FDV+V NL+GDI+SD + L G LG+ PS + E G +L E +HGSAPDIAG+ +ANP +++LS MLR + A+ I+NA+ T+ +G T DLGG ++T++ T AI +L Sbjct: 163 RIMRRAFKIAQGRGK-KVTSIDKQNVLA-TSKLWRKVADEVSLEFPDVTLEHQLVDSAAMIMITNPARFDVVVTENLFGDILSDESSVLPGTLGVMPSASHSENGPSLYEPIHGSAPDIAGQGIANPISMILSVAMMLRESFNETEGAELIENAVDKTLNQG-ILTRDLGGQASTAEMTAAIISNL 345
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_STRT1 (3-isopropylmalate dehydrogenase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=leuB PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 3.450e-31 Identity = 76/186 (40.86%), Postives = 120/186 (64.52%), Query Frame = -1 Query: 239 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 793 R+ AF A+ G+ +V++I K N++ T L+ K EV+ ++P++T E ++D+ M+++ NPA FDV+V NL+GDI+SD + L G LG+ PS + E G +L E +HGSAPDIAG+ +ANP +++LS MLR + A+ I+NA+ T+ +G T DLGG ++T++ T AI +L Sbjct: 163 RIMRRAFKIAQGRGK-KVTSIDKQNVLA-TSKLWRKVADEVSLEFPDVTLEHQLVDSAAMIMITNPARFDVVVTENLFGDILSDESSVLPGTLGVMPSASHSENGPSLYEPIHGSAPDIAGQGIANPISMILSVAMMLRESFNETEGAELIENAVDKTLNQG-ILTRDLGGQASTAEMTAAIISNL 345
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_SHISS (3-isopropylmalate dehydrogenase OS=Shigella sonnei (strain Ss046) GN=leuB PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 3.450e-31 Identity = 77/179 (43.02%), Postives = 114/179 (63.69%), Query Frame = -1 Query: 266 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL--GGSSTTSD 793 R+A AF A+ R +V++I KAN++Q + L+ + E+A +YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E GSAPDIAGKN+ANP A +LS +LR+ L+ D A I+ AI + EG RT DL G ++ ++D Sbjct: 174 RIARIAFESARKR-RHKVTSIDKANVLQSSI-LWREIVNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEG-IRTGDLARGAAAVSTD 349
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_ECOLI (3-isopropylmalate dehydrogenase OS=Escherichia coli (strain K12) GN=leuB PE=1 SV=3) HSP 1 Score: 135.576 bits (340), Expect = 3.450e-31 Identity = 77/179 (43.02%), Postives = 114/179 (63.69%), Query Frame = -1 Query: 266 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL--GGSSTTSD 793 R+A AF A+ R +V++I KAN++Q + L+ + E+A +YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E GSAPDIAGKN+ANP A +LS +LR+ L+ D A I+ AI + EG RT DL G ++ ++D Sbjct: 174 RIARIAFESARKR-RHKVTSIDKANVLQSSI-LWREIVNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEG-IRTGDLARGAAAVSTD 349
BLAST of CN188826 vs. ExPASy Swiss-Prot
Match: LEU3_VIBVU (3-isopropylmalate dehydrogenase OS=Vibrio vulnificus GN=leuB PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.506e-31 Identity = 75/171 (43.86%), Postives = 110/171 (64.33%), Query Frame = -1 Query: 284 RVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGG 793 R+A+ AF A+ R++V +I KAN++Q + L+ + E+A+ YP++ + IDN M L+K+PA FDV++ N++GDIISD CA + G +G+ PS ++ E L E GSAPDIAGKN+ANP A +LS+ MLR+ L A I+NA+ +A G+ TADL G Sbjct: 175 RIAKIAFESARLR-RKKVCSIDKANVLQSSI-LWREVVEELAKDYPDVELSHMYIDNATMQLIKDPAQFDVMLCSNIFGDIISDECAMITGSMGMLPSASLNESKFGLYEPAGGSAPDIAGKNIANPVAQILSAALMLRYSLGEEAAAQDIENAVSQALAAGEL-TADLAG 342 The following BLAST results are available for this feature:
BLAST of CN188826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188826 ID=CN188826; Name=CN188826; organism=Citrus sinensis; type=EST; length=847bpback to top |