CN181982

Overview
NameCN181982
Unique NameCN181982
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length767
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181982 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.491e-32
Identity = 75/200 (37.50%), Postives = 122/200 (61.00%), Query Frame = -1
Query:  183 MPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNR--VVGTYGYMSPEYALGGLFSTKSDVFSFGVLLLEIITGKKNTGIFNDDSSNLIRYVWELWSD---DKALEIVDSSMADSCPAPEALRCIQVGLLCVQDRTTDRPSMSTVVFML 767
            MPN SL   + +   +Q + W+ R  + LG A+G+ YLH      +IHRD+K+SNILLDEE  PRI+DFG A++   + +  + +   V GT GY++PEYA     + KSDV+SFGV+L+E++TGKK       ++++++ +VW +  +   +  ++++D+S+ D     +AL+ + + LLC       RP M +VV ML
Sbjct:  765 MPNGSLWEQLHERRGEQEIGWRVRQALALGAAKGLEYLHHGLDRPVIHRDVKSSNILLDEEWRPRIADFGLAKIIQADSVQRDFSAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKPLETDFGENNDIVMWVWSVSKETNREMMMKLIDTSIEDEY-KEDALKVLTIALLCTDKSPQARPFMKSVVSML 963          
BLAST of CN181982 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.016e-31
Identity = 79/183 (43.17%), Postives = 107/183 (58.47%), Query Frame = -1
Query:  174 LDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFSFGVLLLEIITGKKN---TGIFNDDSSNLIRYVWELWSDDKALEIVDSSMADSCPAPEALRCIQVGLLCVQDRTTDRPSMSTVVFMLSNE 713
            LDW KR  I LG ARG+ YLH     +IIH D+KA+NILLDEE    + DFG A++    + S  T  V GT G+++PEY   G  S K+DVF +GV+LLE+ITG+K      + NDD   L+ +V E+  + K   +VD+ +       E  + IQ+ LLC Q    +RP MS VV ML  +
Sbjct:  371 LDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYND-SHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLEGD 552          
BLAST of CN181982 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.326e-31
Identity = 79/213 (37.09%), Postives = 124/213 (58.22%), Query Frame = -1
Query:  144 MPNKSLDYFIF--DESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFSFGVLLLEIITGKKNTGIFNDDSSNLIRYV-WELWSDDKALEIVDSSMADSCP--APEALRCIQVGLLCVQDRTTDRPSMSTVVFMLSNETSVPSPKQPT 767
            MPN SLD  +   D++     +W   + I +G+A+G+ YLH D    I+HRDLK SNILLD +   R++DFG A++   +E   + + V G+YGY++PEYA       KSD++S+GV+LLEIITGK++      + ++++ +V  +L + +   E++D SM  SC     E  + +++ LLC     TDRP M  V+ +L        PK+ T
Sbjct:  801 MPNGSLDDLLHGGDKTMTAAAEWTALYQIAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTDE---SMSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVEPEFGEGNSIVDWVRSKLKTKEDVEEVLDKSMGRSCSLIREEMKQMLRIALLCTSRSPTDRPPMRDVLLILQE----AKPKRKT 1006          
BLAST of CN181982 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.326e-31
Identity = 83/236 (35.17%), Postives = 132/236 (55.93%), Query Frame = -1
Query:   78 MPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFSFGVLLLEIITGKKNTGIFNDDSSNLIRYVWELWSDDKALEIVDSSMADSCPAPEALRCI-QVGLLCVQDRTTDRPSMSTVV-----FMLSNETSVPSPKQPTFSVRKIEIDTDYSSTGTKSSAN 767
            + N SL   +   ++K+ LDW  R  I  G A+G+ YLH D   RIIHRD+K+SNILLD+++  R++DFG A+     +  T+T  V+GT GY+ PEYA     + KSDV+S+G++LLE++T +K      DD SNL   +     +++ +E+ D  +  +C     ++ + Q+ LLC + +  DRP+M  V      FMLS +    +    T +     +D +Y++  T  S N
Sbjct:  724 LENGSLWDLLHGPTKKKTLDWDTRLKIAYGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIAKSLCVSKSHTST-YVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTRRKAV----DDESNLHHLIMSKTGNNEVMEMADPDITSTCKDLGVVKKVFQLALLCTKRQPNDRPTMHQVTRVLGSFMLSEQPPAATDTSATLA-GSCYVD-EYANLKTPHSVN 952          
BLAST of CN181982 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.263e-31
Identity = 82/202 (40.59%), Postives = 113/202 (55.94%), Query Frame = -1
Query:  192 MPNKSL-DYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFSFGVLLLEIITGKKNTGIFNDDSSNLIRYVWELWS-----DDKALEIVDSSMADSC----PAPEALRCIQVGLLCVQDRTTDRPSMSTVV 767
            MPN SL D        + +LDW  RF+I LGI+ G+ YLH D    IIHRD+K  NIL+D +M P I DFG AR+     +ST T  V GT GY++PE A   + S +SDV+S+GV+LLE++TGK+       +  N++ +V  + S     DD A  IVD  + D         +A++   + L C   R  +RPSM  VV
Sbjct:  871 MPNGSLHDVLHRGNQGEAVLDWSARFNIALGISHGLAYLHHDCHPPIIHRDIKPENILMDSDMEPHIGDFGLARILDDSTVSTAT--VTGTTGYIAPENAYKTVRSKESDVYSYGVVLLELVTGKRALDRSFPEDINIVSWVRSVLSSYEDEDDTAGPIVDPKLVDELLDTKLREQAIQVTDLALRCTDKRPENRPSMRDVV 1070          
BLAST of CN181982 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.955e-31
Identity = 77/182 (42.31%), Postives = 112/182 (61.54%), Query Frame = -1
Query:  174 LDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFSFGVLLLEIITGKKNTGIFND-DSSNLIRYVWELWSDDKALEIVDSSMADSCPAPEAL-RCIQVGLLCVQDRTTDRPSMSTVVFMLSNE 713
            L W+ R  II G A+ + YLH+    +++HRD+KASNIL+D+E N ++SDFG A++    E S  T RV+GT+GY++PEYA  GL + KSD++SFGVLLLE ITG+         +  NL+ ++  +    +A E+VD  + +  P+  AL R + V L CV      RP MS V  ML ++
Sbjct:  278 LTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGE-SHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPRL-EPRPSKSALKRALLVSLRCVDPEAEKRPRMSQVARMLESD 457          
BLAST of CN181982 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.955e-31
Identity = 79/183 (43.17%), Postives = 107/183 (58.47%), Query Frame = -1
Query:  174 LDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFSFGVLLLEIITGKKN---TGIFNDDSSNLIRYVWELWSDDKALEIVDSSMADSCPAPEALRCIQVGLLCVQDRTTDRPSMSTVVFMLSNE 713
            LDW KR  I LG ARG+ YLH     +IIHRD+KA+NILLDEE    + DFG A++   ++    T  V GT G+++PEY   G  S K+DVF +GV+LLE+ITG++      + NDD   L+ +V  L  + K   +VD  +  +    E  + IQV LLC Q    +RP MS VV ML  +
Sbjct:  385 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 566          
BLAST of CN181982 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.859e-31
Identity = 76/199 (38.19%), Postives = 117/199 (58.79%), Query Frame = -1
Query:  180 MPNKSLDYFIFD-ESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFSFGVLLLEIITGKKN-TGIFNDDSSNLIRYVWELWSD-DKALEIVDSSMADSCPAPEALRCIQVGLLCVQDRTTDRPSMSTVVFMLS 767
            MP  SL+  + D    K+ LDW  R  I  G A+G+ +LH  +   +I+RD K+SNILLDE  +P++SDFG A++    + S  + RV+GTYGY +PEYA+ G  + KSDV+SFGV+ LE+ITG+K           NL+ +   L++D  K +++ D  +    P     + + V  +C+Q++   RP ++ VV  LS
Sbjct:  163 MPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVVTALS 361          
BLAST of CN181982 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.041e-31
Identity = 75/197 (38.07%), Postives = 117/197 (59.39%), Query Frame = -1
Query:  183 MPNKSLDYFIFDESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFSFGVLLLEIITGKKNTGIFNDDSSNLIRYVWELWSDDKALEIVDSSMAD--SCPAPEALRCIQVGLLCVQDRTTDRPSMSTVVFML 767
            MPN SL   +  E R   LDW  R+ I+LG A+G+ YLH D    I+HRD+KA+NIL+  +  P I+DFG A++    +I   +N V G+YGY++PEY      + KSDV+S+GV++LE++TGK+       +  +L+ +V +   +  +LE++DS++       A E ++ +   LLCV     +RP+M  V  ML
Sbjct:  871 MPNGSLGSLLH-ERRGSSLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEGIHLVDWVRQ---NRGSLEVLDSTLRSRTEAEADEMMQVLGTALLCVNSSPDERPTMKDVAAML 1063          
BLAST of CN181982 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.583e-31
Identity = 85/219 (38.81%), Postives = 121/219 (55.25%), Query Frame = -1
Query:  147 MPNKSLDYFIFD--ESRKQLLDWKKRFDIILGIARGVLYLHQDSRLRIIHRDLKASNILLDEEMNPRISDFGTARVFGGEEISTNTNRVVGTYGYMSPEYALGGLFSTKSDVFSFGVLLLEIITGKKNTGIFNDDSSN---LIRYVWELWSDDKALEIVDSSMAD------SCPAPEALRCIQVGLLCVQDRTTDRPSMSTVVFMLSNETSVPS-PKQP 767
            M N +LD  +F   E+ K  L W +R  IIL +A+G+ YLH   +  I HRD+K +NILLD +M  R++DFG A+    E  S  T RV GT+GY++PEYAL G  + KSDV+SFGV++LEI+ G+K   +    S N   +  + W L    K  E ++ S+        S P     R +QVG+LC       RP++   + ML  +  VP  P +P
Sbjct:  375 MSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQ-SREGESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPNTFLITDWAWSLVKAGKTEEALEQSLLREEGSGLSNPKGIMERFLQVGILCAHVLVALRPTILDALKMLEGDIEVPPIPDRP 592          
The following BLAST results are available for this feature:
BLAST of CN181982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 381
Match NameE-valueIdentityDescription
IKU2_ARATH3.491e-3237.50Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
SERK5_ARATH1.016e-3143.17Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
Y5148_ARATH1.326e-3137.09Probable leucine-rich repeat receptor-like protein... [more]
ERECT_ARATH1.326e-3135.17LRR receptor-like serine/threonine-protein kinase ... [more]
PEPR2_ARATH2.263e-3140.59Leucine-rich repeat receptor-like protein kinase P... [more]
Y2296_ARATH2.955e-3142.31Probable receptor-like protein kinase At2g42960 OS... [more]
BAK1_ARATH2.955e-3143.17BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
PBS1_ARATH3.859e-3138.19Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
RCH2_ARATH5.041e-3138.07Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
Y1105_ARATH6.583e-3138.81Probable receptor-like protein kinase At1g11050 OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0001M07_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001M07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181982 ID=CN181982; Name=CN181982; organism=Citrus sinensis; type=EST; length=767bp
TTGATTCTAGAAGAAGTTGCAATACAATAGAATATCATGCAAACTCATCG
ACCAATAAATGTAGTTAGTGTCACCTCATTAGCAGAAGACTTTGTCCCAG
TACTAGAGTAGTCTGTGTCAATTTCTATTTTCCGCACCGAAAATGTAGGT
TGTTTTGGGGAAGGAACAGATGTTTCATTGCTTAACATAAAGACAACTGT
TGACATGCTTGGCCGGTCTGTTGTTCTGTCCTGCACACACAAGAGTCCTA
CTTGAATGCATCGCAAAGCTTCAGGAGCAGGGCATGAATCAGCCATAGAT
GAGTCAACTATCTCCAGGGCCTTGTCGTCACTCCAGAGTTCCCATACATA
TCTTATCAGATTTGAGGAATCATCATTAAAAATTCCAGTGTTCTTCTTGC
CAGTTATAATCTCCAATAATAGGACTCCAAAACTGAAGACATCTGATTTC
GTAGAGAATAGGCCACCCAGTGCATACTCTGGTGACATATAGCCATACGT
TCCAACCACCCTATTTGTATTTGTTGATATCTCCTCTCCTCCAAATACTC
TAGCTGTACCAAAATCTGAGATTCTAGGGTTCATCTCTTCATCTAGAAGA
ATATTACTAGCTTTCAAGTCTCGATGGATAATTCTTAACCTCGAATCTTG
ATGTAGATATAGGACCCCTCGAGCTATCCCTAAAATTATATCGAAGCGCT
TTTTCCAATCCAACAATTGCTTCCTTGATTCATCAAAAATAAAGTAGTCC
AAGCTTTTGTTAGGCAT
back to top