CN181971
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181971 vs. ExPASy Swiss-Prot
Match: Y1061_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At1g50610 OS=Arabidopsis thaliana GN=At1g50610 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.204e-11 Identity = 55/167 (32.93%), Postives = 86/167 (51.50%), Query Frame = -3 Query: 187 IDLHSNQITGSLS-----SIINNRTSSFLEALDVSGNHFSGEIPEFTEGLSLKVLNIGSNKITGHIPS-SISNLIELEMLDIQRNQIAGTIPTSLGLLSKLQWLDVSVNSLTGKIPTSLLGIRGLRHANFRANRLCGEIPQGRPYSIFPGSAYAHNLCLCGKPLPPC 669 + L +TG L+ + N RT SF+ N+F+G +P+ SLK L + +N+ +G IP+ + + L+ + + N GTIP+SL L L L ++ N G+IP+ + L+ A+F N L G IP+ ++ PGS +A N LC PL PC Sbjct: 93 LQLEGMGLTGKLNLDPLVPMKNLRTISFMN------NNFNGPMPQVKRFTSLKSLYLSNNRFSGEIPADAFLGMPLLKKILLANNAFRGTIPSSLASLPMLLELRLNGNQFQGQIPS--FQQKDLKLASFENNDLDGPIPESL-RNMDPGS-FAGNKGLCDAPLSPC 249
BLAST of CN181971 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.204e-11 Identity = 43/136 (31.62%), Postives = 71/136 (52.21%), Query Frame = -3 Query: 271 LASIDLHSNQITGSLSSIINNRTSSFLEALDVSGNHFSGEIPEFTEGLSLKVLNIGSNKITGHIPSSISNLIELEMLDIQRNQIAGTIPTSLGLLSKLQWLDVSVNSLTGKIPTSLLGIRGLRHANFRANRLCGEI 678 + I + ++GSL + N S L LDVS N+ +G +P + L L+ N G++P S+S + +L L++ RN + G + L KL+ +D+S N LTGK+P S + GL+ + + N+ G I Sbjct: 73 VTEIKVSGRGLSGSLGYQLGNLKS--LTYLDVSKNNLNGNLP-YQLPDKLTYLDGSENDFNGNVPYSVSLMNDLSYLNLGRNNLNGELSDMFQKLPKLETIDLSSNQLTGKLPQSFANLTGLKTLHLQENQFKGSI 205
BLAST of CN181971 vs. ExPASy Swiss-Prot
Match: Y5516_ARATH (Probable receptor kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.185e-11 Identity = 58/169 (34.32%), Postives = 81/169 (47.93%), Query Frame = -3 Query: 181 SSFLEALDVSGNHFSGEIPEFTEGL--SLKVLNIGSNKITGHIPSSISNLIELEMLDIQRNQIAGTIPT-SLGLLSK-LQWLDVSVNSLTGKIPTSL----------------------LGIRGLRHANFRANRLCGEIPQGRPYSIFPGSAYAHNLCLCGKPLPPCRG 609 +S + A+ + G G IP T G +LKVL++ SN + G +PS I +L LE L +Q N +G + T SL +SK L LD+S NSL+G IP+ L L + ++ N N L G IP+ S P ++ N LCG PL C G Sbjct: 72 TSRVVAVRLPGVGLYGSIPPATLGKLDALKVLSLRSNSLFGTLPSDILSLPSLEYLYLQHNNFSGELTTNSLPSISKQLVVLDLSYNSLSGNIPSGLRNLSQITVLYLQNNSFDGPIDSLDLPSVKVVNLSYNNLSGPIPEHLKKS--PEYSFIGNSLLCGPPLNACSG 238
BLAST of CN181971 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.185e-11 Identity = 40/137 (29.20%), Postives = 69/137 (50.36%), Query Frame = -3 Query: 268 LASIDLHSNQITGSLSSIINNRTSSFLEALDVSGNHFSGEIPEFTEGLSLKVLNIGSNKITGHIPSSISNLIELEMLDIQRNQIAGTIPTSLGLLSKLQWLDVSVNSLTGKIPTSLLGIRGLRHANFRANRLCGEIP 678 + +I L + G + N T L +D+ N SG IP + L++L + N+++G P + + L + ++ N G +P +LG L L+ L +S N++TG+IP SL ++ L + N L G+IP Sbjct: 90 VTNIQLRGFNLRGIIPPEFGNLTR--LTEIDLVLNFLSGTIPTTLSQIPLEILAVTGNRLSGPFPPQLGQITTLTDVIMESNLFTGQLPPNLGNLRSLKRLLISSNNITGRIPESLSNLKNLTNFRIDGNSLSGKIP 224 HSP 2 Score: 67.781 bits (164), Expect = 7.138e-11 Identity = 61/186 (32.80%), Postives = 83/186 (44.62%), Query Frame = -3 Query: 163 PDGLASIDLHSNQITGS-LSSIINNRTSSFLEALDV--SGNHFSGEIPEFTEGL-SLKVLNIGSNKITGHIPSSISNLIELEMLDIQRNQIAGTIPTSLGLLSKLQWLDVSVNSLTGKIPTSLLGIRGLRHANFRANRLCGEIPQGRPYSIFPGSAYAHNL-------CLCGKPLPPCRGKNQANL 687 P L+ I L +TG+ LS + DV N F+G++P L SLK L I SN ITG IP S+SNL L I N ++G IP +G ++L LD+ S+ G IP S+ ++ L R L G P S FP N+ CL +P+P G + L Sbjct: 129 PTTLSQIPLEILAVTGNRLSGPFPPQLGQITTLTDVIMESNLFTGQLPPNLGNLRSLKRLLISSNNITGRIPESLSNLKNLTNFRIDGNSLSGKIPDFIGNWTRLVRLDLQGTSMEGPIPASISNLKNL--TELRITDLRG------PTSPFPDLQNMTNMERLVLRNCLIREPIPEYIGTSMTML 306
BLAST of CN181971 vs. ExPASy Swiss-Prot
Match: Y2278_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g02780 OS=Arabidopsis thaliana GN=At2g02780 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.185e-11 Identity = 46/139 (33.09%), Postives = 72/139 (51.80%), Query Frame = -3 Query: 265 LASIDLHSNQITGSLSSIINNRTSSFLEALDVSGNHFSGEIPEFTEGL-SLKVLNIGSNKITGHIPSSISNLIELEMLDIQRNQIAGTIPTSLGLLSKLQWLDVSVNSLTGKIPTSLLGIRGLRHANFRANRLCGEIPQ 678 L ++ L S I+GSLS I + S LE+L++S N SG+IPE L +LK L + N G + + L L+ LD+ N++ +P+ L SKL + + NS KIP + + L+ + +N G IP+ Sbjct: 107 LKTLSLTSLGISGSLSPKIITKLSPSLESLNLSSNFISGKIPEEIVSLKNLKSLVLRDNMFWGFVSDDLRGLSNLQELDLGGNKLGPEVPS---LPSKLTTVSLKNNSFRSKIPEQIKKLNNLQSLDLSSNEFTGSIPE 242
BLAST of CN181971 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.185e-11 Identity = 37/111 (33.33%), Postives = 61/111 (54.95%), Query Frame = -3 Query: 268 LEALDVSGNHFSGEIPEFTEGLSLKVLNIGSNKITGHIPSSISNLIELEMLDIQRNQIAGTIPTSLGLLSKLQWLDVSVNSLTGKIPTSLLGIRGLRHANFRANRLCGEIP 600 L+ +D+S N+ +G IP L L + + N++TG IP N+ L L ++ NQ++G +P LG L +Q + +S N+ G+IP++ + LR N+L G IP Sbjct: 89 LQEIDLSRNYLNGSIPPEWGVLPLVNIWLLGNRLTGPIPKEFGNITTLTSLVLEANQLSGELPLELGNLPNIQQMILSSNNFNGEIPSTFAKLTTLRDFRVSDNQLSGTIP 199
BLAST of CN181971 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.185e-11 Identity = 45/160 (28.12%), Postives = 82/160 (51.25%), Query Frame = -3 Query: 268 NIKLSNNQLK-FDVSE-IRFPDGLASIDLHSNQITGSLSSIINNRTSSFLEALDVSGNHFSGEIPEFTEGLSLKVLNIGSNKITGHIPSSISNLIELEMLDIQRNQIAGTIPTSLGLLSKLQWLDVSVNSLTGKIPTSLLGIRGLRHANFRANRLCGEIP 741 ++++ NN K +++ E +R L + +S ++GSL + L L ++ N+ GE+P G ++ L + K+TG I + + N+ L+ + + N+ +G +P G L +L+ L + NS TG +P SLL + L+ N N L G +P Sbjct: 139 SVEIDNNPFKSWEIPESLRNASALQNFSANSANVSGSLPGFLGPDEFPGLSILHLAFNNLEGELPMSLAGSQVQSLWLNGQKLTGDI-TVLQNMTGLKEVWLHSNKFSGPLPDFSG-LKELESLSLRDNSFTGPVPASLLSLESLKVVNLTNNHLQGPVP 296
BLAST of CN181971 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.138e-11 Identity = 50/159 (31.45%), Postives = 80/159 (50.31%), Query Frame = -3 Query: 256 LSNNQLKFDVSEIRFPDGLASIDLHSNQITGSLSSIINNRTSSFLEALDVSGNHFSGEIPEFTEGLSLKVLNIGSNKITGHIPSSISNLIELEMLDIQRNQIAGTIPTSLGLLSKLQWLDVSVNSLTGKIPTSLLGIRGLRHANFRANRLCGEIPQGRP 732 +SNN L D+ + P L ++L +NQ TGS I+ L+ L+++ N +FT+ SL +L++ SN G +P++ S+L + + +Q NQ +GTI L L+ L+++ N TG IP SL GI + N + P G P Sbjct: 102 MSNNNLGGDLP-YQLPPNLERLNLANNQFTGSAQYSISMMAP--LKYLNLAHNQLKQLAIDFTKLTSLSILDLSSNAFIGSLPNTCSSLTSAKSIYLQNNQFSGTIDILATL--PLENLNIANNRFTGWIPDSLKGINLQKDGNLLNSGPAPPPPPGTP 255 The following BLAST results are available for this feature:
BLAST of CN181971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181971 ID=CN181971; Name=CN181971; organism=Citrus sinensis; type=EST; length=743bpback to top |