CN188821
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_SCHPO (Putative DNA helicase ino80 OS=Schizosaccharomyces pombe GN=ino80 PE=1 SV=4) HSP 1 Score: 85.1149 bits (209), Expect = 4.483e-16 Identity = 45/125 (36.00%), Postives = 72/125 (57.60%), Query Frame = -1 Query: 377 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 751 M+D + + ++ +R+DG + + R+ +VTE+Q + ++ +LS +AGG+G+ LTAA TVIF + W P QA DRAHRIGQ V VY + T+++ + + K E V+ G E Sbjct: 1457 MIDLMEEYLTFRQYKYLRLDGSSKISQRRDMVTEWQTRPELFVFLLSTRAGGLGINLTAADTVIFYDSDWNPSIDSQAMDRAHRIGQQKQVTVYRFITRGTIEERIVIRAKEKEEVQKVVISGGE 1581
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_EMENI (Putative DNA helicase ino80 OS=Emericella nidulans GN=ino80 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.855e-16 Identity = 45/123 (36.59%), Postives = 67/123 (54.47%), Query Frame = -1 Query: 383 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 751 M+D + + + R+DG T R+ V +FQ++ D+ +LS +AGG+G+ LTAA TVIF + W P QA DRAHR+GQ V VY L+ T+++ + K E V+ G Sbjct: 1349 MIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRSTIEERIRKRALQKEEVQRVVISG 1471
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: YFC1_SCHPO (Uncharacterized ATP-dependent helicase C25A8.01c OS=Schizosaccharomyces pombe GN=SPAC25A8.01c PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.646e-16 Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = -1 Query: 365 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 751 +LD + + + +R DG T RQ L+ +F + + +LS KAGG G+ L A+ VI ++S+ P D +QAEDRAHR+GQ V VY + DT+++ + + +K+ L L G+ ++E Sbjct: 789 VLDILQLVMKSLNLKFLRFDGSTQVDFRQDLIDQFYADESINVFLLSTKAGGFGINLACANMVILYDVSFNPFDDLQAEDRAHRVGQKKEVTVYKFVVKDTIEEHIQRLANAKIA-LDATLSGNAETVE 916
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_ASPCL (Putative DNA helicase ino80 OS=Aspergillus clavatus GN=ino80 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.646e-16 Identity = 45/123 (36.59%), Postives = 67/123 (54.47%), Query Frame = -1 Query: 383 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 751 M+D + + + R+DG T R+ V +FQ++ D+ +LS +AGG+G+ LTAA TVIF + W P QA DRAHR+GQ V VY L+ T+++ + K E V+ G Sbjct: 1447 MIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1569
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: FUN30_YEAST (Uncharacterized ATP-dependent helicase FUN30 OS=Saccharomyces cerevisiae GN=FUN30 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.646e-16 Identity = 45/135 (33.33%), Postives = 74/135 (54.81%), Query Frame = -1 Query: 347 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 751 +LD + + +R+DG T RQ L+ +F E D+ +LS KAGG G+ L A+ VI + S+ P D QA DRAHR+GQ VN+ L+ D++++ + + ++KL L + + S +V S++ Sbjct: 978 VLDILEMVLSTLDYKFLRLDGSTQVNDRQLLIDKFYEDKDIPIFILSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLA-LDSYISEDKKSQDVLESKV 1111
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_COCIM (Putative DNA helicase INO80 OS=Coccidioides immitis GN=INO80 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.304e-15 Identity = 44/123 (35.77%), Postives = 68/123 (55.28%), Query Frame = -1 Query: 383 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 751 M+D + + + R+DG T R+ V++FQ++ ++ +LS +AGG+G+ LTAA TVIF + W P QA DRAHR+GQ V VY L+ T+++ + K E V+ G Sbjct: 1408 MIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVSDFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1530
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: HEPF1_PLAF7 (Probable ATP-dependent helicase PF08_0048 OS=Plasmodium falciparum (isolate 3D7) GN=PF08_0048 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.703e-15 Identity = 52/169 (30.77%), Postives = 82/169 (48.52%), Query Frame = -1 Query: 275 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVW--DVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQK--------TLDSFLKRCNNVDDSE 751 MLD + IR+DG T RQ +VT+F + + S ++G +G+ LTAA+ VIF + W P QA DR HRIGQ V+V+ + TV++ +W + + KL+N+ + G+ N+ S + P K + F+ + NN DD + Sbjct: 1796 MLDILEIFLNHLNYSFIRLDGSTKVEQRQKIVTKFNNDKSIFIFISSTRSGSIGINLTAANVVIFYDTDWNPSIDKQAMDRCHRIGQTKDVHVFRFVCEYTVEENIWKKQLQKRKLDNI-CINMGNFNNSNTHSKITDTDPTHNKDWFTNVDTIKEVFINKKNNDDDDD 1963
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_NEOFI (Putative DNA helicase ino80 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ino80 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.225e-15 Identity = 44/123 (35.77%), Postives = 67/123 (54.47%), Query Frame = -1 Query: 383 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 751 M+D + + + R+DG T R+ V +FQ++ ++ +LS +AGG+G+ LTAA TVIF + W P QA DRAHR+GQ V VY L+ T+++ + K E V+ G Sbjct: 1446 MIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1568
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_ASPOR (Putative DNA helicase ino80 OS=Aspergillus oryzae GN=ino80 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.225e-15 Identity = 44/123 (35.77%), Postives = 67/123 (54.47%), Query Frame = -1 Query: 383 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 751 M+D + + + R+DG T R+ V +FQ++ ++ +LS +AGG+G+ LTAA TVIF + W P QA DRAHR+GQ V VY L+ T+++ + K E V+ G Sbjct: 1244 MIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1366
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_ASPFU (Putative DNA helicase ino80 OS=Aspergillus fumigatus GN=ino80 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.225e-15 Identity = 44/123 (35.77%), Postives = 67/123 (54.47%), Query Frame = -1 Query: 383 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 751 M+D + + + R+DG T R+ V +FQ++ ++ +LS +AGG+G+ LTAA TVIF + W P QA DRAHR+GQ V VY L+ T+++ + K E V+ G Sbjct: 1446 MIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1568 The following BLAST results are available for this feature:
BLAST of CN188821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188821 ID=CN188821; Name=CN188821; organism=Citrus sinensis; type=EST; length=757bpback to top |