CN188821
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_ASPTN (Putative DNA helicase ino80 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ino80 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.906e-15 Identity = 40/104 (38.46%), Postives = 61/104 (58.65%), Query Frame = -1 Query: 440 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 751 M+D + + + R+DG T R+ V +FQ++ ++ +LS +AGG+G+ LTAA TVIF + W P QA DRAHR+GQ V VY L+ T+++ Sbjct: 1427 MIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEE 1530
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_ASPNC (Putative DNA helicase ino80 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=ino80 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.906e-15 Identity = 40/104 (38.46%), Postives = 61/104 (58.65%), Query Frame = -1 Query: 440 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 751 M+D + + + R+DG T R+ V +FQ++ ++ +LS +AGG+G+ LTAA TVIF + W P QA DRAHR+GQ V VY L+ T+++ Sbjct: 1434 MIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEE 1537
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: STH1_YEAST (Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae GN=STH1 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.473e-15 Identity = 42/122 (34.43%), Postives = 68/122 (55.74%), Query Frame = -1 Query: 389 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD-DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 751 ++D + K + +R+DG T R ++ F D D +LS +AGG+GL L A TVI + W P +QA+DRAHRIGQ + V + L+ D+V++++ + KL+ G+V+ Sbjct: 819 VMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVI 940
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_GIBZE (Putative DNA helicase INO80 OS=Gibberella zeae GN=INO80 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.473e-15 Identity = 45/131 (34.35%), Postives = 69/131 (52.67%), Query Frame = -1 Query: 359 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 751 M+D + + + R+DG T R+ V +FQ + ++ +LS +AGG+G+ LT A TVIF + W P QA DRAHR+GQ V VY L+ T+++ + K E V+ G S++ S Sbjct: 1654 MIDMMEEYLTYRNYKYCRLDGSTKLEDRRDTVHDFQTRPEIFIFLLSTRAGGLGINLTTADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLITRGTIEERIRKRAMQKEEVQRVVIQGGGASVDFS 1784
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_CANAL (Putative DNA helicase INO80 OS=Candida albicans GN=INO80 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.473e-15 Identity = 43/115 (37.39%), Postives = 64/115 (55.65%), Query Frame = -1 Query: 407 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 751 M+ + K IR+DG T SR+ +V +Q ++ +LS +AGG+GL LT+A TVIF + W P QA DRAHRIGQ V V+ L+ +T++ + + + K E Sbjct: 1264 MMQIFEEYLAYKSYKYIRLDGSTTIESRREMVQAWQTNPEIFIFMLSTRAGGLGLNLTSADTVIFYDSDWNPTIDSQAMDRAHRIGQTKQVKVFRLVTRNTIEQKILERAKEKEE 1378
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_NEUCR (Putative DNA helicase ino-80 OS=Neurospora crassa GN=ino-80 PE=3 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 1.104e-14 Identity = 43/123 (34.96%), Postives = 66/123 (53.66%), Query Frame = -1 Query: 383 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 751 M+D + + + R+DG T R+ V +FQ + ++ +LS +AGG+G+ LT+A TVIF + W P QA DRAHR+GQ V VY L+ T+++ + K E V+ G Sbjct: 1726 MIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQTRPEIFIFLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLITRGTIEERIRKRAMQKEEVQRVVITG 1848
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: SSL1_CAEEL (Helicase ssl-1 OS=Caenorhabditis elegans GN=ssl-1 PE=2 SV=4) HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14 Identity = 40/104 (38.46%), Postives = 58/104 (55.77%), Query Frame = -1 Query: 440 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 751 MLD + R+DG T RQA++ F V +LS ++GGVG+ LT A TVIF + W P QA+DR HRIGQ +V++Y L++ T+++ Sbjct: 1216 MLDVLQTFLSHHGYQYFRLDGTTGVEQRQAMMERFNADPKVFCFILSTRSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRNVSIYRLISERTIEE 1319
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: SRCAP_HUMAN (Helicase SRCAP OS=Homo sapiens GN=SRCAP PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14 Identity = 40/104 (38.46%), Postives = 59/104 (56.73%), Query Frame = -1 Query: 440 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 751 MLD + + +R+DG T RQAL+ F + +LS ++GGVG+ LT A TV+F + W P QA+DR HRIGQ V++Y L++ TV++ Sbjct: 2071 MLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEE 2174
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: RAD5_USTMA (DNA repair protein RAD5 OS=Ustilago maydis GN=RAD5 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14 Identity = 48/139 (34.53%), Postives = 71/139 (51.08%), Query Frame = -1 Query: 347 LDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVL---SMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL--DGHENSLEVSSSQI 748 LD I + + + H +R+DG TP R LV EFQ VL S+KAGGVGL LTAA+ + + W QA DR HR GQ S V+V+ + D+++D + + + K + L D H + + +S + Sbjct: 1240 LDLIEPVLTRYRFHFLRLDGSTPQKVRDKLVLEFQSPSPTNHVVLFLISLKAGGVGLNLTAANKIWLLDFWWNSSIENQAIDRIHRFGQTSPVSVFRYIIKDSIEDRILLIQKRKDMLIKHALNTDNHPHGTKPNSEML 1378
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: CHD1L_HUMAN (Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens GN=CHD1L PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14 Identity = 46/123 (37.40%), Postives = 68/123 (55.28%), Query Frame = -1 Query: 383 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 751 MLD + + R+DG R + F ++ + +LS +AGGVG+ LTAA TVIF + + P + +QA RAHRIGQ SV V L+ DTV++IV+ SKL+ +++G Sbjct: 375 MLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 496 The following BLAST results are available for this feature:
BLAST of CN188821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188821 ID=CN188821; Name=CN188821; organism=Citrus sinensis; type=EST; length=757bpback to top |