CN188821
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_SCLS1 (Putative DNA helicase INO80 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=INO80 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.460e-14 Identity = 38/104 (36.54%), Postives = 61/104 (58.65%), Query Frame = -1 Query: 440 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 751 M+D + + + +R+DG T R+ V +FQ + ++ +LS +AGG+G+ LT+A TVIF + W P QA DRAHR+GQ V VY ++ T+++ Sbjct: 1450 MIDLMEEYLTYRNYKYLRLDGSTKLEDRRDTVHDFQTRPEIFIFLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRMITRGTIEE 1553
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: CHD1L_MOUSE (Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus GN=Chd1l PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.460e-14 Identity = 47/123 (38.21%), Postives = 67/123 (54.47%), Query Frame = -1 Query: 383 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 751 MLD + + R+DG R + F + + +LS +AGGVG+ LTAA TVIF + + P + +QA RAHRIGQ SV V L+ DTV++IV+ SKL+ V++G Sbjct: 369 MLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGNQP-IFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVIEG 490
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: CHD1L_DANRE (Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio GN=chd1l PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.460e-14 Identity = 50/128 (39.06%), Postives = 67/128 (52.34%), Query Frame = -1 Query: 368 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSL 751 MLD + + R+DG R + F KD V +LS KAGGVG+ LTAA TVIF + + P + +QA RAHRIGQ V V LL DT+++I++ SKL V++ SL Sbjct: 364 MLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFSTKD-VFIFLLSTKAGGVGMNLTAADTVIFVDGDFNPQNDLQAAARAHRIGQTRPVKVIRLLGRDTIEEIIYSRAVSKLRLTDTVIEEGRFSL 490
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: SWR1_USTMA (Helicase SWR1 OS=Ustilago maydis GN=SWR1 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.213e-14 Identity = 38/104 (36.54%), Postives = 57/104 (54.81%), Query Frame = -1 Query: 440 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 751 +LD + +R+DG T SRQAL +F + A +LS ++GG+G+ LT A TV+F +L W Q DRAHRIGQ V++Y + T+++ Sbjct: 1561 VLDILESFLNYHGYRYLRLDGATKVESRQALTEQFNRDARISAFILSTRSGGLGINLTGADTVLFYDLDWNAAIEAQCMDRAHRIGQTRDVHIYRFVTEHTIEE 1664
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: INO80_PHANO (Putative DNA helicase INO80 OS=Phaeosphaeria nodorum GN=INO80 PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.213e-14 Identity = 43/123 (34.96%), Postives = 65/123 (52.85%), Query Frame = -1 Query: 383 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 751 M+D + + + R+DG T R+ V +FQ + +LS +AGG+G+ LT+A TVIF + W P QA DRAHR+GQ V VY L+ + T+++ + K E V+ G Sbjct: 1427 MIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQSDPTIFVFLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITSGTIEERIRKRALQKEEVQRVVISG 1549
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: Y020_MYCPN (Uncharacterized ATP-dependent helicase MPN_020 OS=Mycoplasma pneumoniae GN=MPN_020 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.196e-14 Identity = 44/129 (34.11%), Postives = 68/129 (52.71%), Query Frame = -1 Query: 365 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 751 ++D F ++ + DG P SR +++ +F + + S+KAGGVG+ LTAA VI ++ W QA DRAHRIGQ +V VY ++A +T+++ V V K E + + L N E Sbjct: 890 VIDHFKDTFKEQGIEYFIFDGRKSPKSRHSIIEKFNNAKNPCVLLASLKAGGVGINLTAAEVVIHFDVWWNTAVENQATDRAHRIGQKKTVQVYRIIAKNTIEERVCQVQAEKQELVSKTLVEDVNFFE 1018
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: SWR1_SCHPO (Helicase swr1 OS=Schizosaccharomyces pombe GN=swr1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.196e-14 Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = -1 Query: 443 IRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 703 +R+DG T RQ L F D + +LS ++GG+G+ LT A TVIF + W P QA+DR+HRIGQ V++Y L++ TV+ Sbjct: 1035 LRLDGATKIEQRQILTERFNNDDKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPQLDAQAQDRSHRIGQTRDVHIYRLISEYTVE 1121
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: RHP16_SCHPO (ATP-dependent helicase rhp16 OS=Schizosaccharomyces pombe GN=rhp16 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.196e-14 Identity = 42/128 (32.81%), Postives = 66/128 (51.56%), Query Frame = -1 Query: 368 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSL 751 MLD IH K +C+++DGG P +R A + F ++ ++S+KAGGV L LT AS V + W QA DR HRIGQ + V L ++++ + ++ K + + +D E +L Sbjct: 720 MLDLIHWRLRKAGFNCVKLDGGMTPKARAATIEAFSNDINITIFLVSLKAGGVALNLTEASQVFMMDPWWNGAVQWQAMDRIHRIGQKRPIKVITLCIENSIESKIIELQEKKAQMIHATIDQDEKAL 847
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: CHD1L_BOVIN (Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus GN=CHD1L PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.196e-14 Identity = 46/123 (37.40%), Postives = 68/123 (55.28%), Query Frame = -1 Query: 383 MLDAIHKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 751 MLD + + R+DG R + F ++ + +LS +AGGVG+ LTAA TVIF + + P + +QA RAHRIGQ SV V L+ DTV++IV+ SKL+ +++G Sbjct: 377 MLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IFTFLLSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNTIIEG 498
BLAST of CN188821 vs. ExPASy Swiss-Prot
Match: YF2C_SCHPO (Uncharacterized ATP-dependent helicase C17A2.12 OS=Schizosaccharomyces pombe GN=SPAC17A2.12 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.157e-14 Identity = 46/122 (37.70%), Postives = 65/122 (53.28%), Query Frame = -1 Query: 371 HKLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENS 736 H L L+ H +R DG RQ + F DV ++S+KAG VGL LT A+ VI E + P QA DR HR+GQ V VY + DT+++ + V R K + + + LD +EN+ Sbjct: 759 HMLKLENIRH-VRYDGTMSANQRQKSLHSFNNDKDVLVMLVSLKAGSVGLNLTIANHVILQEPFYNPSIEDQAIDRVHRLGQQKPVTVYRFITKDTIEERIVSVQRKKRQLVKEALDSNENN 879 The following BLAST results are available for this feature:
BLAST of CN188821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188821 ID=CN188821; Name=CN188821; organism=Citrus sinensis; type=EST; length=757bpback to top |