CN181965

Overview
NameCN181965
Unique NameCN181965
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN181965 vs. ExPASy Swiss-Prot
Match: UFOG_SOLME (Anthocyanidin 3-O-glucosyltransferase OS=Solanum melongena GN=GT PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.626e-16
Identity = 53/149 (35.57%), Postives = 84/149 (56.38%), Query Frame = 1 
Query:  259 HIAVLNFPFSTHASSVLSIIKRLAVSAPTA-LFTFFSTPQSNKALFSTGQQRHLPSNVKPYDVSDGVPEGHVFSGKRQEDIELFMNAADANFRKAVEAAVAETGRPLTCLVTDAFIWFAAEMARDWNNVPWIPCSPAGPNSLSAHLYTE 702
            HIA L FPF THA+ +L+++++++   P++ +F+FF+T  SN ++FS    +    N+K Y+V DGV EG+  +    E I+LF+ +      K  E A  ETG   +C+ +DAF+W          N P +     G  SL+ HLYT+
Sbjct:    7 HIAFLAFPFGTHATPLLTLVQKISPFLPSSTIFSFFNTSSSNSSIFSKVPNQ---ENIKIYNVWDGVKEGN-DTPFGLEAIKLFIQST-LLISKITEEAEEETGVKFSCIFSDAFLWCFLVKLPKKMNAPGVAYWTGGSCSLAVHLYTD 150
The following BLAST results are available for this feature:
BLAST of CN181965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
UFOG_SOLME4.626e-1635.57Anthocyanidin 3-O-glucosyltransferase OS=Solanum m... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001L21_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001L21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181965 ID=CN181965; Name=CN181965; organism=Citrus sinensis; type=EST; length=774bp
TTTTTTTTTTTTTTTAATGGACAAGTTAAATTCTAACTGCATAAGGACCG
TCACTTGATGCCTTTTAAAAAATTCTAGTTCTAGAAGACGTGAAAGCCAG
ACCTACAACCCCTAGGTGGTTGCAATACTGCGTAGATAATTATGACATTT
ATTTTTTCAACTATAAAATAAAGATGGGGGAGCAGCCAGCCAGAGCCAGA
GCCCAGAAGCAGCAACAGATTAACAACGATGGCTCAAACGCAGTCTCAGC
CCCGACCTCACATAGCTGTGCTGAATTTCCCCTTCTCAACACACGCCTCG
TCCGTTCTTTCAATCATCAAACGCCTCGCCGTCTCGGCACCAACTGCACT
GTTCACATTCTTCAGCACTCCGCAATCCAACAAGGCCCTTTTCTCCACTG
GCCAACAGCGTCATCTTCCCAGCAATGTAAAGCCTTACGACGTATCCGAT
GGAGTCCCGGAAGGCCACGTGTTCTCCGGGAAGCGTCAGGAAGATATCGA
GCTGTTCATGAATGCTGCTGATGCCAACTTCAGGAAAGCAGTTGAGGCAG
CAGTGGCCGAAACTGGCAGGCCCTTGACTTGTTTGGTAACAGATGCTTTC
ATTTGGTTTGCTGCAGAGATGGCTCGAGATTGGAATAATGTCCCTTGGAT
TCCATGCTCGCCCGCTGGCCCCAACTCTCTTTCTGCTCATCTTTACACTG
AAGGAGTTGTTTCCGGAGACTTGGATTCAGTCTTTTCTGTTATGGTGCAT
CAAATGGGACGTCAGCTACCCAAG
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