CN181961
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181961 vs. ExPASy Swiss-Prot
Match: RS3_BOVIN (40S ribosomal protein S3 OS=Bos taurus GN=RPS3 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.774e-31 Identity = 66/91 (72.53%), Postives = 71/91 (78.02%), Query Frame = -3 Query: 290 IMESGAKGCEVIFRGKLGAQRAKSMKFKEGYMVFSGQPGNEYIDFAVRHVFLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 562 IMESGAKGCEV+ GKL QRAKSMKF +G M+ SG P N Y+D AVRHV LRQGVLGIKVKIML WDP GK GP PLPD V+I PKDE Sbjct: 126 IMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CN181961 vs. ExPASy Swiss-Prot
Match: RS3_AMBME (40S ribosomal protein S3 OS=Ambystoma mexicanum GN=RPS3 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.774e-31 Identity = 65/91 (71.43%), Postives = 73/91 (80.22%), Query Frame = -3 Query: 290 IMESGAKGCEVIFRGKLGAQRAKSMKFKEGYMVFSGQPGNEYIDFAVRHVFLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 562 IMESG+KGCEV+ GKL QRAKSMKF +G M+ SG P N Y+D AVRHV LRQGVLGIKVKIML+WDP+GK GP PLPD V+I PKDE Sbjct: 126 IMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLAWDPSGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CN181961 vs. ExPASy Swiss-Prot
Match: RS3_ICTPU (40S ribosomal protein S3 OS=Ictalurus punctatus GN=rps3 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 6.235e-31 Identity = 70/120 (58.33%), Postives = 81/120 (67.50%), Query Frame = -3 Query: 230 IMESGAKGCEVIFRGKLGAQRAKSMKFKEGYMVFSGQPGNEYIDFAVRHVFLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD---------EEEYVKPTLVATDIGVPIQGA 562 IMESGAKGCEV+ GKL QRAKSMKF +G M+ SG P N Y+D AVRHV LRQGVLGIKVKIML WDP+GK GP PLPD V+I PK+ E++ KP + G P+ A Sbjct: 126 IMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEILPTTPVSEQKGAKPEVPVMPQGAPVPTA 245
BLAST of CN181961 vs. ExPASy Swiss-Prot
Match: RS3_MANSE (40S ribosomal protein S3 OS=Manduca sexta GN=RpS3 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.536e-29 Identity = 61/98 (62.24%), Postives = 72/98 (73.47%), Query Frame = -3 Query: 269 IMESGAKGCEVIFRGKLGAQRAKSMKFKEGYMVFSGQPGNEYIDFAVRHVFLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 562 IMESGA+GCEV+ GKL QRAKSMKF +G M+ SG P N+Y++ A RHV LRQGVLGIKVKIML WD GK GP P PD + + PKDE ++PT Sbjct: 127 IMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPAPLEPT 224
BLAST of CN181961 vs. ExPASy Swiss-Prot
Match: RS3_DROME (40S ribosomal protein S3 OS=Drosophila melanogaster GN=RpS3 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.421e-29 Identity = 61/97 (62.89%), Postives = 73/97 (75.26%), Query Frame = -3 Query: 272 IMESGAKGCEVIFRGKLGAQRAKSMKFKEGYMVFSGQPGNEYIDFAVRHVFLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 562 IMESGAKGCEV+ GKL QRAKSMKF +G M+ SG P N+Y++ A RHV LRQGVLGIKVK+ML +DP K GP PLPD V++ PK+E+ Y P Sbjct: 128 IMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETP 224
BLAST of CN181961 vs. ExPASy Swiss-Prot
Match: RS3_SCHPO (40S ribosomal protein S3 OS=Schizosaccharomyces pombe GN=rps3 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.030e-25 Identity = 61/111 (54.95%), Postives = 75/111 (67.57%), Query Frame = -3 Query: 230 IMESGAKGCEVIFRGKLGAQRAKSMKFKEGYMVFSGQPGNEYIDFAVRHVFLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIGVPIQGA 562 +ME+GAKGCEV+ GKL A RAKSMKF +G+M+ SGQP ++ID A RHV LRQGVLG+KVKIML P K LPD+V + PK+EE KP V I P++ A Sbjct: 128 VMEAGAKGCEVVISGKLRAARAKSMKFADGFMIHSGQPAVDFIDSATRHVLLRQGVLGVKVKIML---PEPKTRQKKSLPDIVVVLDPKEEEPITKPYTV---INQPVEAA 232
BLAST of CN181961 vs. ExPASy Swiss-Prot
Match: RS3_CAEEL (40S ribosomal protein S3 OS=Caenorhabditis elegans GN=rps-3 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.997e-25 Identity = 58/91 (63.74%), Postives = 68/91 (74.73%), Query Frame = -3 Query: 290 IMESGAKGCEVIFRGKLGAQRAKSMKFKEGYMVFSGQPGNEYIDFAVRHVFLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 562 IMESGA+G EVI GKL QRAK+MKF +G M+ SG P N+YI AVRHV LRQGV+GIKVKIML +DP G+ GP LPD V I P++E Sbjct: 128 IMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKVKIMLPYDPRGQNGPRNALPDHVQIVEPQEE 218
BLAST of CN181961 vs. ExPASy Swiss-Prot
Match: RS3_YEAST (40S ribosomal protein S3 OS=Saccharomyces cerevisiae GN=RPS3 PE=1 SV=5) HSP 1 Score: 112.849 bits (281), Expect = 1.139e-24 Identity = 57/99 (57.58%), Postives = 72/99 (72.73%), Query Frame = -3 Query: 266 IMESGAKGCEVIFRGKLGAQRAKSMKFKEGYMVFSGQPGNEYIDFAVRHVFLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 562 +MESGAKGCEV+ GKL A RAK+MKF +G+++ SGQP N++ID A RHV +RQGVLGIKVKIM DP + LPD VTI PK+EE + P++ Sbjct: 126 VMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIKVKIMR--DPAKSRTGPKALPDAVTIIEPKEEEPILAPSV 222
BLAST of CN181961 vs. ExPASy Swiss-Prot
Match: RS3_DICDI (40S ribosomal protein S3 OS=Dictyostelium discoideum GN=rps3 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.102e-22 Identity = 54/87 (62.07%), Postives = 62/87 (71.26%), Query Frame = -3 Query: 308 IMESGAKGCEVIFRGKLGAQRAKSMKFKEGYMVFSGQPGNEYIDFAVRHVFLRQGVLGIKVKIMLSWDPNGK--QGPTTPLPDLVTI 562 IM GAKGCEVI GKL AQRAKSMKF++GYM+ SGQP ++IDFA RHV LRQG LG+KV IML +D K P PD+V I Sbjct: 129 IMTRGAKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSKDFIDFACRHVLLRQGTLGVKVAIMLPYDETRKIHGACNIPQPDVVVI 215
BLAST of CN181961 vs. ExPASy Swiss-Prot
Match: RS3_ENCCU (40S ribosomal protein S3 OS=Encephalitozoon cuniculi GN=RPS3 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.004e-17 Identity = 41/85 (48.24%), Postives = 58/85 (68.24%), Query Frame = -3 Query: 293 AKGCEVIFRGKLGAQRAKSMKFKEGYMVFSGQPGNEYIDFAVRHVFLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 547 A+GC++I GKL QRAKS+KF++G ++ SG +YI+ V +QGV+GI+V+IML +DP G GP PLPD +TI P + Sbjct: 142 AQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQGVIGIQVRIMLPYDPEGVLGPNYPLPDRITILEPSE 226 The following BLAST results are available for this feature:
BLAST of CN181961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181961 ID=CN181961; Name=CN181961; organism=Citrus sinensis; type=EST; length=564bpback to top |