CN188813

Overview
NameCN188813
Unique NameCN188813
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1723..2425. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALDOC_MOUSE (Fructose-bisphosphate aldolase C OS=Mus musculus GN=Aldoc PE=1 SV=4)

HSP 1 Score: 136.732 bits (343), Expect = 1.143e-31
Identity = 71/136 (52.21%), Postives = 92/136 (67.65%), Query Frame = -3
Query:  298 LKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPG   P K +P+ IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G    G  AA+SL++ ++ Y
Sbjct:  229 LKPNMVTPGHACPIKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEMNGLAAQGRYEGSGD-GGAAAQSLYIANHAY 363          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 136.732 bits (343), Expect = 1.143e-31
Identity = 74/136 (54.41%), Postives = 84/136 (61.76%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVT G   PK  TP  +A  TV  L RT+PAAVP + FLSGGQSEEEA+ NLNAMNQ    KPW L+FS+GRALQ S L AW GK EN + AQ  F  R + NS A  G Y    +    A +SL    Y Y
Sbjct:  229 LKPNMVTAGHSCPKKYTPQDVAVATVTTLLRTVPAAVPGICFLSGGQSEEEASLNLNAMNQSPLPKPWKLTFSYGRALQASALAAWLGKSENKKAAQEAFCKRAQINSLACRGQYVTSGKTDTAATQSLFTASYTY 364          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALF_PLAFA (Fructose-bisphosphate aldolase OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.950e-31
Identity = 78/136 (57.35%), Postives = 92/136 (67.65%), Query Frame = -3
Query:  298 LKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVT G E   K T   +   TVR L+RT+P A+P VVFLSGGQSEEEA+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  GE A  SL+ K Y Y
Sbjct:  236 LKPNMVTAGYECTAKTTTQDVGFLTVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALGPH-PWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAG-GENAGASLYEKKYVY 369          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALF_PLAF7 (Fructose-bisphosphate aldolase OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0425 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.950e-31
Identity = 78/136 (57.35%), Postives = 92/136 (67.65%), Query Frame = -3
Query:  298 LKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVT G E   K T   +   TVR L+RT+P A+P VVFLSGGQSEEEA+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  GE A  SL+ K Y Y
Sbjct:  236 LKPNMVTAGYECTAKTTTQDVGFLTVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALGPH-PWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAG-GENAGASLYEKKYVY 369          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALDOB_BOVIN (Fructose-bisphosphate aldolase B OS=Bos taurus GN=ALDOB PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.326e-31
Identity = 72/136 (52.94%), Postives = 84/136 (61.76%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVT G    K  TP+ +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q  F+ R  ANS+A  G Y      G  + +SL    Y Y
Sbjct:  229 LKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKTTQEAFMKRALANSQAAKGQYVHMGSSGSASTQSLFTASYTY 364          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.673e-31
Identity = 70/136 (51.47%), Postives = 92/136 (67.65%), Query Frame = -3
Query:  298 LKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKP+MVTPG+E   K +P+ +A+ T+  L+R +P AVP ++FLSGGQSE EAT NLNAMNQ  +  PW +SFS+ RALQ S L+ W GK E ++ +Q   LVR KANS A LG Y  + +  E A + + VK Y Y
Sbjct:  259 LKPSMVTPGAEHKNKASPETVADFTLTMLKRRVPPAVPGIMFLSGGQSEAEATLNLNAMNQ--SPNPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGE-NEDAKKGMFVKGYTY 391          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALF2_LAMJA (Fructose-bisphosphate aldolase, non-muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.677e-31
Identity = 69/136 (50.74%), Postives = 90/136 (66.18%), Query Frame = -3
Query:  298 LKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVT G  +  + +P  +A  TV AL+RT+P+AVP + FLSGGQSEE+A+ NLNA+NQL  ++PW+LSFS+GRALQ S LKAWAG   N+  A+  F  R   N  A  G Y      G  A+ESL + ++ Y
Sbjct:  229 LKPNMVTAGQASKIRCSPQEVAMATVTALRRTVPSAVPGITFLSGGQSEEDASLNLNAINQLPLERPWALSFSYGRALQASVLKAWAGAPANIPAAKKEFEKRAAINGLAAQGKYVPAGSSGSAASESLFIANHNY 364          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALDOB_MOUSE (Fructose-bisphosphate aldolase B OS=Mus musculus GN=Aldob PE=1 SV=3)

HSP 1 Score: 132.88 bits (333), Expect = 1.651e-30
Identity = 70/136 (51.47%), Postives = 83/136 (61.03%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVT G    K  TP+ +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N+    +PW LSFS+GRALQ S L AW GK  N +  Q  F+ R  AN +A  G Y      G  A +SL    Y Y
Sbjct:  229 LKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAMANCQAAQGQYVHTGSSGAAATQSLFTASYTY 364          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALDOB_SHEEP (Fructose-bisphosphate aldolase B OS=Ovis aries GN=ALDOB PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.156e-30
Identity = 71/136 (52.21%), Postives = 83/136 (61.03%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVT G    K  TP+ +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q  F+ R  ANS+A  G Y         + +SL    Y Y
Sbjct:  229 LKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRALANSQAAKGQYVHMGSSDSASTQSLFTASYTY 364          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALDOB_RABIT (Fructose-bisphosphate aldolase B OS=Oryctolagus cuniculus GN=ALDOB PE=1 SV=3)

HSP 1 Score: 132.109 bits (331), Expect = 2.816e-30
Identity = 70/136 (51.47%), Postives = 82/136 (60.29%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVT G    K  TP+ +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q  F+ R   N +A  G Y      G  + +SL    Y Y
Sbjct:  229 LKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRAVVNCQAAKGQYVHTGSSGAASTQSLFTASYTY 364          
The following BLAST results are available for this feature:
BLAST of CN188813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOC_MOUSE1.143e-3152.21Fructose-bisphosphate aldolase C OS=Mus musculus G... [more]
ALDOB_CHICK1.143e-3154.41Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]
ALF_PLAFA1.950e-3157.35Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALF_PLAF71.950e-3157.35Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALDOB_BOVIN3.326e-3152.94Fructose-bisphosphate aldolase B OS=Bos taurus GN=... [more]
ALFC3_ARATH5.673e-3151.47Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALF2_LAMJA9.677e-3150.74Fructose-bisphosphate aldolase, non-muscle type OS... [more]
ALDOB_MOUSE1.651e-3051.47Fructose-bisphosphate aldolase B OS=Mus musculus G... [more]
ALDOB_SHEEP2.156e-3052.21Fructose-bisphosphate aldolase B OS=Ovis aries GN=... [more]
ALDOB_RABIT2.816e-3051.47Fructose-bisphosphate aldolase B OS=Oryctolagus cu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006M23_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188813 ID=CN188813; Name=CN188813; organism=Citrus sinensis; type=EST; length=704bp
TTTTTTTTTTTTTTTTTAGCACAAGAAAACATTATCAACTTTTTGACAAA
ATCACAGAAATTTAGTGCCATTAGGGGAACGGAAAAAAAAAGAAAAACAA
AAACAAAAGCATAAACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCAA
ACCGAAGTTCCCAAGCTTTTTATTGCTCCACCTAAATATGAAAGGGCTCT
AAAACTATGAATGAGAATGGGCCAACCTAATGTTCATACCGCCATTTACT
CTCATAAAGTTCATAAAGCACAACACCCAAAGCTTCAACTGTGCTTAGTA
TTTGTAGTCCTTGACATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGG
CATCACCCTTGTAAGTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTG
ACAAGGAAGGGGGCCTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCA
TGCCTTGAGAGTGCTCTGCTGAAGTGCACGTCCAAAGGAGAAGGAAAGTG
ACCATGGCTTCTTCGTCTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTA
GCCTCCTCCTCACTCTGCCCACCAGACAAGAACACAACAGCAGGAACTGC
TGCAGGCATAGTGCGTTGCAGGGCCCGGACAGTGTGTTCAGCAATCACGT
CCGGTGTAACTTTGGGAGCTTCAGATCCAGGGGTCACCATGTTGGGCTTC
AAAA
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