CN188813

Overview
NameCN188813
Unique NameCN188813
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1723..2425. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.272e-30
Identity = 73/138 (52.90%), Postives = 91/138 (65.94%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPKV-TPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGD--AQLGEGAAESLHVKDYKY 702
            LKPNMVT G    K  TP   A  TVRALQRT+P AVP + FLSGGQSE +AT+NLN +N++   KPW+L+FSFGRALQ S L  W GK+ENV  AQ   L   KAN  A +G ++G+    LG+   +SL V ++ Y
Sbjct:  229 LKPNMVTAGQACKKAYTPQENALATVRALQRTVPPAVPGITFLSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEGNMGTTLGD---KSLFVANHAY 363          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALDOB_HUMAN (Fructose-bisphosphate aldolase B OS=Homo sapiens GN=ALDOB PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 6.272e-30
Identity = 70/136 (51.47%), Postives = 82/136 (60.29%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVT G    K  TP+ +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK  N +  Q  F+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  229 LKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAMANCQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALDOB_PONAB (Fructose-bisphosphate aldolase B OS=Pongo abelii GN=ALDOB PE=2 SV=3)

HSP 1 Score: 130.568 bits (327), Expect = 8.192e-30
Identity = 70/136 (51.47%), Postives = 82/136 (60.29%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVT G    K  TP+ +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK  N +  Q  F+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  229 LKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAVANHQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.070e-29
Identity = 75/136 (55.15%), Postives = 91/136 (66.91%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPKVTP-DVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVT G +  + T  D I   TVR L+RT+P A+P V FLSGGQSEE+A+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  G  A  SL+ K Y Y
Sbjct:  225 LKPNMVTAGYDCTEKTKTDDIGFFTVRTLRRTVPPALPGVAFLSGGQSEEDASINLNSINVLGPH-PWALTFSYGRALQASVLNTWQGKKENVAKARRVLLQRAEANSLATYGKYKGGAG-GSTAGASLYEKKYVY 358          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.397e-29
Identity = 68/123 (55.28%), Postives = 85/123 (69.11%), Query Frame = -3
Query:  337 LKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGE 702
            LKP+MVTPG+E+  K +P  +AE+T+  L R +P AVP ++FLSGGQSE EAT NLNAMN  K+  PW +SFS+ RALQ + LK W G  ENV+ AQ   L R K+NS A LG Y GD +  E
Sbjct:  218 LKPSMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--KSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEE 338          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALDOB_RAT (Fructose-bisphosphate aldolase B OS=Rattus norvegicus GN=Aldob PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 6.935e-29
Identity = 67/136 (49.26%), Postives = 83/136 (61.03%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNM+T G    K  TP+ +A  TV AL RT+PAAVP++ FLSGG SEE+AT NLNA+ +    +PW LSFS+GRALQ S L AW GK  N +  Q  F+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  229 LKPNMLTAGHACTKKYTPEQVAMATVTALHRTVPAAVPSICFLSGGMSEEDATLNLNAIYRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAVANCQAAQGQYVHTGSSGAASTQSLFTASYTY 364          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.442e-28
Identity = 71/136 (52.21%), Postives = 86/136 (63.24%), Query Frame = -3
Query:  298 LKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVT G   P K +   IA  TV AL+RT+P AV  V FLSGGQSEEEA+ NLNA+N     KPW+L+FS+GRALQ S L AW G +EN + A   FL R +AN  A  G Y      G  A +SL+V ++ Y
Sbjct:  229 LKPNMVTAGHSCPTKFSNQEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKYVSSGMDG-SAGQSLYVANHAY 363          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.708e-27
Identity = 68/136 (50.00%), Postives = 85/136 (62.50%), Query Frame = -3
Query:  298 LKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVT G   P K + + IA  TV AL+RT+P AV  V FLSGGQSEEEA+ NLN++N     KPW L+FS+GRALQ S L AW G + N + A   F+ R +AN  A  G Y      G  A +SL+V ++ Y
Sbjct:  229 LKPNMVTAGHSCPTKYSSEEIAMATVTALRRTVPPAVSGVTFLSGGQSEEEASVNLNSINNCPLAKPWPLTFSYGRALQASALSAWRGAKSNEKAATEEFIKRAEANGLAAQGKYVSSGTCG-AAGQSLYVANHAY 363          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.708e-27
Identity = 67/136 (49.26%), Postives = 84/136 (61.76%), Query Frame = -3
Query:  298 LKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPG   P K + + +A  TV AL+RT+P AV  V FLSGGQSEEEA+ NL+A+N  +  KPW+L+FSFGRALQ S LK W G+ EN   A   F+ R + NS A+ G Y            S ++  Y Y
Sbjct:  229 LKPNMVTPGHGCPTKYSAEEVAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQRENEAAATEEFIKRAEINSLASQGKYTVCGDSSGATGLSHYLSSYAY 364          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.221e-26
Identity = 60/91 (65.93%), Postives = 69/91 (75.82%), Query Frame = -3
Query:  433 LKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEE 702
            LKPNMVT G   PK  TP+ IA  TV AL RT+PAAV  + FLSGGQSEE+AT NLNA+NQ   +KPW L+FS+GRALQ S LKAW GK+E
Sbjct:   10 LKPNMVTAGQGCPKKYTPEDIARATVTALNRTVPAAVAGITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
The following BLAST results are available for this feature:
BLAST of CN188813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF_SCHMA6.272e-3052.90Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]
ALDOB_HUMAN6.272e-3051.47Fructose-bisphosphate aldolase B OS=Homo sapiens G... [more]
ALDOB_PONAB8.192e-3051.47Fructose-bisphosphate aldolase B OS=Pongo abelii G... [more]
ALF2_PLABA1.070e-2955.15Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALFC2_PEA1.397e-2955.28Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALDOB_RAT6.935e-2949.26Fructose-bisphosphate aldolase B OS=Rattus norvegi... [more]
ALDOC_CARAU3.442e-2852.21Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALDCB_DANRE1.708e-2750.00Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALDCA_DANRE1.708e-2749.26Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALF_LYMST3.221e-2665.93Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006M23_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188813 ID=CN188813; Name=CN188813; organism=Citrus sinensis; type=EST; length=704bp
TTTTTTTTTTTTTTTTTAGCACAAGAAAACATTATCAACTTTTTGACAAA
ATCACAGAAATTTAGTGCCATTAGGGGAACGGAAAAAAAAAGAAAAACAA
AAACAAAAGCATAAACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCAA
ACCGAAGTTCCCAAGCTTTTTATTGCTCCACCTAAATATGAAAGGGCTCT
AAAACTATGAATGAGAATGGGCCAACCTAATGTTCATACCGCCATTTACT
CTCATAAAGTTCATAAAGCACAACACCCAAAGCTTCAACTGTGCTTAGTA
TTTGTAGTCCTTGACATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGG
CATCACCCTTGTAAGTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTG
ACAAGGAAGGGGGCCTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCA
TGCCTTGAGAGTGCTCTGCTGAAGTGCACGTCCAAAGGAGAAGGAAAGTG
ACCATGGCTTCTTCGTCTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTA
GCCTCCTCCTCACTCTGCCCACCAGACAAGAACACAACAGCAGGAACTGC
TGCAGGCATAGTGCGTTGCAGGGCCCGGACAGTGTGTTCAGCAATCACGT
CCGGTGTAACTTTGGGAGCTTCAGATCCAGGGGTCACCATGTTGGGCTTC
AAAA
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