CN188813

Overview
NameCN188813
Unique NameCN188813
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24
Identity = 58/115 (50.43%), Postives = 74/115 (64.35%), Query Frame = -3
Query:  361 LKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTY 702
            LKPNMV PG+E+  K   + +AE+TV+ L R +P A+P V FLSGG SE  A+  LNAMN     +PW L+FS+ RALQ S +K W GKE  V+  +  F+ R K NS A LG Y
Sbjct:  239 LKPNMVVPGAESGLKGHAEQVAEYTVKTLARVIPPALPGVTFLSGGLSEVMASEYLNAMNNCPLPRPWKLTFSYARALQSSAIKRWGGKESGVEAGRRAFMHRAKMNSLAQLGKY 353          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFA (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa GN=XF_0826 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.401e-21
Identity = 57/118 (48.31%), Postives = 78/118 (66.10%), Query Frame = -3
Query:  355 LKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAPFLVRCKANSEATLGTYKG 702
            LK +MV PG++  +  + D +AE TV  L+ T+PA +P +VFLSGGQ++ ++T +LNAMNQL    PW LSFS+GRA+QQ+ LK W+   + N  KAQ     R K N  A LG +KG
Sbjct:  218 LKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQL-DPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.075e-21
Identity = 56/118 (47.46%), Postives = 77/118 (65.25%), Query Frame = -3
Query:  355 LKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAPFLVRCKANSEATLGTYKG 702
            LK +MV PG++  +  + D +AE TV  L+ T+PA +P +VFLSGGQ++ ++T +LNAMNQ     PW LSFS+GRA+QQ+ LK W+   + N  KAQ     R K N  A LG +KG
Sbjct:  218 LKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQF-DPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 2.641e-20
Identity = 57/123 (46.34%), Postives = 76/123 (61.79%), Query Frame = -3
Query:  337 LKPNMVTPGS-EAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGE 702
            LKP+MV PG+  A K  P+ +A++ ++ L R     VP ++ LSGGQSE EAT NLNAMNQ  +  PW +SFS+ RALQ + LK W   +ENV   +A      K+NS A LG Y G+ +  E
Sbjct:  264 LKPSMVGPGALSARKGPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQ--SPNPWHVSFSYARALQNTCLKTWVEGQENV---KAQDFACAKSNSLAQLGKYTGEGESEE 381          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.506e-20
Identity = 60/136 (44.12%), Postives = 80/136 (58.82%), Query Frame = -3
Query:  298 LKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKP MVTPG++   K  P  +AE+T++ L    P  VP ++FLSGGQSE E+T NLNAMNQ  +  PW +SFS+ RAL  + LK W      VQ  +     R KANS+A  G Y    + G+ AA+ ++ K   Y
Sbjct:  242 LKPAMVTPGADCKNKAGPAKVAEYTLKMLAARAPP-VPGIMFLSGGQSELESTLNLNAMNQ--SPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTE-GKEAAQGMYEKGKGY 372          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.311e-19
Identity = 55/118 (46.61%), Postives = 74/118 (62.71%), Query Frame = -3
Query:  355 LKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAPFLVRCKANSEATLGTYKG 702
            LK +MV  G    +  + + +AE TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK WA     N  KAQ     R K N  A LG +KG
Sbjct:  218 LKASMVISGKSCEEQASIEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWAKDMTGNFAKAQQVIYERAKENGLAALGKWKG 334          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.981e-19
Identity = 54/118 (45.76%), Postives = 74/118 (62.71%), Query Frame = -3
Query:  355 LKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAPFLVRCKANSEATLGTYKG 702
            LK +MV  G    +  + + +AE TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK W+     N  KAQ     R K N  A LG +KG
Sbjct:  218 LKASMVISGKGCEEQASVEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWSKDMTGNYAKAQQIIYERAKENGLAALGKWKG 334          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.022e-16
Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = -3
Query:  415 LKPNMVTPGSEA-PKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQ 702
            +K + VT G  +  K TP  +A  T+RAL  T+P  +P +VFLSGG   E+A   LNA+N  +  + WSLSFSF RAL    L+ W G + N+++AQ
Sbjct:  220 IKASYVTSGQLSNEKYTPKKVATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARALTDGVLETWRGDDSNIEEAQ 316          
The following BLAST results are available for this feature:
BLAST of CN188813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF_TRYBB1.353e-2450.43Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]
ALF1_XYLFA1.401e-2148.31Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFT4.075e-2147.46Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALFC_SPIOL2.641e-2046.34Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC_CHLRE4.506e-2044.12Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF1_XANAC1.311e-1946.61Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANCP4.981e-1945.76Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF_ENCCU3.022e-1644.33Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006M23_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188813 ID=CN188813; Name=CN188813; organism=Citrus sinensis; type=EST; length=704bp
TTTTTTTTTTTTTTTTTAGCACAAGAAAACATTATCAACTTTTTGACAAA
ATCACAGAAATTTAGTGCCATTAGGGGAACGGAAAAAAAAAGAAAAACAA
AAACAAAAGCATAAACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCAA
ACCGAAGTTCCCAAGCTTTTTATTGCTCCACCTAAATATGAAAGGGCTCT
AAAACTATGAATGAGAATGGGCCAACCTAATGTTCATACCGCCATTTACT
CTCATAAAGTTCATAAAGCACAACACCCAAAGCTTCAACTGTGCTTAGTA
TTTGTAGTCCTTGACATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGG
CATCACCCTTGTAAGTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTG
ACAAGGAAGGGGGCCTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCA
TGCCTTGAGAGTGCTCTGCTGAAGTGCACGTCCAAAGGAGAAGGAAAGTG
ACCATGGCTTCTTCGTCTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTA
GCCTCCTCCTCACTCTGCCCACCAGACAAGAACACAACAGCAGGAACTGC
TGCAGGCATAGTGCGTTGCAGGGCCCGGACAGTGTGTTCAGCAATCACGT
CCGGTGTAACTTTGGGAGCTTCAGATCCAGGGGTCACCATGTTGGGCTTC
AAAA
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