CN181958

Overview
NameCN181958
Unique NameCN181958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181958 vs. ExPASy Swiss-Prot
Match: Y464_KLULA (Uncharacterized protein KLLA0D02464g OS=Kluyveromyces lactis GN=KLLA0D02464g PE=4 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.537e-26
Identity = 66/178 (37.08%), Postives = 102/178 (57.30%), Query Frame = -2
Query:   94 PLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALTSALKDRRFPPIQARELPSLECTVSILTDFET---------ANNYLDWEVGTHGLIIEFTDPEYSTRRSATYLPEVAAHEGWTKVEAIDSLMRKAGFSGPITESLRKRIR----LTRYQSTLFALHYSDYASYVKTTRGA 588
            PLFVTWKK+  G E +LRGCIGT     +  G K YAL SAL+D RF PI+  EL  L C  ++L+ F+T         + +  +WE+G HG+ I+F  P+ ++R SAT+LPEV   +GW + E  ++L+ KAG    + E ++   +    + RY+ T   + + ++ + + T   A
Sbjct:   50 PLFVTWKKLKKG-EYQLRGCIGTFSEGKIEEGLKRYALISALQDSRFTPIEREELSQLRCGCNLLSQFKTIYSSEGTGNSGDIWNWEIGKHGIEIKFRHPKTNSRMSATFLPEVIPEQGWDQRETFENLIEKAGCWNYLEEVMKHWEKYFDEVIRYEGTKSEIAWDEFETGLSTVAEA 226          
BLAST of CN181958 vs. ExPASy Swiss-Prot
Match: YO289_YEAST (Uncharacterized protein YOR289W OS=Saccharomyces cerevisiae GN=YOR289W PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.375e-24
Identity = 64/179 (35.75%), Postives = 99/179 (55.31%), Query Frame = -2
Query:  109 LFVTWKK------VVNGGEPR--LRGCIGTLEARCLINGFKDYALTSALKDRRFPPIQARELPSLECTVSILTDFETA--------NNYLDWEVGTHGLIIEFTDPEYSTRRSATYLPEVAAHEGWTKVEAIDSLMRKAGFSGPITESLRK----RIRLTRYQSTLFALHYSDYASYVK 585
            LF+TWKK       ++  E    LRGCIGT     + +G + Y+L +AL+DRRF PIQ REL  L+C+ +IL +F+T          +  DWE+G HG+ + F  P+  T  SAT+LP+V   + W K +   +L+ KAG+ G I+E +       I + RY+    ++ Y ++   +K
Sbjct:   69 LFITWKKKSNKHHTIDTNEENYILRGCIGTFAKMPIAHGIEKYSLIAALEDRRFSPIQKRELVDLKCSCNILGNFKTIFRGGGNPNGDIFDWELGKHGIELYFKHPKTGTTCSATFLPDVMPEQHWNKEDTFANLIEKAGYWGNISEVMDNFETYFIEVIRYEGKKSSITYEEFNKQLK 247          
The following BLAST results are available for this feature:
BLAST of CN181958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
Y464_KLULA2.537e-2637.08Uncharacterized protein KLLA0D02464g OS=Kluyveromy... [more]
YO289_YEAST2.375e-2435.75Uncharacterized protein YOR289W OS=Saccharomyces c... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001L17_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001L17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181958 ID=CN181958; Name=CN181958; organism=Citrus sinensis; type=EST; length=718bp
GATTTGTTTAGGCCATACCAGCTTTGCTGTTTTAGCGAAAGCGGTTTGGA
AGAATCAATAGTTGCCAGGCTTAGCCCCAAGAATGGACGGAGCTGCACCC
CTAGTTGTCTTCACATAAGAGGCATAGTCGCTGTAGTGCAATGCAAATAG
TGTGCTCTGGTAACGAGTCAGTCGTATACGCTTGCGGAGTGACTCGGTGA
TGGGACCACTGAAGCCTGCTTTTCGCATCAGTGAGTCGATTGCCTCCACT
TTAGTCCATCCTTCATGGGCAGCCACTTCAGGAAGGTATGTGGCACTTCG
CCTTGTACTATATTCAGGGTCAGTAAACTCAATAATTAAACCATGTGTTC
CAACCTCCCAGTCAAGATAGTTGTTAGCAGTTTCAAAATCAGTCAAAATA
GAAACTGTACATTCCAAGGATGGCAGCTCTCTAGCTTGTATAGGAGGAAA
CCTTCGGTCCTTCAATGCACTGGTCAAAGCATAGTCCTTAAAGCCATTAA
TCAAGCAACGAGCTTCCAGAGTTCCGATACATCCACGCAAACGAGGTTCC
CCACCATTCACCACTTTCTTCCAAGTGACAAACAATGGGTGTTGGCCTTC
GTCAAAGGCGGGAGGGGGAGCGTCCTCGCTGTTGTAGTGAGCCACCAGAG
TGTCGAAACAGTACACCGCCATTTCCCGATTTGCCGACACCATTTTTTAA
AAAAAAAATTTCTTTCAA
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