CN181957

Overview
NameCN181957
Unique NameCN181957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length649
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9699 contig Csv1_Contig9699:119..768. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181957 vs. ExPASy Swiss-Prot
Match: Y464_KLULA (Uncharacterized protein KLLA0D02464g OS=Kluyveromyces lactis GN=KLLA0D02464g PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.074e-25
Identity = 63/168 (37.50%), Postives = 97/168 (57.74%), Query Frame = 2
Query:  176 PLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALTSALKDRRFPPIQARELPSLECTVSILTDFET---------ANNYLDWEVGTHGLIIEFTDPEYSTRRSATYLPEVAAHEGWTKVEAIDSLMRKASFSGPITESLRKRIR----LTRYQSTLFALHYSDY 640
            PLFVTWKK+  G E +LRGCIGT     +  G K YAL SAL+D RF PI+  EL  L C  ++L+ F+T         + +  +WE+G HG+ I+F  P+ ++R SAT+LPEV   +GW + E  ++L+ KA     + E ++   +    + RY+ T   + + ++
Sbjct:   50 PLFVTWKKLKKG-EYQLRGCIGTFSEGKIEEGLKRYALISALQDSRFTPIEREELSQLRCGCNLLSQFKTIYSSEGTGNSGDIWNWEIGKHGIEIKFRHPKTNSRMSATFLPEVIPEQGWDQRETFENLIEKAGCWNYLEEVMKHWEKYFDEVIRYEGTKSEIAWDEF 216          
BLAST of CN181957 vs. ExPASy Swiss-Prot
Match: YO289_YEAST (Uncharacterized protein YOR289W OS=Saccharomyces cerevisiae GN=YOR289W PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.203e-23
Identity = 62/174 (35.63%), Postives = 96/174 (55.17%), Query Frame = 2
Query:  179 LFVTWKK------VVNGGEPR--LRGCIGTLEARCLINGFKDYALTSALKDRRFPPIQARELPSLECTVSILTDFETA--------NNYLDWEVGTHGLIIEFTDPEYSTRRSATYLPEVAAHEGWTKVEAIDSLMRKASFSGPITESLRK----RIRLTRYQSTLFALHYSDY 640
            LF+TWKK       ++  E    LRGCIGT     + +G + Y+L +AL+DRRF PIQ REL  L+C+ +IL +F+T          +  DWE+G HG+ + F  P+  T  SAT+LP+V   + W K +   +L+ KA + G I+E +       I + RY+    ++ Y ++
Sbjct:   69 LFITWKKKSNKHHTIDTNEENYILRGCIGTFAKMPIAHGIEKYSLIAALEDRRFSPIQKRELVDLKCSCNILGNFKTIFRGGGNPNGDIFDWELGKHGIELYFKHPKTGTTCSATFLPDVMPEQHWNKEDTFANLIEKAGYWGNISEVMDNFETYFIEVIRYEGKKSSITYEEF 242          
The following BLAST results are available for this feature:
BLAST of CN181957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
Y464_KLULA3.074e-2537.50Uncharacterized protein KLLA0D02464g OS=Kluyveromy... [more]
YO289_YEAST2.203e-2335.63Uncharacterized protein YOR289W OS=Saccharomyces c... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001L17_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001L17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181957 ID=CN181957; Name=CN181957; organism=Citrus sinensis; type=EST; length=649bp
CTTAGTAGGGAAAAAAAACCAGCCATTTCTCGAGCTTTGAAGAAATTGAA
AGAAATTTTTTTTTTAAAAAATGGTGTCGGCAAATCGGGAAATGGCGGTG
TACTGTTTCGACACTCTGGTGGCTCACTACAACAGCGAGGACGCTCCCCC
TCCCGCCTTTGACGAAGGCCAACACCCATTGTTTGTCACTTGGAAGAAAG
TGGTGAATGGTGGGGAACCTCGTTTGCGTGGATGTATCGGAACTCTGGAA
GCTCGTTGCTTGATTAATGGCTTTAAGGACTATGCTTTGACCAGTGCATT
GAAGGACCGAAGGTTTCCTCCTATACAAGCTAGAGAGCTGCCATCCTTGG
AATGTACAGTTTCTATTTTGACTGATTTTGAAACTGCTAACAACTATCTT
GACTGGGAGGTTGGAACACATGGTTTAATTATTGAGTTTACTGACCCTGA
ATATAGTACAAGGCGAAGTGCCACATACCTTCCTGAAGTGGCTGCCCATG
AAGGATGGACTAAAGTGGAGGCAATCGACTCACTGATGCGAAAAGCAAGC
TTCAGTGGTCCCATCACCGAGTCACTCCGCAAGCGTATACGACTGACTCG
TTACCAGAGCACACTATTTGCATTGCACTACAGCGACTATGCCTCTTAT
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