CN181955

Overview
NameCN181955
Unique NameCN181955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_BRAHW (S-adenosylmethionine synthetase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=metK PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 4.715e-51
Identity = 96/164 (58.54%), Postives = 121/164 (73.78%), Query Frame = 2
Query:   89 KMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDI--GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 565
            +++ + F+SESV EGHPDK+CD +SDAVLD CL+QDP S+VACET  KT M+M+ GEITTKAK+DY+KI RDT R IG+ S D+G DAD C V+ +I +QSPDI  GV    G F     ++  GAGDQG MFGYA +ET  FMPL+  LA +L  RLT+VRK+
Sbjct:    3 EIKNYYFSSESVTEGHPDKICDAVSDAVLDECLKQDPNSRVACETLAKTGMIMIAGEITTKAKLDYQKIARDTVRRIGYTSSDMGFDADTCAVMESIAEQSPDIDMGVSAGKGLFNSESSNVSEGAGDQGIMFGYAINETETFMPLTIHLAHRLAERLTKVRKD 166          

HSP 2 Score: 30.0314 bits (66), Expect = 4.715e-51
Identity = 12/14 (85.71%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  579 WLRPDGKTQVTVEY 620
            +LRPDGK+QVTVEY
Sbjct:  171 YLRPDGKSQVTVEY 184          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_DROME (S-adenosylmethionine synthetase OS=Drosophila melanogaster GN=M(2)21AB PE=1 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 6.144e-51
Identity = 95/156 (60.90%), Postives = 120/156 (76.92%), Query Frame = 2
Query:   98 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 565
            TFLFTSESV EGHPDK+CDQISDA+LDA L+QDP +KVACET  KT M+++ GEIT+KA VDY+K+VR+T + IG+     G D   C VL+ ++QQSP+IA GV  H  +  E+IGAGDQG MFGYATDET E MPL+ VLA KL  ++ E+R++
Sbjct:   28 TFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVAKTGMILLCGEITSKAVVDYQKVVRETVQHIGYDDSSKGFDFKTCNVLLALDQQSPEIAAGV--HVNRAEEEIGAGDQGIMFGYATDETEECMPLTVVLAHKLNEKIAELRRS 181          

HSP 2 Score: 28.8758 bits (63), Expect = 6.144e-51
Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  579 WLRPDGKTQVTVEY 620
            W RPD KTQVT EY
Sbjct:  186 WARPDSKTQVTCEY 199          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK5_CAEEL (Probable S-adenosylmethionine synthetase 5 OS=Caenorhabditis elegans GN=sams-5 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.044e-50
Identity = 97/158 (61.39%), Postives = 118/158 (74.68%), Query Frame = 2
Query:  101 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            FLFTSESV+EGHPDK+CDQISDAVLDA L QDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H  K   D+GAGDQG MFGYATDET E MPL+ +L+ KL  +L E+R++  L
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGEL 161          

HSP 2 Score: 31.9574 bits (71), Expect = 1.044e-50
Identity = 14/24 (58.33%), Postives = 17/24 (70.83%), Query Frame = 3
Query:  549 RRLGRIVTCSWLRPDGKTQVTVEY 620
            RR G +    W+RPD KTQVT+EY
Sbjct:  156 RRSGEL---EWVRPDSKTQVTIEY 176          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_PROMH (S-adenosylmethionine synthetase OS=Proteus mirabilis (strain HI4320) GN=metK PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 3.857e-47
Identity = 98/161 (60.87%), Postives = 113/161 (70.19%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            M T LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MVMV GEITTKA VD E+I R T R IG+ S D+G DA+ C V+  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  +VRKN  L
Sbjct:    1 MTTHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEITTKAWVDIEEITRKTVREIGYTSSDMGFDANSCAVISAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAQVRKNGTL 158          

HSP 2 Score: 28.8758 bits (63), Expect = 3.857e-47
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEY 620
            T  WLRPD K+Q+T +Y
Sbjct:  157 TLPWLRPDAKSQITFQY 173          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_PHOPR (S-adenosylmethionine synthetase OS=Photobacterium profundum GN=metK PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.027e-47
Identity = 96/161 (59.63%), Postives = 115/161 (71.43%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MVMV GEITT A VD E+I R+T R IG+V+ ++G DA+ C VL  I +QSPDI QGV     + P ++GAGDQG MFGYA+DET   MP     A +L  R  +VRKN  L
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRETIREIGYVNSEMGFDANSCAVLSAIGKQSPDINQGVD---REDPRELGAGDQGIMFGYASDETDVLMPAPVTYAHRLVQRQAKVRKNGTL 158          

HSP 2 Score: 28.1054 bits (61), Expect = 5.027e-47
Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEY 620
            T  WLRPD K+QVT  Y
Sbjct:  157 TLPWLRPDAKSQVTFAY 173          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_PHOLL (S-adenosylmethionine synthetase OS=Photorhabdus luminescens subsp. laumondii GN=metK PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.538e-47
Identity = 98/161 (60.87%), Postives = 114/161 (70.81%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            M T+LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MVMV GEITT A VD E+I R T R IG+V+ ++G DA+ C VL  I +QSPDI QGV     + P   GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN  L
Sbjct:    1 MTTYLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRQTVREIGYVNSEMGFDANSCAVLSAIGKQSPDINQGVD---REDPLQQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGVL 158          

HSP 2 Score: 28.1054 bits (61), Expect = 8.538e-47
Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  579 WLRPDGKTQVTVEY 620
            WLRPD K+QVT +Y
Sbjct:  160 WLRPDAKSQVTFQY 173          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_PSEA6 (S-adenosylmethionine synthetase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.113e-46
Identity = 96/161 (59.63%), Postives = 113/161 (70.19%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            M   LFTSESV+EGHPDK+ DQISDAVLDA L+QDP+++VACET  KT MVMV GE+TT A VD E++ R+T R IG+   D+G DAD C VL  I +QSPDI QGV      RPED GAGDQG MFGYA+DET   MP     A +L  R  E+RK+  L
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILKQDPKARVACETYVKTGMVMVGGEVTTNAWVDIEELTRNTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGVD---RTRPEDQGAGDQGLMFGYASDETDVLMPAPVTYAHRLVKRQAEIRKSGQL 158          

HSP 2 Score: 26.5646 bits (57), Expect = 1.113e-46
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  579 WLRPDGKTQVTVEY 620
            WLRPD K+QVT  Y
Sbjct:  160 WLRPDAKSQVTFVY 173          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_CLOPH (S-adenosylmethionine synthetase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=metK PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.890e-46
Identity = 94/165 (56.97%), Postives = 112/165 (67.88%), Query Frame = 2
Query:  104 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            LFTSESV EGHPDK+CDQISDAVLDA LEQDP S+VACET   T +V+V GEITT   VD +KIVRDT + IG+     G DAD C V+V +++QS DIA GV      +         E IGAGDQG MFGYA++ET E MP    LA KL  +L++VRK+  L
Sbjct:    6 LFTSESVTEGHPDKICDQISDAVLDALLEQDPMSRVACETAITTGLVLVMGEITTSGYVDIQKIVRDTVKEIGYDRAKYGFDADTCGVIVALDEQSKDIALGVDKALEAKQNEMTDEAIEAIGAGDQGMMFGYASNETEELMPYPISLAHKLTKQLSKVRKDGTL 170          

HSP 2 Score: 33.113 bits (74), Expect = 1.890e-46
Identity = 14/17 (82.35%), Postives = 16/17 (94.12%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEY 620
            T S+LRPDGK+QVTVEY
Sbjct:  169 TLSYLRPDGKSQVTVEY 185          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_VIBCM (S-adenosylmethionine synthetase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=metK PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.890e-46
Identity = 96/157 (61.15%), Postives = 110/157 (70.06%), Query Frame = 2
Query:  104 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            LFTSESV+EGHPDK+ DQISDAVLDA  EQDP+++VACET  KT MVMV GEITT A VD E+I R T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P++ GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN  L
Sbjct:    6 LFTSESVSEGHPDKIADQISDAVLDAIFEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRQTVREIGYVHSDMGFDANSCAVLNTIGKQSPDINQGVD---KADPKEQGAGDQGIMFGYATNETEVLMPAPITYAHRLMQRQAEVRKNGTL 159          

HSP 2 Score: 29.261 bits (64), Expect = 1.890e-46
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEY 620
            T  WLRPD K+QVT +Y
Sbjct:  158 TLPWLRPDAKSQVTFQY 174          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_VIBC3 (S-adenosylmethionine synthetase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=metK PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.890e-46
Identity = 96/157 (61.15%), Postives = 110/157 (70.06%), Query Frame = 2
Query:  104 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            LFTSESV+EGHPDK+ DQISDAVLDA  EQDP+++VACET  KT MVMV GEITT A VD E+I R T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P++ GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN  L
Sbjct:    6 LFTSESVSEGHPDKIADQISDAVLDAIFEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRQTVREIGYVHSDMGFDANSCAVLNTIGKQSPDINQGVD---KADPKEQGAGDQGIMFGYATNETEVLMPAPITYAHRLMQRQAEVRKNGTL 159          

HSP 2 Score: 29.261 bits (64), Expect = 1.890e-46
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEY 620
            T  WLRPD K+QVT +Y
Sbjct:  158 TLPWLRPDAKSQVTFQY 174          
The following BLAST results are available for this feature:
BLAST of CN181955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BRAHW4.715e-5158.54S-adenosylmethionine synthetase OS=Brachyspira hyo... [more]
METK_DROME6.144e-5160.90S-adenosylmethionine synthetase OS=Drosophila mela... [more]
METK5_CAEEL1.044e-5061.39Probable S-adenosylmethionine synthetase 5 OS=Caen... [more]
METK_PROMH3.857e-4760.87S-adenosylmethionine synthetase OS=Proteus mirabil... [more]
METK_PHOPR5.027e-4759.63S-adenosylmethionine synthetase OS=Photobacterium ... [more]
METK_PHOLL8.538e-4760.87S-adenosylmethionine synthetase OS=Photorhabdus lu... [more]
METK_PSEA61.113e-4659.63S-adenosylmethionine synthetase OS=Pseudoalteromon... [more]
METK_CLOPH1.890e-4656.97S-adenosylmethionine synthetase OS=Clostridium phy... [more]
METK_VIBCM1.890e-4661.15S-adenosylmethionine synthetase OS=Vibrio cholerae... [more]
METK_VIBC31.890e-4661.15S-adenosylmethionine synthetase OS=Vibrio cholerae... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001L15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181955 ID=CN181955; Name=CN181955; organism=Citrus sinensis; type=EST; length=625bp
GAGGATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGAATCT
TAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGAGACC
TTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGTTGTG
CGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCAGGATCCTG
AGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCATGGTC
TTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCG
CGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGACG
CCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGATATT
GCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGC
TGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCTCTGAAT
TTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACG
GAGGTTAGGAAGAATAGTAACCTGCTCTTGGCTAAGGCCCGATGGGAAGA
CCCAGGTCACTGTTGAGTACTACAA
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