CN181955

Overview
NameCN181955
Unique NameCN181955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_CYAP4 (S-adenosylmethionine synthetase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.662e-41
Identity = 85/167 (50.90%), Postives = 111/167 (66.47%), Query Frame = 2
Query:   95 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP-------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            + +LFTSESV EGHPDK+CDQISD +LDA L QDP+S+VA E    T +V++ GEIT++A+V+Y  +VR     IG+ S + G  A  C VLV +++QSPDIAQGV+     R        + IGAGDQG MFG+A +ET EFMPL   LA ++  +L  VRK   L
Sbjct:    3 QRYLFTSESVTEGHPDKICDQISDTILDALLSQDPQSRVAAEVVVNTGLVLITGEITSQAQVNYVDLVRKKITEIGYTSAENGFCATSCAVLVALDEQSPDIAQGVNVAQESRQQLSDEALDRIGAGDQGIMFGFACNETPEFMPLPISLAHRMARKLAAVRKTHQL 169          

HSP 2 Score: 28.4906 bits (62), Expect = 1.662e-41
Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  579 WLRPDGKTQVTVEY 620
            +LRPDGKTQVTV Y
Sbjct:  171 YLRPDGKTQVTVIY 184          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_PSYWF (S-adenosylmethionine synthetase OS=Psychrobacter sp. (strain PRwf-1) GN=metK PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.664e-41
Identity = 84/157 (53.50%), Postives = 109/157 (69.43%), Query Frame = 2
Query:  104 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            LFTSESV+EGHPDK+ DQISDA+LDA + +D  ++VACET  KT  V++ GEI+T A +D E+IVRDT  SIG+   D+G D + C V+  I +QSP+IAQGV       PED GAGDQG MFGYA++ET   MP     A +L  R +E+R++  L
Sbjct:    6 LFTSESVSEGHPDKMADQISDALLDAIMREDLHARVACETLVKTGAVVLAGEISTTANIDIERIVRDTVNSIGYNHSDLGFDGETCAVINMIGKQSPEIAQGVD---RMNPEDQGAGDQGLMFGYASNETEVLMPAPIEFAHRLMERQSELRRSGEL 159          

HSP 2 Score: 28.8758 bits (63), Expect = 1.664e-41
Identity = 13/24 (54.17%), Postives = 16/24 (66.67%), Query Frame = 3
Query:  549 RRLGRIVTCSWLRPDGKTQVTVEY 620
            RR G +    WLRPD K QVT++Y
Sbjct:  154 RRSGEL---KWLRPDAKAQVTLKY 174          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_LEPBL (S-adenosylmethionine synthetase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=metK PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.664e-41
Identity = 85/164 (51.83%), Postives = 114/164 (69.51%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            ++ F+FTSESV EGHPDK+CDQISDA+LDA LEQDP+S+VACET   TN+V++ GEIT+K KVD ++I R+  R IG+    +G DAD   V  ++  QSPDI+QGV    G F ++    GAGDQG MFG+A +ET EFMP+    + +L   L  +R ++ L
Sbjct:    3 LKDFIFTSESVGEGHPDKVCDQISDAILDAYLEQDPKSRVACETLATTNLVVIAGEITSKGKVDAQEIARNVIRDIGYNDITMGFDADFAVVSAHVHAQSPDISQGVTEGEGLFKEQ----GAGDQGLMFGFAINETPEFMPMPIYYSHELVKHLAGLRHSNKL 162          

HSP 2 Score: 27.335 bits (59), Expect = 1.664e-41
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  579 WLRPDGKTQVTVEY 620
            +LRPD K+QVTVEY
Sbjct:  164 FLRPDAKSQVTVEY 177          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_LEPBJ (S-adenosylmethionine synthetase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=metK PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.664e-41
Identity = 85/164 (51.83%), Postives = 114/164 (69.51%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            ++ F+FTSESV EGHPDK+CDQISDA+LDA LEQDP+S+VACET   TN+V++ GEIT+K KVD ++I R+  R IG+    +G DAD   V  ++  QSPDI+QGV    G F ++    GAGDQG MFG+A +ET EFMP+    + +L   L  +R ++ L
Sbjct:    3 LKDFIFTSESVGEGHPDKVCDQISDAILDAYLEQDPKSRVACETLATTNLVVIAGEITSKGKVDAQEIARNVIRDIGYNDITMGFDADFAVVSAHVHAQSPDISQGVTEGEGLFKEQ----GAGDQGLMFGFAINETPEFMPMPIYYSHELVKHLAGLRHSNKL 162          

HSP 2 Score: 27.335 bits (59), Expect = 1.664e-41
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  579 WLRPDGKTQVTVEY 620
            +LRPD K+QVTVEY
Sbjct:  164 FLRPDAKSQVTVEY 177          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_ACTSZ (S-adenosylmethionine synthetase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=metK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.664e-41
Identity = 89/161 (55.28%), Postives = 105/161 (65.22%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            M T LFTSESV+EGHPDK+ DQISDAVLD  L+QDP+++VACET  KT M +V GEITT A VD E + R     IG+   D+G D   C VL  I +QS DI QGV     + P D GAGDQG MFGYAT+ET  FMP     A +L  R  +VRK+  L
Sbjct:    1 MSTHLFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVICDIGYKHSDMGFDGHSCAVLNAIGKQSQDINQGVD---RENPLDQGAGDQGIMFGYATNETEVFMPAPITYAHRLMERQAKVRKDGTL 158          

HSP 2 Score: 28.1054 bits (61), Expect = 1.664e-41
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEY 620
            T  WLRPD K+Q+T +Y
Sbjct:  157 TLDWLRPDAKSQLTFKY 173          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_SORC5 (S-adenosylmethionine synthetase OS=Sorangium cellulosum (strain So ce56) GN=metK PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.163e-41
Identity = 89/164 (54.27%), Postives = 112/164 (68.29%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            M  + FTSESV EGHPDK+CDQISDA+LD  LE+DP ++VACET  KT M +V GEITT A VD   +VR+T + IG+    +G D + C VL  IE+QSPDI++GV    G F ++    GAGDQG MFGYATDETSE MP     A +L  +L ++RK+  L
Sbjct:    1 MRRYQFTSESVTEGHPDKVCDQISDAILDGILEKDPTARVACETLVKTGMAVVAGEITTSAWVDMPVVVRNTIKDIGYTDAAMGFDYETCAVLTAIEKQSPDISRGVTEGEGLFKEQ----GAGDQGLMFGYATDETSELMPSPISYAHRLARKLADLRKSKKL 160          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_NITOC (S-adenosylmethionine synthetase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=metK PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 2.167e-41
Identity = 85/156 (54.49%), Postives = 106/156 (67.95%), Query Frame = 2
Query:  107 FTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            FTSESV+EGHPDK+ DQISD +LDA L QD  ++VACET  KT MV+V GEITT+A +DYE+I+R+T   IG+   ++G D   C V+  I +QS DIAQGV     +  ED GAGDQG MFGYA+DET   MP     A +L  R  E+R+N  L
Sbjct:    7 FTSESVSEGHPDKVADQISDVILDAILAQDRRARVACETLVKTGMVLVAGEITTQAHIDYEQIIRETITEIGYNHSEIGFDGATCAVVNAIGKQSSDIAQGVD---RELEEDQGAGDQGMMFGYASDETDVLMPAPITYAHRLVQRQAEIRRNGEL 159          

HSP 2 Score: 26.9498 bits (58), Expect = 2.167e-41
Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  579 WLRPDGKTQVTVEY 620
            WLRPD K+QVT+ Y
Sbjct:  161 WLRPDAKSQVTLLY 174          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_CLAM3 (S-adenosylmethionine synthetase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=metK PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.167e-41
Identity = 88/165 (53.33%), Postives = 104/165 (63.03%), Query Frame = 2
Query:  104 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI--------GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            LFTSESV EGHPDK+CDQISD++LDA L QDP S+ A ET   T +V V GE+TT   VD  +IVRD  R IG+ S +VG D  +C V V+I  QSPDIAQGV   +  R            GAGDQG MFGYA+ +T  FMPL   LA +L  RL  VR +  L
Sbjct:    6 LFTSESVTEGHPDKICDQISDSILDALLTQDPTSRAAVETLVTTGLVHVAGEVTTSGYVDIPQIVRDRIRDIGYDSSEVGFDGSNCGVTVSIGAQSPDIAQGVDRSYESRSGSASTDAHDLQGAGDQGLMFGYASRDTPVFMPLPIYLAHRLAERLAAVRHSGEL 170          

HSP 2 Score: 28.8758 bits (63), Expect = 2.167e-41
Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = 3
Query:  576 SWLRPDGKTQVTVEY 620
            ++LRPDGKTQVT+ Y
Sbjct:  171 AYLRPDGKTQVTIGY 185          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_POLNS (S-adenosylmethionine synthetase OS=Polynucleobacter necessarius (strain STIR1) GN=metK PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 2.168e-41
Identity = 84/158 (53.16%), Postives = 110/158 (69.62%), Query Frame = 2
Query:  101 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            + FTSESV+EGHPDK+ DQISD++LDA L QDP ++VA ET   T +V++ GEITT A VDY ++ R+T R IG+ + D G+D   C VLV  ++QSPDIAQGV         D GAGDQG MFGYA DET+E MPL   L+ +L  R +++R++  L
Sbjct:    5 YFFTSESVSEGHPDKVADQISDSILDAILAQDPTARVAAETLCNTGLVVLAGEITTNANVDYIQVARNTLREIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDKAHDD-GLDQGAGDQGLMFGYACDETAELMPLPIHLSHRLVERQSQLRRDGRL 161          

HSP 2 Score: 30.4166 bits (67), Expect = 2.168e-41
Identity = 14/24 (58.33%), Postives = 18/24 (75.00%), Query Frame = 3
Query:  549 RRLGRIVTCSWLRPDGKTQVTVEY 620
            RR GR+   +WLRPD K+QVT+ Y
Sbjct:  156 RRDGRL---NWLRPDAKSQVTLRY 176          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_WIGBR (S-adenosylmethionine synthetase OS=Wigglesworthia glossinidia brevipalpis GN=metK PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 2.168e-41
Identity = 83/161 (51.55%), Postives = 114/161 (70.81%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            M  +LFTSESV+EGHPDK+ DQISD +LDA L QD +++VACET  KT MV+V GE+ + AK+D E+++R+T + IG+++ ++G DA+ C +L NI +QS DI +G++      P   GAGDQG +FGYAT+ET  FMP     A KL  R +EVRK + L
Sbjct:    1 MNQYLFTSESVSEGHPDKIADQISDTILDAILTQDKKARVACETYIKTGMVLVGGEVNSYAKIDIEELIRNTIKDIGYINSNMGFDANSCAILNNISKQSKDIEKGLN---QLDPYMQGAGDQGIIFGYATNETETFMPAPITYANKLMIRQSEVRKKNIL 158          

HSP 2 Score: 25.7942 bits (55), Expect = 2.168e-41
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  579 WLRPDGKTQVTVEY 620
            WLRPD K+Q+T  Y
Sbjct:  160 WLRPDAKSQITFIY 173          
The following BLAST results are available for this feature:
BLAST of CN181955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CYAP41.662e-4150.90S-adenosylmethionine synthetase OS=Cyanothece sp. ... [more]
METK_PSYWF1.664e-4153.50S-adenosylmethionine synthetase OS=Psychrobacter s... [more]
METK_LEPBL1.664e-4151.83S-adenosylmethionine synthetase OS=Leptospira borg... [more]
METK_LEPBJ1.664e-4151.83S-adenosylmethionine synthetase OS=Leptospira borg... [more]
METK_ACTSZ1.664e-4155.28S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_SORC52.163e-4154.27S-adenosylmethionine synthetase OS=Sorangium cellu... [more]
METK_NITOC2.167e-4154.49S-adenosylmethionine synthetase OS=Nitrosococcus o... [more]
METK_CLAM32.167e-4153.33S-adenosylmethionine synthetase OS=Clavibacter mic... [more]
METK_POLNS2.168e-4153.16S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK_WIGBR2.168e-4151.55S-adenosylmethionine synthetase OS=Wigglesworthia ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001L15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181955 ID=CN181955; Name=CN181955; organism=Citrus sinensis; type=EST; length=625bp
GAGGATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGAATCT
TAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGAGACC
TTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGTTGTG
CGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCAGGATCCTG
AGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCATGGTC
TTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCG
CGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGACG
CCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGATATT
GCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGC
TGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCTCTGAAT
TTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACG
GAGGTTAGGAAGAATAGTAACCTGCTCTTGGCTAAGGCCCGATGGGAAGA
CCCAGGTCACTGTTGAGTACTACAA
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