CN181955

Overview
NameCN181955
Unique NameCN181955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_PSEF5 (S-adenosylmethionine synthetase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=metK PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.808e-40
Identity = 87/160 (54.37%), Postives = 105/160 (65.62%), Query Frame = 2
Query:   95 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            E  LFTSESV+EGHPDK+ DQISDAVLDA + QD  ++VA ET  KT + +V GE+TT A VD E+IVRD    IG+ S DVG D   C V+  I +QSPDI QGV      +PED GAGDQG MFGYA++ET   MP     + +L  R  E RK+  L
Sbjct:    3 EYSLFTSESVSEGHPDKIADQISDAVLDAIIAQDKHARVAVETLVKTGVAIVAGEVTTSAWVDLEQIVRDVICDIGYTSSDVGFDGATCGVMNIIGKQSPDINQGVD---RAKPEDQGAGDQGLMFGYASNETEVLMPAPITFSHQLVQRQAEARKSGLL 159          

HSP 2 Score: 27.335 bits (59), Expect = 8.808e-40
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  579 WLRPDGKTQVTVEY 620
            WLRPD K+QVT  Y
Sbjct:  161 WLRPDAKSQVTCRY 174          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_COXBR (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=metK PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 8.809e-40
Identity = 83/159 (52.20%), Postives = 103/159 (64.78%), Query Frame = 2
Query:   98 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            T LFTSESV+EGHPDK+ DQISDAVLDA + QDP  +VACE   K+ MV V GEITT A  D E+I R+T   IG+    +G D + C V+  I +QSPDI  GV G   +  +++GAGDQG MFGYA+ ET  FMP     A +L  +   +RKN  L
Sbjct:    4 TTLFTSESVSEGHPDKVADQISDAVLDALIGQDPNCRVACEAVVKSGMVFVAGEITTNAWADVEQITRNTVLQIGYNDPHLGFDGETCAVVTAIGKQSPDIVMGVDG---REDQELGAGDQGLMFGYASRETDVFMPAPITYAHRLVRQQALLRKNGRL 159          

HSP 2 Score: 28.8758 bits (63), Expect = 8.809e-40
Identity = 13/24 (54.17%), Postives = 17/24 (70.83%), Query Frame = 3
Query:  549 RRLGRIVTCSWLRPDGKTQVTVEY 620
            R+ GR+    WLRPD K+QVT+ Y
Sbjct:  154 RKNGRL---PWLRPDAKSQVTLRY 174          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_COXB2 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuG_Q212) GN=metK PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 8.809e-40
Identity = 83/159 (52.20%), Postives = 103/159 (64.78%), Query Frame = 2
Query:   98 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            T LFTSESV+EGHPDK+ DQISDAVLDA + QDP  +VACE   K+ MV V GEITT A  D E+I R+T   IG+    +G D + C V+  I +QSPDI  GV G   +  +++GAGDQG MFGYA+ ET  FMP     A +L  +   +RKN  L
Sbjct:    4 TTLFTSESVSEGHPDKVADQISDAVLDALIGQDPNCRVACEAVVKSGMVFVAGEITTNAWADVEQITRNTVLQIGYNDPHLGFDGETCAVVTAIGKQSPDIVMGVDG---REDQELGAGDQGLMFGYASRETDVFMPAPITYAHRLVRQQALLRKNGRL 159          

HSP 2 Score: 28.8758 bits (63), Expect = 8.809e-40
Identity = 13/24 (54.17%), Postives = 17/24 (70.83%), Query Frame = 3
Query:  549 RRLGRIVTCSWLRPDGKTQVTVEY 620
            R+ GR+    WLRPD K+QVT+ Y
Sbjct:  154 RKNGRL---PWLRPDAKSQVTLRY 174          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_COXB1 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuK_Q154) GN=metK PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 8.809e-40
Identity = 83/159 (52.20%), Postives = 103/159 (64.78%), Query Frame = 2
Query:   98 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            T LFTSESV+EGHPDK+ DQISDAVLDA + QDP  +VACE   K+ MV V GEITT A  D E+I R+T   IG+    +G D + C V+  I +QSPDI  GV G   +  +++GAGDQG MFGYA+ ET  FMP     A +L  +   +RKN  L
Sbjct:    4 TTLFTSESVSEGHPDKVADQISDAVLDALIGQDPNCRVACEAVVKSGMVFVAGEITTNAWADVEQITRNTVLQIGYNDPHLGFDGEACAVVTAIGKQSPDIVMGVDG---REDQELGAGDQGLMFGYASRETDVFMPAPITYAHRLVRQQALLRKNGRL 159          

HSP 2 Score: 28.8758 bits (63), Expect = 8.809e-40
Identity = 13/24 (54.17%), Postives = 17/24 (70.83%), Query Frame = 3
Query:  549 RRLGRIVTCSWLRPDGKTQVTVEY 620
            R+ GR+    WLRPD K+QVT+ Y
Sbjct:  154 RKNGRL---PWLRPDAKSQVTLRY 174          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_CHLSY (S-adenosylmethionine synthetase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=metK PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.086e-40
Identity = 88/166 (53.01%), Postives = 109/166 (65.66%), Query Frame = 2
Query:  101 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEIT-TKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-------GHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            F FTSESV+EGHPDK+CDQISDA+LDA L  DP+++VA ET T T +++V GE+T  +  +  E+IVR T + IG+ S + G DAD C V+V I  QSPDIA GV        G      E +GAGDQG MFG+A DET E MP S  LA +L  RL  VRK+  L
Sbjct:   11 FYFTSESVSEGHPDKMCDQISDAILDAFLSHDPKARVAVETATTTGLIVVLGEVTYERGYIPIEEIVRRTVKEIGYTSAEYGFDADTCGVMVAIHGQSPDIAMGVDKALEAKIGAMADDVEAVGAGDQGMMFGFACDETPELMPASIALAHRLIRRLERVRKDGTL 176          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_CHLAA (S-adenosylmethionine synthetase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=metK PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.086e-40
Identity = 88/166 (53.01%), Postives = 109/166 (65.66%), Query Frame = 2
Query:  101 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEIT-TKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-------GHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            F FTSESV+EGHPDK+CDQISDA+LDA L  DP+++VA ET T T +++V GE+T  +  +  E+IVR T + IG+ S + G DAD C V+V I  QSPDIA GV        G      E +GAGDQG MFG+A DET E MP S  LA +L  RL  VRK+  L
Sbjct:   11 FYFTSESVSEGHPDKMCDQISDAILDAFLSHDPKARVAVETATTTGLIVVLGEVTYERGYIPIEEIVRRTVKEIGYTSAEYGFDADTCGVMVAIHGQSPDIAMGVDKALEAKIGAMADDVEAVGAGDQGMMFGFACDETPELMPASIALAHRLIRRLERVRKDGTL 176          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_BLOFL (S-adenosylmethionine synthetase OS=Blochmannia floridanus GN=metK PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.086e-40
Identity = 85/161 (52.80%), Postives = 113/161 (70.19%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            M  FLFTSESV+ GHPDK+ DQISD++LD+ LEQDP+++VACET  KT +V++ GEITT A V+ EKI R+T + IG+    +GLDA+ C +L  I QQSP+I   ++ H + R +  GAGDQG MFGYAT+ET   MP     A +L  R +++RKN  L
Sbjct:    1 MTRFLFTSESVSAGHPDKIADQISDSILDSILEQDPKARVACETYIKTGIVLIGGEITTTASVNIEKIARNTIQEIGYTHPKMGLDANSCVILSVINQQSPEIQYSIN-HDSDRTQQ-GAGDQGSMFGYATNETDVLMPAPITYAHRLIQRKSKLRKNGTL 159          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_RALPJ (S-adenosylmethionine synthetase OS=Ralstonia pickettii (strain 12J) GN=metK PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.148e-39
Identity = 83/161 (51.55%), Postives = 108/161 (67.08%), Query Frame = 2
Query:  101 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            FLFTSESV+EGHPDK+ DQISDA+LDA L QD  ++VA ET   T +V++ GEITT A VDY  + R+T + IG+ + + G+D   C VLV  ++QSPDIAQGV     +  +D    GAGDQG MFGYA DET E MP     A +L  R +++R++  L
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAILDAILAQDKYARVAAETLCNTGLVVLAGEITTTANVDYIHVARETIKRIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV----DRASDDYLNQGAGDQGLMFGYACDETPELMPFPIYYAHRLVERQSQLRRDGRL 161          

HSP 2 Score: 30.8018 bits (68), Expect = 1.148e-39
Identity = 15/24 (62.50%), Postives = 17/24 (70.83%), Query Frame = 3
Query:  549 RRLGRIVTCSWLRPDGKTQVTVEY 620
            RR GR+    WLRPD K+QVTV Y
Sbjct:  156 RRDGRL---PWLRPDAKSQVTVRY 176          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_PROM4 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9211) GN=metK PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.187e-39
Identity = 85/165 (51.52%), Postives = 109/165 (66.06%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDV-GLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            M  F+FTSESV EGHPDK+CDQISDAVLDA L QDP S+VACE    T + ++ GE+T+ A+VD+  +VR   + IG+      G DA+ C VLV +++QSPDIA+GV     H     + IGAGDQG MFGYA +ET E MPL   LA +L  +L ++R    L
Sbjct:    1 MSQFVFTSESVTEGHPDKICDQISDAVLDALLTQDPHSRVACEAVVNTGLCLITGEVTSTAEVDFINLVRSVIKEIGYKDAQAGGFDANSCAVLVALDKQSPDIAKGVDTAEDHTDDPFDKIGAGDQGIMFGYACNETPELMPLPISLAHRLARQLAKIRHQGTL 165          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_MYCSM (S-adenosylmethionine synthetase OS=Mycobacterium smegmatis GN=metK PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.187e-39
Identity = 96/164 (58.54%), Postives = 106/164 (64.63%), Query Frame = 2
Query:  104 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-GHFTK-----RPEDI-GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            LFTSESV EGHPDK+CD ISD+VLDA LEQDP+S+VA ET   T  V V GE+TT A  D  KIVRD    IG+ S   G D   C V V I  QSPDIAQGV   H T+      P D+ GAGDQG MFGYA  +T E MPL   LA +L  RLTEVRKN  L
Sbjct:    6 LFTSESVTEGHPDKICDAISDSVLDALLEQDPKSRVAVETLVTTGQVHVAGEVTTTAYADIPKIVRDRILDIGYDSSTKGFDGASCGVNVAIGAQSPDIAQGVDTAHETRVEGKADPLDLQGAGDQGLMFGYAIGDTPELMPLPIALAHRLARRLTEVRKNGVL 169          
The following BLAST results are available for this feature:
BLAST of CN181955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_PSEF58.808e-4054.38S-adenosylmethionine synthetase OS=Pseudomonas flu... [more]
METK_COXBR8.809e-4052.20S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXB28.809e-4052.20S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXB18.809e-4052.20S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_CHLSY9.086e-4053.01S-adenosylmethionine synthetase OS=Chloroflexus au... [more]
METK_CHLAA9.086e-4053.01S-adenosylmethionine synthetase OS=Chloroflexus au... [more]
METK_BLOFL9.086e-4052.80S-adenosylmethionine synthetase OS=Blochmannia flo... [more]
METK_RALPJ1.148e-3951.55S-adenosylmethionine synthetase OS=Ralstonia picke... [more]
METK_PROM41.187e-3951.52S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_MYCSM1.187e-3958.54S-adenosylmethionine synthetase OS=Mycobacterium s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001L15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181955 ID=CN181955; Name=CN181955; organism=Citrus sinensis; type=EST; length=625bp
GAGGATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGAATCT
TAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGAGACC
TTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGTTGTG
CGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCAGGATCCTG
AGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCATGGTC
TTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCG
CGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGACG
CCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGATATT
GCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGC
TGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCTCTGAAT
TTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACG
GAGGTTAGGAAGAATAGTAACCTGCTCTTGGCTAAGGCCCGATGGGAAGA
CCCAGGTCACTGTTGAGTACTACAA
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