CN181955

Overview
NameCN181955
Unique NameCN181955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK1_BRAJU (S-adenosylmethionine synthetase 1 OS=Brassica juncea GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 9.273e-85
Identity = 153/171 (89.47%), Postives = 157/171 (91.81%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNLLLAKARWEDP 604
            METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCRSIGF+SDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDET E MPLSHVLATK+GA+LTEVRKN        RW  P
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGT-----CRWLRP 166          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK2_ATRNU (S-adenosylmethionine synthetase 2 OS=Atriplex nummularia GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 1.336e-84
Identity = 141/158 (89.24%), Postives = 149/158 (94.30%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 565
            ++TFLFTSESVNEGHPDKLCDQISDAVLDACL QDPESKVACETCTKTN+VMVFGEITTKA VDYEKIVR TCR IGFVS DVGLDAD+CKVLV IEQQSPDIAQGVHGH ++RPE+IGAGDQGHMFGYA+DET E MPLSHVLATKLGARLTEVRKN
Sbjct:    5 VDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKADVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLSRRPEEIGAGDQGHMFGYASDETPELMPLSHVLATKLGARLTEVRKN 162          

HSP 2 Score: 42.743 bits (99), Expect = 1.336e-84
Identity = 17/18 (94.44%), Postives = 17/18 (94.44%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEYY 623
            TC WLRPDGKTQVTVEYY
Sbjct:  164 TCPWLRPDGKTQVTVEYY 181          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK3_HORVU (S-adenosylmethionine synthetase 3 OS=Hordeum vulgare GN=SAM3 PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 5.043e-84
Identity = 142/157 (90.45%), Postives = 148/157 (94.27%), Query Frame = 2
Query:   95 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 565
            ETFLFTSESVNEGHPDKLCDQ+SDAVLDACL QD +SKVACET TKTNMVMV GEITTKA VDYEKIVRDTCR+IGF+SDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPE++GAGDQG MFGYATDET E MPLSHVLATKLGARLTEVRKN
Sbjct:    4 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDADSKVACETVTKTNMVMVLGEITTKATVDYEKIVRDTCRNIGFISDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGIMFGYATDETPELMPLSHVLATKLGARLTEVRKN 160          

HSP 2 Score: 39.6614 bits (91), Expect = 5.043e-84
Identity = 15/17 (88.24%), Postives = 17/17 (100.00%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEY 620
            TC+W+RPDGKTQVTVEY
Sbjct:  162 TCAWVRPDGKTQVTVEY 178          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_SOLBR (S-adenosylmethionine synthetase OS=Solanum brevidens GN=SAMS PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 3.896e-83
Identity = 152/171 (88.89%), Postives = 156/171 (91.23%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNLLLAKARWEDP 604
            METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTN+VMVFGEITTKA VDYEKIVRDTCR+IGFVSDDVGLDAD+CKVLV IEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN        RW  P
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKAIVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGT-----CRWLKP 166          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_GOSHI (S-adenosylmethionine synthetase OS=Gossypium hirsutum GN=SAMS PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 6.220e-81
Identity = 144/158 (91.14%), Postives = 150/158 (94.94%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 565
            METFLFTSESVNEGHPDKLCDQISDAVLDACL QDPESKVACETC+KTNMVMVFGEITTKA VDYEKIVRDTCR IGF SDDVGLDAD+CK LVNIEQQSPDIAQGVHGH +KRPE+IGAGDQGHMFGYATDET E MPL+HVLAT+LGARLTEVRKN
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCSKTNMVMVFGEITTKADVDYEKIVRDTCRGIGFTSDDVGLDADNCKALVNIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPELMPLTHVLATRLGARLTEVRKN 158          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_CHLRE (S-adenosylmethionine synthetase OS=Chlamydomonas reinhardtii GN=METM PE=3 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.541e-76
Identity = 128/158 (81.01%), Postives = 142/158 (89.87%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 565
            +E+FL+TSESVNEGHPDK+CDQ+SDAVLDACLEQDP+SKVACETC KT MVMVFGEITTKAKVDYE IVR  C+ IGF S+DVGLDAD CKVLV+IE+QSPDI QGVHG  TK  E+IGAGDQGHMFGYATDET E MPL+HVLAT+LG +LTEVRKN
Sbjct:    4 LESFLYTSESVNEGHPDKICDQVSDAVLDACLEQDPDSKVACETCCKTGMVMVFGEITTKAKVDYEAIVRKVCKEIGFTSEDVGLDADKCKVLVHIEEQSPDIGQGVHGMGTKALEEIGAGDQGHMFGYATDETPELMPLTHVLATQLGYKLTEVRKN 161          

HSP 2 Score: 38.1206 bits (87), Expect = 3.541e-76
Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 3
Query:  573 CSWLRPDGKTQVTVEY 620
            C WLRPDGKTQVTVEY
Sbjct:  164 CPWLRPDGKTQVTVEY 179          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_OSTLU (S-adenosylmethionine synthetase OS=Ostreococcus lucimarinus (strain CCE9901) GN=METK-1 PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 5.490e-71
Identity = 121/155 (78.06%), Postives = 132/155 (85.16%), Query Frame = 2
Query:  101 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 565
            FLFTSESVNEGHPDKL DQISD +LDACL QDP+SKVACET TKTNMVMVFGEITTKAKVDYE +VR  CR +GF+SD+ GLD + C+VLV +  QSPDI QGVHG  TK  EDIGAGDQGHMFGYATDET E MPL+HVLATKLG RLT VRK+
Sbjct:    3 FLFTSESVNEGHPDKLADQISDGILDACLAQDPDSKVACETATKTNMVMVFGEITTKAKVDYEAVVRQVCRDVGFISDETGLDGNKCRVLVELHDQSPDIGQGVHGMGTKSDEDIGAGDQGHMFGYATDETPELMPLTHVLATKLGHRLTVVRKD 157          

HSP 2 Score: 35.8094 bits (81), Expect = 5.490e-71
Identity = 13/17 (76.47%), Postives = 15/17 (88.24%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEY 620
            TC W+ PDGKTQVT+EY
Sbjct:  159 TCPWVLPDGKTQVTIEY 175          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.218e-70
Identity = 120/155 (77.42%), Postives = 134/155 (86.45%), Query Frame = 2
Query:  101 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 565
            FLFTSESVNEGHPDKL DQISD +LDACLEQDP+SKVACET TKTNMVMVFGEITTKAKVDYE +VR  CR +GF+S++ GLD ++C+VLV +  QSPDI QGVHG  TK  E+IGAGDQGHMFGYATDET E MPL+HVLATKLG RLT VRK+
Sbjct:    3 FLFTSESVNEGHPDKLADQISDGILDACLEQDPDSKVACETATKTNMVMVFGEITTKAKVDYEAVVRQVCRDVGFISNETGLDGNNCRVLVELHDQSPDIGQGVHGMGTKSLEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGHRLTVVRKD 157          

HSP 2 Score: 35.8094 bits (81), Expect = 1.218e-70
Identity = 13/17 (76.47%), Postives = 15/17 (88.24%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEY 620
            TC W+ PDGKTQVT+EY
Sbjct:  159 TCPWVLPDGKTQVTIEY 175          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK1_PEA (S-adenosylmethionine synthetase 1 (Fragment) OS=Pisum sativum GN=SAMS1 PE=2 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 1.218e-70
Identity = 118/131 (90.08%), Postives = 126/131 (96.18%), Query Frame = 2
Query:  173 LDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 565
            +DACLEQD +SKVACETCTKTN+VMVFGEITTKA VDYEKIVR+TCR+IGFVS DVGLDAD+CKVLVNIEQQSPDIAQGVHGHFTK+PE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN
Sbjct:    3 VDACLEQDSDSKVACETCTKTNLVMVFGEITTKANVDYEKIVRNTCRNIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKN 133          

HSP 2 Score: 41.5874 bits (96), Expect = 1.218e-70
Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEYY 623
            TC+WLRPDG TQVTVEYY
Sbjct:  135 TCAWLRPDGNTQVTVEYY 152          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK3_ACTCH (S-adenosylmethionine synthetase 3 (Fragment) OS=Actinidia chinensis GN=SAM3 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 8.526e-69
Identity = 114/125 (91.20%), Postives = 120/125 (96.00%), Query Frame = 2
Query:  191 QDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 565
            QDP+SKVACETCTKTNMVMVFGEITTK  +DYEKIVRDTCR+IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRK+
Sbjct:    1 QDPDSKVACETCTKTNMVMVFGEITTKGNIDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKD 125          

HSP 2 Score: 42.3578 bits (98), Expect = 8.526e-69
Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEYY 623
            TC WLRPDGKTQVT+EYY
Sbjct:  127 TCPWLRPDGKTQVTIEYY 144          
The following BLAST results are available for this feature:
BLAST of CN181955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_BRAJU9.273e-8589.47S-adenosylmethionine synthetase 1 OS=Brassica junc... [more]
METK2_ATRNU1.336e-8489.24S-adenosylmethionine synthetase 2 OS=Atriplex numm... [more]
METK3_HORVU5.043e-8490.45S-adenosylmethionine synthetase 3 OS=Hordeum vulga... [more]
METK_SOLBR3.896e-8388.89S-adenosylmethionine synthetase OS=Solanum brevide... [more]
METK_GOSHI6.220e-8191.14S-adenosylmethionine synthetase OS=Gossypium hirsu... [more]
METK_CHLRE3.541e-7681.01S-adenosylmethionine synthetase OS=Chlamydomonas r... [more]
METK_OSTLU5.490e-7178.06S-adenosylmethionine synthetase OS=Ostreococcus lu... [more]
METK_OSTTA1.218e-7077.42S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]
METK1_PEA1.218e-7090.08S-adenosylmethionine synthetase 1 (Fragment) OS=Pi... [more]
METK3_ACTCH8.526e-6991.20S-adenosylmethionine synthetase 3 (Fragment) OS=Ac... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001L15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181955 ID=CN181955; Name=CN181955; organism=Citrus sinensis; type=EST; length=625bp
GAGGATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGAATCT
TAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGAGACC
TTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGTTGTG
CGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCAGGATCCTG
AGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCATGGTC
TTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCG
CGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGACG
CCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGATATT
GCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGC
TGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCTCTGAAT
TTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACG
GAGGTTAGGAAGAATAGTAACCTGCTCTTGGCTAAGGCCCGATGGGAAGA
CCCAGGTCACTGTTGAGTACTACAA
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