CN181955

Overview
NameCN181955
Unique NameCN181955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_ACACA (S-adenosylmethionine synthetase OS=Acanthamoeba castellanii GN=metK PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 2.885e-60
Identity = 105/160 (65.62%), Postives = 127/160 (79.38%), Query Frame = 2
Query:   95 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            +T LFTSE V+E HPDKLCDQ+SDA+LDACL  DP SKVACET +KT MVMVFGEITTK+  DY+K++R+T + IGF    +G D   C +LV IEQQSPDIAQGV  H  +  +D+GAGDQGHMFG+AT+ET EFMP++HVLAT+L  R+TEVR NS L
Sbjct:    5 KTLLFTSECVSESHPDKLCDQVSDAILDACLANDPYSKVACETASKTGMVMVFGEITTKSSFDYQKVIRETVKRIGFTDSSIGFDYKTCNILVAIEQQSPDIAQGV--HVGRSDDDLGAGDQGHMFGHATNETPEFMPMTHVLATRLCQRMTEVRNNSIL 162          

HSP 2 Score: 33.4982 bits (75), Expect = 2.885e-60
Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 3
Query:  576 SWLRPDGKTQVTVEY 620
            SW+RPD KTQVTVEY
Sbjct:  163 SWMRPDAKTQVTVEY 177          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_DICDI (S-adenosylmethionine synthetase OS=Dictyostelium discoideum GN=metK PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 1.417e-59
Identity = 109/165 (66.06%), Postives = 126/165 (76.36%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNLLLAK 586
            M ++LFTSESV EGHPDK+CDQ+SDAVLDACL QDP SKVACET TKT MVM+ GEITTKA VDY+K+VR+  + IG+     G D   C VLV IEQQSPDIAQGVH      PEDIGAGDQGHMFGYAT+ET   MPL+H LA++L  +LTE+R N  L  A+
Sbjct:    1 MSSYLFTSESVTEGHPDKICDQVSDAVLDACLAQDPLSKVACETATKTGMVMILGEITTKANVDYQKVVREAVKKIGYDDSSKGFDYKTCNVLVAIEQQSPDIAQGVH-IGKVNPEDIGAGDQGHMFGYATNETPTLMPLTHFLASELVNKLTELRHNGTLAWAR 164          

HSP 2 Score: 32.7278 bits (73), Expect = 1.417e-59
Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEY 620
            T +W RPD KTQVTVEY
Sbjct:  159 TLAWARPDAKTQVTVEY 175          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK2_YEAST (S-adenosylmethionine synthetase 2 OS=Saccharomyces cerevisiae GN=SAM2 PE=1 SV=3)

HSP 1 Score: 214.157 bits (544), Expect = 4.458e-58
Identity = 105/164 (64.02%), Postives = 128/164 (78.05%), Query Frame = 2
Query:   83 LDKMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            + K +TFLFTSESV EGHPDK+CDQ+SDA+LDACLEQDP SKVACET  KT M+MVFGEITTKA++DY++IVRDT + IG+     G D   C VLV IEQQSPDIAQG+  H+ K  ED+GAGDQG MFGYATDET E +PL+ +LA KL   + + R++ +L
Sbjct:    1 MSKSKTFLFTSESVGEGHPDKICDQVSDAILDACLEQDPFSKVACETAAKTGMIMVFGEITTKARLDYQQIVRDTIKKIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGL--HYEKSLEDLGAGDQGIMFGYATDETPEGLPLTILLAHKLNMAMADARRDGSL 162          

HSP 2 Score: 31.9574 bits (71), Expect = 4.458e-58
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  579 WLRPDGKTQVTVEY 620
            WLRPD KTQVTVEY
Sbjct:  164 WLRPDTKTQVTVEY 177          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK1_YEAST (S-adenosylmethionine synthetase 1 OS=Saccharomyces cerevisiae GN=SAM1 PE=1 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 4.852e-57
Identity = 105/159 (66.04%), Postives = 123/159 (77.36%), Query Frame = 2
Query:   98 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            TFLFTSESV EGHPDK+CDQ+SDA+LDACL +DP SKVACET  KT M+MVFGEITTKA++DY+KIVRDT + IG+     G D   C VLV IEQQSPDIAQGVH    K  EDIGAGDQG MFGYATDET E +PL+ +LA KL   + + R++ +L
Sbjct:    4 TFLFTSESVGEGHPDKICDQVSDAILDACLAEDPHSKVACETAAKTGMIMVFGEITTKAQLDYQKIVRDTIKKIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGVHEE--KDLEDIGAGDQGIMFGYATDETPEGLPLTILLAHKLNMAMADARRDGSL 160          

HSP 2 Score: 32.3426 bits (72), Expect = 4.852e-57
Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 3
Query:  576 SWLRPDGKTQVTVEY 620
            +WLRPD KTQVTVEY
Sbjct:  161 AWLRPDTKTQVTVEY 175          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK2_PONAB (S-adenosylmethionine synthetase isoform type-2 OS=Pongo abelii GN=MAT2A PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 3.105e-56
Identity = 103/159 (64.78%), Postives = 123/159 (77.36%), Query Frame = 2
Query:   98 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            TFLFTSESV EGHPDK+CDQISDAVLDA L+QDP++KVACET  KT M+++ GEIT++A VDY+K+VR+  + IG+     G D   C VLV +EQQSPDIAQGV  H  +  EDIGAGDQG MFGYATDET E MPL+ VLA KL A+L E+R+N  L
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTL 173          

HSP 2 Score: 33.113 bits (74), Expect = 3.105e-56
Identity = 15/22 (68.18%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  555 LGRIVTCSWLRPDGKTQVTVEY 620
            L R  T  WLRPD KTQVTV+Y
Sbjct:  167 LRRNGTLPWLRPDSKTQVTVQY 188          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK2_MACFA (S-adenosylmethionine synthetase isoform type-2 OS=Macaca fascicularis GN=MAT2A PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 3.105e-56
Identity = 103/159 (64.78%), Postives = 123/159 (77.36%), Query Frame = 2
Query:   98 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            TFLFTSESV EGHPDK+CDQISDAVLDA L+QDP++KVACET  KT M+++ GEIT++A VDY+K+VR+  + IG+     G D   C VLV +EQQSPDIAQGV  H  +  EDIGAGDQG MFGYATDET E MPL+ VLA KL A+L E+R+N  L
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTL 173          

HSP 2 Score: 33.113 bits (74), Expect = 3.105e-56
Identity = 15/22 (68.18%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  555 LGRIVTCSWLRPDGKTQVTVEY 620
            L R  T  WLRPD KTQVTV+Y
Sbjct:  167 LRRNGTLPWLRPDSKTQVTVQY 188          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK2_HUMAN (S-adenosylmethionine synthetase isoform type-2 OS=Homo sapiens GN=MAT2A PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 3.105e-56
Identity = 103/159 (64.78%), Postives = 123/159 (77.36%), Query Frame = 2
Query:   98 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            TFLFTSESV EGHPDK+CDQISDAVLDA L+QDP++KVACET  KT M+++ GEIT++A VDY+K+VR+  + IG+     G D   C VLV +EQQSPDIAQGV  H  +  EDIGAGDQG MFGYATDET E MPL+ VLA KL A+L E+R+N  L
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTL 173          

HSP 2 Score: 33.113 bits (74), Expect = 3.105e-56
Identity = 15/22 (68.18%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  555 LGRIVTCSWLRPDGKTQVTVEY 620
            L R  T  WLRPD KTQVTV+Y
Sbjct:  167 LRRNGTLPWLRPDSKTQVTVQY 188          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK2_MOUSE (S-adenosylmethionine synthetase isoform type-2 OS=Mus musculus GN=Mat2a PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 4.048e-56
Identity = 102/159 (64.15%), Postives = 123/159 (77.36%), Query Frame = 2
Query:   98 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            TFLFTSESV EGHPDK+CDQISDAVLDA L+QDP++KVACET  KT M+++ GEIT++A +DY+K+VR+  + IG+     G D   C VLV +EQQSPDIAQGV  H  +  EDIGAGDQG MFGYATDET E MPL+ VLA KL A+L E+R+N  L
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAIDYQKVVREAIKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTL 173          

HSP 2 Score: 33.113 bits (74), Expect = 4.048e-56
Identity = 15/22 (68.18%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  555 LGRIVTCSWLRPDGKTQVTVEY 620
            L R  T  WLRPD KTQVTV+Y
Sbjct:  167 LRRNGTLPWLRPDSKTQVTVQY 188          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK2_RAT (S-adenosylmethionine synthetase isoform type-2 OS=Rattus norvegicus GN=Mat2a PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 8.969e-56
Identity = 101/159 (63.52%), Postives = 123/159 (77.36%), Query Frame = 2
Query:   98 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            TFLFTSESV EGHPDK+CDQI+DAVLDA L+QDP++KVACET  KT M+++ GEIT++A +DY+K+VR+  + IG+     G D   C VLV +EQQSPDIAQGV  H  +  EDIGAGDQG MFGYATDET E MPL+ VLA KL A+L E+R+N  L
Sbjct:   17 TFLFTSESVGEGHPDKICDQINDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAIDYQKVVREAIKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTL 173          

HSP 2 Score: 33.113 bits (74), Expect = 8.969e-56
Identity = 15/22 (68.18%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  555 LGRIVTCSWLRPDGKTQVTVEY 620
            L R  T  WLRPD KTQVTV+Y
Sbjct:  167 LRRNGTLPWLRPDSKTQVTVQY 188          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_NEUCR (S-adenosylmethionine synthetase OS=Neurospora crassa GN=eth-1 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.136e-54
Identity = 98/159 (61.64%), Postives = 121/159 (76.10%), Query Frame = 2
Query:   98 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSNL 574
            TFLFTSESV EGHPDK+ DQ+SDA+LDACL +DP SKVACET TKT M+MVFGEITTKAK+DY+K+VR+  + IG+     G D   C +LV IE+QSPDIAQG+  H   R E++GAGDQG MFGYATDET E  PL+ + A KL A ++  R++ +L
Sbjct:   16 TFLFTSESVGEGHPDKIADQVSDAILDACLAEDPLSKVACETATKTGMIMVFGEITTKAKLDYQKVVRNAIKDIGYDDSSKGFDYKTCNLLVAIEEQSPDIAQGL--HLDDRLENLGAGDQGIMFGYATDETPELFPLTLLFAHKLNAAMSAARRDGSL 172          

HSP 2 Score: 31.5722 bits (70), Expect = 8.136e-54
Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  579 WLRPDGKTQVTVEY 620
            WLRPD KTQVT+EY
Sbjct:  174 WLRPDTKTQVTIEY 187          
The following BLAST results are available for this feature:
BLAST of CN181955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ACACA2.885e-6065.63S-adenosylmethionine synthetase OS=Acanthamoeba ca... [more]
METK_DICDI1.417e-5966.06S-adenosylmethionine synthetase OS=Dictyostelium d... [more]
METK2_YEAST4.458e-5864.02S-adenosylmethionine synthetase 2 OS=Saccharomyces... [more]
METK1_YEAST4.852e-5766.04S-adenosylmethionine synthetase 1 OS=Saccharomyces... [more]
METK2_PONAB3.105e-5664.78S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MACFA3.105e-5664.78S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_HUMAN3.105e-5664.78S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MOUSE4.048e-5664.15S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_RAT8.969e-5663.52S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK_NEUCR8.136e-5461.64S-adenosylmethionine synthetase OS=Neurospora cras... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001L15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181955 ID=CN181955; Name=CN181955; organism=Citrus sinensis; type=EST; length=625bp
GAGGATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGAATCT
TAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGAGACC
TTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGTTGTG
CGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCAGGATCCTG
AGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCATGGTC
TTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCG
CGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGACG
CCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGATATT
GCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGC
TGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCTCTGAAT
TTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACG
GAGGTTAGGAAGAATAGTAACCTGCTCTTGGCTAAGGCCCGATGGGAAGA
CCCAGGTCACTGTTGAGTACTACAA
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