CN181947

Overview
NameCN181947
Unique NameCN181947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12140 contig Csv1_Contig12140:12..592. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRK9_ARATH (Putative cysteine-rich receptor-like protein kinase 9 OS=Arabidopsis thaliana GN=CRK9 PE=5 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 8.365e-26
Identity = 67/164 (40.85%), Postives = 95/164 (57.93%), Query Frame = 1
Query:   94 FFMLFLFVIYLSISFQSSFTAAA-DPTYAYHVC--SANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNV--TDRGRFNQIL 570
            F  LFLF      SF +SF A+A DP Y  H C  +  ++  STY TN   LLSS    ASR   YS+GF N T GQ P+ V GLFLCRGD +   C +CV F+  + + RCP  ++ + +Y++C+LRYS+++I ST  T     +L+  N    ++ + NQ +
Sbjct:    7 FIFLFLF------SFLTSFKASAQDPFYLNHYCPNTTTYSRFSTYSTNLRTLLSSF---ASRNASYSTGFQNVTVGQTPDLVTGLFLCRGDLSPEVCSNCVAFSVDEALTRCPSQREAVFYYEECILRYSDKNILSTAITNEGEFILSNTNTISPNQSQINQFI 161          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.093e-25
Identity = 59/150 (39.33%), Postives = 89/150 (59.33%), Query Frame = 1
Query:  103 LFLFVIYLSISFQSSFTAAA-DPTYAYHVCS--ANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVT 543
            L  F+     SF +SF A+A +P Y  H C     ++ NSTY TN   LLSS    ASR   YS+GF N   GQ P++V GLFLCRGD +   C +CV F+  + + RCP+ ++ + +Y++C+LRYS+++  ST+     + + N  N++
Sbjct:   15 LICFIFLFLFSFLTSFKASAQNPFYLNHDCPNRTTYSSNSTYSTNLKTLLSSF---ASRNASYSTGFQNIRAGQTPDRVTGLFLCRGDLSPEVCSNCVAFSVNESLTRCPNQREAVFYYEECILRYSHKNFLSTVTYEGELIMRNPNNIS 161          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRR4_ARATH (Cysteine-rich repeat secretory protein 4 OS=Arabidopsis thaliana GN=CRRSP4 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 7.830e-24
Identity = 62/161 (38.51%), Postives = 93/161 (57.76%), Query Frame = 1
Query:  103 LFLFVIYLSISFQSSFTAA-ADPTYAYHVC---SANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFNQILA 573
            LF F+  LS+ F ++ T + +D  +    C   S NFT  STY+TNR  +LSSL   +S G+     + N T G  P+ V G+FLCRGD + +SC DCV  AT ++ + C   K+  I+Y++C++RYS+ S FS +D  PY+   +     +  RF Q L+
Sbjct:   11 LFCFLSLLSLLFSTNLTISESDHIHMSTFCNQFSDNFTQTSTYETNRETVLSSLRLRSSLGS-----YSNATAGISPDTVRGMFLCRGDISETSCSDCVQTATLEISRNCTYQKEAFIFYEECMVRYSDSSFFSLVDERPYIIRYSLSYAPNLDRFPQTLS 166          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRR7_ARATH (Putative cysteine-rich repeat secretory protein 7 OS=Arabidopsis thaliana GN=CRRSP7 PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.336e-23
Identity = 57/157 (36.31%), Postives = 90/157 (57.32%), Query Frame = 1
Query:  109 LFVIYLSISFQSSFTAAADPTYAYHVCSAN-FTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFNQILAS 576
            LF  + S+    S    + P + +  CS + FT  S+Y+TNRN+LL++L   +S  +     + N T G  P+ VYG+FLCRGD   +SC DCV  A  ++   C   K+  I+YD+C++RYSN S FS  ++ P +   + ++  +  RFNQ L++
Sbjct:   10 LFYFFFSLL---SHQTMSQPQHMHTFCSVDSFTQTSSYETNRNILLTTLSLTSSLVH-----YLNATIGLSPDTVYGMFLCRGDINTTSCSDCVQTAAIEIATNCTLNKRAFIYYDECMVRYSNVSFFSEFESKPVIVRYSLRSAPNSNRFNQTLSN 158          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRR1_ARATH (Cysteine-rich repeat secretory protein 1 OS=Arabidopsis thaliana GN=CRRSP1 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.336e-23
Identity = 57/155 (36.77%), Postives = 93/155 (60.00%), Query Frame = 1
Query:   64 MLGIQMPPSKFFMLFLFVIYLSISFQSSFTAAADPTYAYHVC--SANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNK-VYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVS 519
            M  + +  SK   L  F++  +++        A PTY    C  S N+T NS+Y++N + L+S L + +S     + GFY+  +G  P   VYG +LCRGD ++S+C+ C++ A++++   CP  K+ IIWY++C LRYS+R IFS +D  P+V+
Sbjct:    1 MFSLPLHQSKLIFLLSFLLIKTLN--------AQPTYLLSYCYTSGNYTPNSSYKSNLDTLISVLDSQSS-----NKGFYSYASGSSPTTTVYGSYLCRGDISSSTCETCISRASKNVFIWCPVQKEAIIWYEECFLRYSSRKIFSILDQGPFVT 142          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.075e-23
Identity = 63/165 (38.18%), Postives = 88/165 (53.33%), Query Frame = 1
Query:  100 MLFLFVIYLSISFQ-SSFTAAADPTYAYHVCS---ANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVT-DRGRFNQILASL 579
            ML L +  +S+ FQ   FT  + P     +CS    NFT N+ Y  N + L+SSL +     NG    FYN + G    KV  +  CRGD     C +C+  A + LV  CP  K+ IIWYD+C  RYSNR+IF+ ++  P+ S+  T+N T DR  + + L  L
Sbjct:    1 MLSLLLPLISLLFQIQCFTVKSQPVPLNQICSNVTGNFTVNTPYAVNLDRLISSLSSLRRNVNG----FYNISVGDSDEKVNSISQCRGDVKLEVCINCIAMAGKRLVTLCPVQKEAIIWYDKCTFRYSNRTIFNRLEISPHTSITGTRNFTGDRDSWEKSLRGL 161          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRR38_ARATH (Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana GN=CRRSP38 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.628e-23
Identity = 55/147 (37.41%), Postives = 81/147 (55.10%), Query Frame = 1
Query:  130 ISFQSSFTAAADPTYAYHVCS---ANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFN 561
            +S  +  + + +  + +H CS    +FT  S Y++N N L S L          S+GF   +TG  PN V GL LCRGD ++S C+ C+  A  +L QRCP+ K  I+WYD CL++YS+ + F  +D      L N +NV+D   FN
Sbjct:   20 LSIHTVLSQSQNNAFLFHKCSDIEGSFTSKSLYESNLNNLFSQLSYKVP-----STGFAASSTGNTPNNVNGLALCRGDASSSDCRSCLETAIPELRQRCPNNKAGIVWYDNCLVKYSSTNFFGKIDFENRFYLYNVKNVSDPSTFN 161          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 6.628e-23
Identity = 56/135 (41.48%), Postives = 88/135 (65.19%), Query Frame = 1
Query:  106 FLFVIYLSISFQSSFTAAADPT-YAYHVC--SANFTGNSTYQTNRNLLLSSLPT-NASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTM 498
            F+F+ +    F +SFTA+ +   Y  H+C  +  ++ NS Y TN   LLSSL   NAS    YS+GF +   GQ P++V GLFLCRGD + + C++CV F+  D + +CP  ++++ +YD+C+LRYS+++I ST+
Sbjct:    7 FIFLFF----FLTSFTASVENVFYIKHICPNTTTYSRNSPYLTNLRTLLSSLSAPNAS----YSTGFQSARAGQAPDRVTGLFLCRGDVSPAVCRNCVAFSINDTLVQCPSERKSVFYYDECMLRYSDQNILSTL 133          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRR42_ARATH (Cysteine-rich repeat secretory protein 42/43/44/45/46/47/48/49/50/51/52/53/54 OS=Arabidopsis thaliana GN=CRRSP42 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21
Identity = 55/139 (39.57%), Postives = 79/139 (56.83%), Query Frame = 1
Query:  172 YAYHVCS---ANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFNQILASL 579
            Y +H CS     +   S ++ N NL+LS++    S GN +  GF     G+DPN V+ +F CRGD   S C  C++ A   L +RCP  K  IIWYDQCLL+ S+ + F+ +D      L N  N++DRG FN+  ++L
Sbjct:   33 YLHHKCSNTQGKYKQGSAFEKNLNLVLSTI---TSIGN-FRDGFRYTEEGEDPNNVFVMFQCRGDSYWSKCPPCISTAVSGLRRRCPRNKGAIIWYDQCLLKISSVASFNKIDYENDFYLSNPNNMSDRGLFNKETSAL 167          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRR41_ARATH (Putative cysteine-rich repeat secretory protein 41 OS=Arabidopsis thaliana GN=CRRSP41 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21
Identity = 55/139 (39.57%), Postives = 79/139 (56.83%), Query Frame = 1
Query:  172 YAYHVCS---ANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFNQILASL 579
            Y +H CS     +   S ++ N NL+LS++    S GN +  GF     G+DPN V+ +F CRGD   S C  C++ A   L +RCP  K  IIWYDQCLL+ S+ + F+ +D      L N  N++DRG FN+  ++L
Sbjct:   33 YLHHKCSNTQGKYKQGSAFEKNLNLVLSTI---TSIGN-FRDGFRYTEEGEDPNNVFVMFQCRGDSYWSKCPPCISTAVSGLRRRCPRNKGAIIWYDQCLLKISSVASFNKIDYENDFYLSNPNNMSDRGLFNKETSAL 167          
The following BLAST results are available for this feature:
BLAST of CN181947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CRK9_ARATH8.365e-2640.85Putative cysteine-rich receptor-like protein kinas... [more]
CRK8_ARATH1.093e-2539.33Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRR4_ARATH7.830e-2438.51Cysteine-rich repeat secretory protein 4 OS=Arabid... [more]
CRR7_ARATH1.336e-2336.31Putative cysteine-rich repeat secretory protein 7 ... [more]
CRR1_ARATH1.336e-2336.77Cysteine-rich repeat secretory protein 1 OS=Arabid... [more]
CRK26_ARATH5.075e-2338.18Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRR38_ARATH6.628e-2337.41Cysteine-rich repeat secretory protein 38 OS=Arabi... [more]
CRK15_ARATH6.628e-2341.48Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
CRR42_ARATH6.204e-2139.57Cysteine-rich repeat secretory protein 42/43/44/45... [more]
CRR41_ARATH6.204e-2139.57Putative cysteine-rich repeat secretory protein 41... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0001L10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001L10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181947 ID=CN181947; Name=CN181947; organism=Citrus sinensis; type=EST; length=581bp
GAAAACAATAAAATTAAAAAAGCAGAAGAAGAGATTATACTCCGTAGTTA
AGTACGCAACAAAATGCTGGGAATTCAAATGCCTCCCTCGAAATTCTTCA
TGCTGTTTCTGTTTGTGATCTATCTTTCAATAAGCTTCCAATCCAGTTTT
ACAGCTGCAGCTGACCCAACATACGCTTATCATGTATGCTCAGCAAATTT
CACCGGAAACAGCACCTATCAAACTAACCGCAATCTTCTGCTATCTTCGC
TTCCCACAAACGCCAGCCGAGGCAATGGATACTCCAGCGGTTTCTACAAC
GAAACCACCGGTCAAGACCCTAACAAGGTCTATGGCCTCTTTCTCTGCCG
CGGGGATCAAACTGCCAGCAGCTGCCAAGACTGTGTCACTTTTGCCACCA
GAGATTTAGTTCAGCGTTGCCCAGATGGCAAACAAACCATAATATGGTAC
GATCAGTGCCTTTTGCGTTATTCAAATCGGTCTATCTTTTCAACCATGGA
CACAGTGCCCTATGTCTCTTTGTTGAATACACAAAATGTTACGGACCGAG
GCAGATTTAACCAGATTTTGGCGTCTTTGAT
back to top