CN181947

Overview
NameCN181947
Unique NameCN181947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12140 contig Csv1_Contig12140:12..592. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRR29_ARATH (Cysteine-rich repeat secretory protein 29 OS=Arabidopsis thaliana GN=CRRSP29 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.021e-20
Identity = 54/139 (38.85%), Postives = 79/139 (56.83%), Query Frame = 1
Query:  172 YAYHVCS---ANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFNQILASL 579
            Y +H CS     +   S ++ N NL+LS++    S GN +  GF     G+DPN V+ +F CRGD   S C  C++ A   L +RCP  K  IIWYDQCLL+ S+ + F+ +D      L N +N++DR  FN+  ++L
Sbjct:   33 YLHHKCSNTQGKYKQGSAFEKNLNLVLSTI---TSIGN-FRDGFRYTEEGEDPNNVFVMFQCRGDSYWSKCPPCISTAVSGLRRRCPRNKGAIIWYDQCLLKISSVASFNKIDYENDFYLSNPKNMSDRELFNKETSAL 167          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRR8_ARATH (Cysteine-rich repeat secretory protein 8 OS=Arabidopsis thaliana GN=CRRSP8 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.170e-19
Identity = 57/145 (39.31%), Postives = 81/145 (55.86%), Query Frame = 1
Query:   94 FFMLFLFVIYLSISFQSSFTAAADPTYAYHVCSANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQ--RCPDGKQTIIWYDQCLLRYSNRSIFSTMD-TVPYVS 519
            F   FLF ++   S Q+        T+     S NFT  S+Y+ NR  LLSSL   +S G      + N T G  P+ VYG+FLCRGD T +SC DCV  AT ++ +   C   K  +I+Y++C++RYSN S F+ ++   PYV+
Sbjct:   12 FCFFFLFSLF---SHQTMSQPQHMATFCDDRLSDNFTQTSSYKANRETLLSSLRDRSSLGT-----YSNATIGLSPDTVYGMFLCRGDLTKTSCSDCVKTATLEITKNNNCTSRKTALIFYEECMVRYSNVSFFTLVELDGPYVA 148          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRR5_ARATH (Putative cysteine-rich repeat secretory protein 5 OS=Arabidopsis thaliana GN=CRRSP5 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.904e-19
Identity = 51/151 (33.77%), Postives = 81/151 (53.64%), Query Frame = 1
Query:  112 FVIYLSISFQSSFTAAADPTYAYHVCSA--NFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRF 558
            F + L   F  S  A +  +     C+   N T  S+Y +NR+ +LS+L   +S G+     + N T G  PN +YG+FLCRGD   +SC DCV   T ++ + C   K  ++  ++C++RYSN S F+ ++ VP  +  +T N  D  +F
Sbjct:    8 FAVALFCFFSFSLRAMSQASQMLIDCTQFDNVTRTSSYLSNRDTVLSTLRNRSSIGS-----YSNATAGLSPNTIYGMFLCRGDLNRTSCSDCVNATTLEIYKSCFYRKSALVISNECIVRYSNVSFFTLVEDVPSTARFSTGNSLDSPQF 153          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRR57_ARATH (Cysteine-rich repeat secretory protein 57 OS=Arabidopsis thaliana GN=CRRSP57 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.904e-19
Identity = 45/107 (42.06%), Postives = 67/107 (62.62%), Query Frame = 1
Query:  190 SANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVP 510
            S NFT N+TY TN N LLS+L   +S  N     +YN TTG   + V+G+FLC GD   ++C  CV  AT ++ + C + ++ II+Y  C++RYS++   ST++T P
Sbjct:   38 SGNFTRNTTYNTNLNTLLSTLSNQSSFAN-----YYNLTTGLGSDTVHGMFLCIGDVNRTTCNACVKNATIEIAKNCTNHREAIIYYFSCMVRYSDKFFLSTLETKP 139          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.689e-18
Identity = 59/157 (37.58%), Postives = 81/157 (51.59%), Query Frame = 1
Query:   91 KFFMLFLFVIYLSISFQSSFTAAADPTYAYHVC---SANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIW---YDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVT 543
            KF ++F FV+ +S S  S+            VC   S  FT NSTY  NR +LLSSLP N +       GFY    G+ PN+ YGL +C     A SC DC+  A   L+Q C +  + I+W      CL+RYSNRS +S++     + +L + N T
Sbjct:    3 KFLVIFWFVV-ISFSHVSA-----------QVCLERSGFFTPNSTYDLNRRVLLSSLPLNVTA----IDGFYTTWIGEHPNRAYGLGMCVPGTDAHSCSDCIILANARLLQNCTNQTEAIVWRIDRTVCLVRYSNRSFYSSLG----MEILRSDNYT 139          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRR61_ARATH (Putative cysteine-rich repeat secretory protein 61 OS=Arabidopsis thaliana GN=CRRSP61 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.764e-18
Identity = 54/165 (32.73%), Postives = 82/165 (49.70%), Query Frame = 1
Query:   79 MPPSKFFMLFLFVIYLSISFQSSFTAAADP-TYAYHVCS---ANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFN 561
            +P     +L L ++ + + F  S ++  +  +Y YH CS     +   S Y+ N N L     TN    + +  GF     G DPN VY L  CRGD   S C  C++ AT +L +RCP  K  I+W+D+CLL+ S  + F  +D      + +T+ V+D   FN
Sbjct:    6 IPKRIALVLNLAMVAIQVFFIRSVSSMNETNSYLYHKCSEAEGKYKSKSPYEGNLNFL-----TNDMYKDTFVRGFVYAYHGDDPNTVYILLQCRGDSYGSKCGSCLSTATSELRRRCPMNKAGIVWFDKCLLKISPTAFFEKIDDKNKFYMYSTKKVSDPALFN 165          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRR27_ARATH (Putative cysteine-rich repeat secretory protein 27 OS=Arabidopsis thaliana GN=CRRSP27 PE=5 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 2.440e-17
Identity = 46/139 (33.09%), Postives = 74/139 (53.24%), Query Frame = 1
Query:  172 YAYHVCS---ANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFNQILASL 579
            Y +H C+     ++  S ++   NL L ++ ++      Y +GF     G+DPNKV+ ++ CRGD   S C+ C++ A   L +RCP  K  +IWYDQCL   S  + F+ +D      L N  +V D+  FN+  ++L
Sbjct:   33 YLHHKCNNTEGKYSHGSAFEKYINLALRAIDSD-----NYLNGFAYIERGEDPNKVFVMYQCRGDSYGSKCKSCISAAISGLRRRCPKSKGAVIWYDQCLFEISTINSFNKIDYENDFYLSNPNDVNDKELFNKETSAL 166          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.440e-17
Identity = 52/166 (31.33%), Postives = 88/166 (53.01%), Query Frame = 1
Query:  100 MLFLFVIYLSISFQSSFTAAA----DPTYAYHVCSANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPN-KVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVT-DRGRFNQILASL 579
            ++F F  +L+++   +F        DP +   V   NFT NST+  N N L+SSL +  S+    + GFYN ++G     + Y + LCR +     C  C+  A R+L ++CP  KQ ++WY  C+ RYSNR+I+   +T P  + +  + ++ +R  F ++   L
Sbjct:    6 VIFFFACFLTLAPFHAFAQVDSYEFDPDFNC-VDRGNFTANSTFAGNLNRLVSSLSSLKSQ----AYGFYNLSSGDSSGERAYAIGLCRREVKRDDCVSCIQTAARNLTKQCPLTKQAVVWYTHCMFRYSNRTIYGRKETNPTKAFIAGEEISANRDDFERLQRGL 166          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRR28_ARATH (Putative cysteine-rich repeat secretory protein 28 OS=Arabidopsis thaliana GN=CRRSP28 PE=5 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 4.161e-17
Identity = 48/139 (34.53%), Postives = 73/139 (52.52%), Query Frame = 1
Query:  172 YAYHVCSAN---FTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQNVTDRGRFNQILASL 579
            Y +H C+     +   S ++ N N+ L ++  N      + +GF     G+DPN V+ ++ CRGD   S+C+ CVT A   L +RCP  K  IIWYDQCL   S    +  +D      L N +NV++R  FN+  ++L
Sbjct:   33 YLHHKCNNTQGIYKRGSAFEKNLNIALRTVIFNGD----FRTGFRYGDVGEDPNTVFVMYQCRGDSYWSNCRTCVTTALSGLRKRCPGNKGAIIWYDQCLFEISTVDSYHKIDYENDFYLSNPKNVSNRELFNRETSAL 167          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRR59_ARATH (Cysteine-rich repeat secretory protein 59 OS=Arabidopsis thaliana GN=CRRSP59 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.435e-17
Identity = 43/107 (40.19%), Postives = 64/107 (59.81%), Query Frame = 1
Query:  190 SANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVP 510
            S N TGN+TY  N N +LS+    +S  N Y     N TTG   + VYG+FLC GD   ++C +CV  AT ++V+ C + ++ II+Y  C++RYS++   ST +  P
Sbjct:   41 SRNTTGNTTYNKNLNTMLSTFRNQSSIVNNY-----NLTTGLASDTVYGMFLCTGDVNITTCNNCVKNATIEIVKNCTNHREAIIYYIDCMVRYSDKFFLSTFEKKP 142          
The following BLAST results are available for this feature:
BLAST of CN181947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CRR29_ARATH4.021e-2038.85Cysteine-rich repeat secretory protein 29 OS=Arabi... [more]
CRR8_ARATH1.170e-1939.31Cysteine-rich repeat secretory protein 8 OS=Arabid... [more]
CRR5_ARATH9.904e-1933.77Putative cysteine-rich repeat secretory protein 5 ... [more]
CRR57_ARATH9.904e-1942.06Cysteine-rich repeat secretory protein 57 OS=Arabi... [more]
CRK24_ARATH1.689e-1837.58Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
CRR61_ARATH3.764e-1832.73Putative cysteine-rich repeat secretory protein 61... [more]
CRR27_ARATH2.440e-1733.09Putative cysteine-rich repeat secretory protein 27... [more]
CRK29_ARATH2.440e-1731.33Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRR28_ARATH4.161e-1734.53Putative cysteine-rich repeat secretory protein 28... [more]
CRR59_ARATH5.435e-1740.19Cysteine-rich repeat secretory protein 59 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001L10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001L10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181947 ID=CN181947; Name=CN181947; organism=Citrus sinensis; type=EST; length=581bp
GAAAACAATAAAATTAAAAAAGCAGAAGAAGAGATTATACTCCGTAGTTA
AGTACGCAACAAAATGCTGGGAATTCAAATGCCTCCCTCGAAATTCTTCA
TGCTGTTTCTGTTTGTGATCTATCTTTCAATAAGCTTCCAATCCAGTTTT
ACAGCTGCAGCTGACCCAACATACGCTTATCATGTATGCTCAGCAAATTT
CACCGGAAACAGCACCTATCAAACTAACCGCAATCTTCTGCTATCTTCGC
TTCCCACAAACGCCAGCCGAGGCAATGGATACTCCAGCGGTTTCTACAAC
GAAACCACCGGTCAAGACCCTAACAAGGTCTATGGCCTCTTTCTCTGCCG
CGGGGATCAAACTGCCAGCAGCTGCCAAGACTGTGTCACTTTTGCCACCA
GAGATTTAGTTCAGCGTTGCCCAGATGGCAAACAAACCATAATATGGTAC
GATCAGTGCCTTTTGCGTTATTCAAATCGGTCTATCTTTTCAACCATGGA
CACAGTGCCCTATGTCTCTTTGTTGAATACACAAAATGTTACGGACCGAG
GCAGATTTAACCAGATTTTGGCGTCTTTGAT
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