CN181947

Overview
NameCN181947
Unique NameCN181947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12140 contig Csv1_Contig12140:12..592. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRR14_ARATH (Putative cysteine-rich repeat secretory protein 14 OS=Arabidopsis thaliana GN=CRRSP14 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.532e-11
Identity = 42/108 (38.89%), Postives = 53/108 (49.07%), Query Frame = 1
Query:  172 YAYHVCSANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGF-YNETTGQDPN---KVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRS 483
            Y YH CSAN          +  L S +   +     +  GF Y + T  DPN   +VY  F CRGD   S C+ C   A  +L +RCP  K  IIWYDQC L +S+ S
Sbjct:   37 YLYHKCSANQGEYKLGSLYKKSLDSGIQQLSKDNEVFRGGFVYMDHT--DPNGTLRVYITFQCRGDIYGSHCRSCFATARAELFKRCPRDKAAIIWYDQCFLEFSSIS 142          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRR19_ARATH (Putative cysteine-rich repeat secretory protein 19 OS=Arabidopsis thaliana GN=CRRSP19 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.612e-11
Identity = 34/107 (31.78%), Postives = 57/107 (53.27%), Query Frame = 1
Query:  169 TYAYHVCSAN---FTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLV-QRCPDGKQTIIWYDQCLLRYSN 477
            +Y +H C  N   +   S Y+ + + ++ S         G+ +G+  +  G++P+ V   + CR D     CQ CV  A  +L+ +RCP  K+ IIWYDQCL+ +S+
Sbjct:   38 SYLHHKCVVNQGKYKPGSKYEKSLDDIIQSFSNKDKDSYGFRTGYSMKAYGKEPDMVSITYQCRIDSRGPKCQSCVVTAGYELLRKRCPRYKEAIIWYDQCLVEFSS 144          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRR18_ARATH (Cysteine-rich repeat secretory protein 18 OS=Arabidopsis thaliana GN=CRRSP18 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.612e-11
Identity = 34/107 (31.78%), Postives = 57/107 (53.27%), Query Frame = 1
Query:  169 TYAYHVCSAN---FTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLV-QRCPDGKQTIIWYDQCLLRYSN 477
            +Y +H C  N   +   S Y+ + + ++ S         G+ +G+  +  G++P+ V   + CR D     CQ CV  A  +L+ +RCP  K+ IIWYDQCL+ +S+
Sbjct:   38 SYLHHKCVVNQGKYKPGSKYEKSLDDIIQSFSNKDKDSYGFRTGYSMKAYGKEPDMVSITYQCRIDSRGPKCQSCVVTAGYELLRKRCPRYKEAIIWYDQCLVEFSS 144          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRR32_ARATH (Putative cysteine-rich repeat secretory protein 32 OS=Arabidopsis thaliana GN=CRRSP32 PE=5 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 3.412e-11
Identity = 51/162 (31.48%), Postives = 71/162 (43.83%), Query Frame = 1
Query:   94 FFMLFLFVIYLSISFQSSFTAAADPTYAYHVC---SANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSN-RSIFSTMDTVPYVSLLNTQNVT-DRGRFNQ 564
            F++L + V+  S+S Q+   A     Y +H C      +   S Y+ N N L+  +     R        +  + G+ PN    +F CRGD   S C  C   A   L +RC   K  IIWYDQC L+ S   S  + MD     S+ N  N+  D   FNQ
Sbjct:   14 FYILGIQVLIHSVSSQNLTNA-----YLHHKCLTRQGKYKPRSPYEENLNYLIDHISKYHFRDG------FRHSAGEAPNSGNFVFQCRGDSYGSICGSCYATAVAGLRKRCQRYKGAIIWYDQCFLKVSTINSPPTKMDYENTFSMHNPNNINGDTQLFNQ 164          
BLAST of CN181947 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.927e-11
Identity = 47/152 (30.92%), Postives = 66/152 (43.42%), Query Frame = 1
Query:   55 RNKMLGIQMPPSKFFMLFLFVIYLSISFQSSFTAAADPTYAYHVCSANFTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASSCQDCVTFATRDLVQRCPDGKQTIIWY---DQCLLRYSNRSIFSTMD 501
            +NKM+ ++        +F FV+  S        A A PT      S  F  N  Y  N   +LSSLP+        + GFY       PN  +GL +C    T   C DC+T  +  L+  CP+  + I W      CL+RYSN  I  ++D
Sbjct:    3 KNKMVDLRA-------IFWFVVISSC-------AVAAPTCIQR--SDFFKANGPYDINLRAMLSSLPSRVKD----NEGFYKTPFKPGPNIAHGLGMCSRGTTTQDCSDCITSVSHTLLHTCPNQAEAIDWSSGDSLCLVRYSNHLINGSLD 134          
The following BLAST results are available for this feature:
BLAST of CN181947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CRR14_ARATH1.532e-1138.89Putative cysteine-rich repeat secretory protein 14... [more]
CRR19_ARATH2.612e-1131.78Putative cysteine-rich repeat secretory protein 19... [more]
CRR18_ARATH2.612e-1131.78Cysteine-rich repeat secretory protein 18 OS=Arabi... [more]
CRR32_ARATH3.412e-1131.48Putative cysteine-rich repeat secretory protein 32... [more]
CRK21_ARATH9.927e-1130.92Cysteine-rich receptor-like protein kinase 21 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001L10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001L10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181947 ID=CN181947; Name=CN181947; organism=Citrus sinensis; type=EST; length=581bp
GAAAACAATAAAATTAAAAAAGCAGAAGAAGAGATTATACTCCGTAGTTA
AGTACGCAACAAAATGCTGGGAATTCAAATGCCTCCCTCGAAATTCTTCA
TGCTGTTTCTGTTTGTGATCTATCTTTCAATAAGCTTCCAATCCAGTTTT
ACAGCTGCAGCTGACCCAACATACGCTTATCATGTATGCTCAGCAAATTT
CACCGGAAACAGCACCTATCAAACTAACCGCAATCTTCTGCTATCTTCGC
TTCCCACAAACGCCAGCCGAGGCAATGGATACTCCAGCGGTTTCTACAAC
GAAACCACCGGTCAAGACCCTAACAAGGTCTATGGCCTCTTTCTCTGCCG
CGGGGATCAAACTGCCAGCAGCTGCCAAGACTGTGTCACTTTTGCCACCA
GAGATTTAGTTCAGCGTTGCCCAGATGGCAAACAAACCATAATATGGTAC
GATCAGTGCCTTTTGCGTTATTCAAATCGGTCTATCTTTTCAACCATGGA
CACAGTGCCCTATGTCTCTTTGTTGAATACACAAAATGTTACGGACCGAG
GCAGATTTAACCAGATTTTGGCGTCTTTGAT
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