CN181946

Overview
NameCN181946
Unique NameCN181946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length669
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181946 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.357e-31
Identity = 70/148 (47.30%), Postives = 100/148 (67.57%), Query Frame = -1
Query:  232 KSDVYSFGVLVLEIITGKKNSSFYQTDGAAD-LLSYAWKHWRDGTPLQLLDSNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTLPSPQHPAFFIGSRTERD-LPTKEFECSDKSTSKSIPWSVDEASITEVYPR 669
            KSDVYSFGVL+LEII GKKN SFYQ D  A+ L++Y W+ W +G+PL+L+D  ++++    EVIRCI + LLCVQEDP +RP+++TI++ML + S+ L  PQ P FF+    ERD   + +F     S +K      ++ +IT + PR
Sbjct:  549 KSDVYSFGVLILEIICGKKNRSFYQADTKAENLVTYVWRLWTNGSPLELVDLTISENCQTEEVIRCIHIALLCVQEDPKDRPNLSTIMMMLTNSSLILSVPQPPGFFVPQNKERDSFLSSQFTMGCTSQTK------NDVTITNLDPR 690          
BLAST of CN181946 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.024e-31
Identity = 74/148 (50.00%), Postives = 95/148 (64.19%), Query Frame = -1
Query:  232 KSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYAWKHWRDGTPLQLLDSNL--TDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTLPSPQHPAFFIGSRTERDLPTKEFECSDKSTSKSIPWSVDEASITEVYPR 669
            K+DVYSFGVLVLEII+GKKNS F   D   DL+S+AW++W++G  L L+D  L    SYS N ++RCI +GLLCVQE  AERPSMA++VLML+ +++ L  P  PAFF  S    D        S  S   +   S +  S TE+YPR
Sbjct:  527 KTDVYSFGVLVLEIISGKKNSGFSSEDSMGDLISFAWRNWKEGVALNLVDKILMTMSSYSSNMIMRCINIGLLCVQEKVAERPSMASVVLMLDGHTIALSEPSKPAFFSHSNAVSD--------SSSSLGHNAKTS-NYNSNTELYPR 665          
BLAST of CN181946 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.960e-30
Identity = 74/147 (50.34%), Postives = 101/147 (68.71%), Query Frame = -1
Query:  232 KSDVYSFGVLVLEIITGKKNSSFYQTDGA-ADLLSYAWKHWRDGTPLQLLDSNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTLPSPQHPAFFIGSRTERDLPTKEFECSDKSTSKSIPWSVDEASITEVYPR 669
            KSDVYSFGVL+LEII GKKNSS  +TDG+ ++L++Y W+ W +   L+L+D+ + ++Y RNEVIRCI +GLLCVQE+PA+RP+M+T+  ML + S+TL  PQ P F    R + + P  +      STS S   SV   S+T V PR
Sbjct:  494 KSDVYSFGVLILEIIGGKKNSSINETDGSISNLVTYVWRLWNNEPLLELVDAPMGENYDRNEVIRCIHIGLLCVQENPADRPTMSTVFHMLTNTSITLHVPQPPGFVFRVRFKPN-PLADRLQRGPSTSMSFSCSV---SVTCVSPR 636          
BLAST of CN181946 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 7.447e-30
Identity = 71/137 (51.82%), Postives = 94/137 (68.61%), Query Frame = -1
Query:  268 KSDVYSFGVLVLEIITGKKNSSFYQTDG---AADLLSYAWKHWRDGTPLQLLDSNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTLPSPQHPAFFIGSRTERDLPTKEFECSDKSTSKSIPWS 669
            KSD+YSFGVLVLEII+GKKNS  YQ D    A +L++YA + WR+ +PL+L+D     +Y  NEV RCI + LLCVQE+P +RP ++TI+LML S ++TLP P+ P FF  SR  +     E   SD+ TSKS  +S
Sbjct:  532 KSDIYSFGVLVLEIISGKKNSGVYQMDETSTAGNLVTYASRLWRNKSPLELVDPTFGRNYQSNEVTRCIHIALLCVQENPEDRPMLSTIILMLTSNTITLPVPRLPGFFPRSRQLK--LVSEGSESDQYTSKSSSFS 666          
BLAST of CN181946 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.270e-29
Identity = 70/148 (47.30%), Postives = 102/148 (68.92%), Query Frame = -1
Query:  232 KSDVYSFGVLVLEIITGKKNSSFYQT--DGAADLLSYAWKHWRDGTPLQLLDSNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTLPSPQHPAFFIGSRTERDLPTKEFECSDKSTSKSIPWSVDEASITEVYPR 669
            K+DV+SFGVLV+EIITGK+N++      + A DLLS+ W+ WR+ T L ++D +LT   SRNE++RCI +GLLCVQE  A RP+MAT+ LMLNSYS TLP+P  PAF + S     +P+     +  S+++ +  S ++ +++E  PR
Sbjct:  541 KTDVFSFGVLVIEIITGKRNNNGGSNGDEDAEDLLSWVWRSWREDTILSVIDPSLTAG-SRNEILRCIHIGLLCVQESAATRPTMATVSLMLNSYSFTLPTPLRPAFVLESVV---IPS-----NVSSSTEGLQMSSNDVTVSEFSPR 679          
BLAST of CN181946 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.234e-29
Identity = 67/147 (45.58%), Postives = 93/147 (63.27%), Query Frame = -1
Query:  232 KSDVYSFGVLVLEIITGKKNSSFYQTDGA-ADLLSYAWKHWRDGTPLQLLDSNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTLPSPQHPAFFIGSRTERDLPTKEFECSDKSTSKSIPWSVDEASITEVYPR 669
            KSDVYSFGVLV EII+G KNSS YQ D + ++L++Y W+ W +G+ L L+D +  D+Y  +++ RCI + LLCVQED  +RP+M+ IV ML + S+ L  P+ P FF   R E      +      S  +    S+D+ASIT V PR
Sbjct:  690 KSDVYSFGVLVFEIISGMKNSSLYQMDDSVSNLVTYTWRLWSNGSQLDLVDPSFGDNYQTHDITRCIHIALLCVQEDVDDRPNMSAIVQMLTTSSIVLAVPKQPGFFFRGRHE------QVGEVGSSVDRLALCSIDDASITSVAPR 830          
BLAST of CN181946 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 1.834e-28
Identity = 67/148 (45.27%), Postives = 101/148 (68.24%), Query Frame = -1
Query:  232 KSDVYSFGVLVLEIITGKKNSSFYQTDG--AADLLSYAWKHWRDGTPLQLLDSNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTLPSPQHPAFFIGSRTERDLPTKEFECSDKSTSKSIPWSVDEASITEVYPR 669
            K+DV+SFGVLV+EIITGK N++    D   A +LLS+ W+ WR+   L ++D +LT   SR+E++RCI +GLLCVQE PA RP+M ++ LMLNSYS TLP+P  PAF +    E  +P+        S+++ +  S+++ +++E+ PR
Sbjct:  545 KTDVFSFGVLVIEIITGKGNNNGRSNDDEEAENLLSWVWRCWREDIILSVIDPSLTTG-SRSEILRCIHIGLLCVQESPASRPTMDSVALMLNSYSYTLPTPSRPAFAL----ESVMPSMNV----SSSTEPLLMSLNDVTVSELSPR 683          
BLAST of CN181946 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.129e-28
Identity = 66/149 (44.30%), Postives = 97/149 (65.10%), Query Frame = -1
Query:  232 KSDVYSFGVLVLEIITGKKNSSFYQTDGAAD-LLSYAWKHWRDGTPLQLLDSNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTLPSPQHPAFF--IGSRTERDLPTKEFECSDKSTSKSIPWSVDEASITEVYPR 669
            +SDVYSFGVLVLEII G+ N   +Q+D   + L++YAW+ WR+ +PL+L+D  ++++    EV RCI + LLCVQ +P +RPS++TI +ML + S  LP PQ P FF  I S  ERD           S ++S P ++++ +IT+  PR
Sbjct:  518 RSDVYSFGVLVLEIICGRNNRFIHQSDTTVENLVTYAWRLWRNDSPLELVDPTISENCETEEVTRCIHIALLCVQHNPTDRPSLSTINMMLINNSYVLPDPQQPGFFFPIISNQERD--------GLDSMNRSNPQTINDVTITDFEPR 658          
BLAST of CN181946 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.007e-26
Identity = 57/109 (52.29%), Postives = 80/109 (73.39%), Query Frame = -1
Query:  346 KSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYAWKHWRDGTPLQLLDSNLTDSYS-RNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTLPSPQHPAFFIG 669
            K+DV+SFGVLVLEII GKKN+   + D +  LLSY WK WR+G  L ++D +L ++    +E+++CI +GLLCVQE+   RP+MA++V+MLN+ S TLP P  PAF+ G
Sbjct:  528 KTDVFSFGVLVLEIIKGKKNNWSPEEDSSLFLLSYVWKSWREGEVLNIVDPSLVETIGVSDEIMKCIHIGLLCVQENAESRPTMASVVVMLNANSFTLPRPSQPAFYSG 636          
BLAST of CN181946 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.242e-26
Identity = 56/110 (50.91%), Postives = 77/110 (70.00%), Query Frame = -1
Query:  340 KSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYAWKHWRDGTPLQLLDSNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTLPSPQHPAFFIGSR 669
            KSDVYS+GVLVLEII GK+N+SF  +    + ++Y W+ W+ GTPL L+D+ + ++Y   EVIRCI + LLCVQE+P +RP  + I+ ML S S+ LP P+ P  FI  R
Sbjct:  540 KSDVYSYGVLVLEIICGKRNTSF--SSPVQNFVTYVWRLWKSGTPLNLVDATIAENYKSEEVIRCIHIALLCVQEEPTDRPDFSIIMSMLTSNSLILPVPKPPPSFIPGR 647          
The following BLAST results are available for this feature:
BLAST of CN181946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
CRK12_ARATH1.357e-3147.30Putative cysteine-rich receptor-like protein kinas... [more]
CRK26_ARATH3.024e-3150.00Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRK24_ARATH1.960e-3050.34Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
CRK11_ARATH7.447e-3051.82Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
CRK29_ARATH1.270e-2947.30Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRK23_ARATH8.234e-2945.58Putative cysteine-rich receptor-like protein kinas... [more]
CRK28_ARATH1.834e-2845.27Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
CRK14_ARATH3.129e-2844.30Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
CRK41_ARATH1.007e-2652.29Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK13_ARATH2.242e-2650.91Cysteine-rich receptor-like protein kinase 13 OS=A... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0001L10_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001L10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181946 ID=CN181946; Name=CN181946; organism=Citrus sinensis; type=EST; length=669bp
TTTGATATCCCACGTTGTATCTTTACTCACACATACCATATTCATATACT
TCAACGAATAAAAACTTTGGATAAAGCAACGCGGCATAATTCAATTCGAA
GGGCACCTCCTCTTTTTCATTATTGCTTGTCGTAAACCATGCCATTCTCC
CCCATACCGTACCAGCCCTGCCCCTCGGTAGATCATATACTAACATAAAG
AAGAAGCATCATTAACAGTTCTTACAAGTTAACGGGGGTATACTTCAGTA
ATTGACGCTTCATCAACAGACCATGGAATCGACTTGCTTGTAGATTTATC
AGAGCACTCAAATTCTTTTGTGGGCAAGTCCCTCTCAGTTCGACTGCCTA
TGAAAAATGCAGGATGTTGAGGCGACGGAAGTGTGACAGAGTAACTATTG
AGCATGAGAACTATTGTTGCCATTGATGGCCTCTCAGCTGGATCTTCCTG
GACGCATAATAAGCCCAATTGGATGCATCTAATCACTTCATTTCTTGAGT
AAGAATCTGTCAGATTTGAATCCAGCAACTGCAAAGGTGTTCCATCCCTC
CAATGTTTCCAAGCATAGCTCAAAAGATCTGCAGCACCATCTGTTTGATA
AAAGCTGCTGTTCTTCTTGCCAGTTATAATCTCCAGGACGAGGACACCAA
AACTATATACATCTGATTT
back to top