CN181936

Overview
NameCN181936
Unique NameCN181936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length669
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: HSP70_HYDMA (Heat shock 70 kDa protein OS=Hydra magnipapillata GN=HSP70.1 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.785e-53
Identity = 97/152 (63.82%), Postives = 121/152 (79.61%), Query Frame = -2
Query:  213 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGGDAG 668
            PRGVPQI V FD+DANGILNVSA DK+TG++NKITITNDKGRLSKE+IE+MVQEAEKYKA+D+  + KV+AKN LE+Y YNM+ T++DEK+  K+   DKK I     + ++W+D NQ AE D++E K KELE +CNPII K+YQ GGG  G
Sbjct:  475 PRGVPQIEVTFDVDANGILNVSALDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKADDELQRDKVQAKNSLESYCYNMKQTVEDEKVKGKISEEDKKTIIKKCNETVEWVDKNQTAEKDQYEHKQKELEKVCNPIITKLYQAGGGMPG 626          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 4.750e-53
Identity = 95/152 (62.50%), Postives = 126/152 (82.89%), Query Frame = -2
Query:  213 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGGDAG 668
            PRGVPQI V FDIDANGILNVSA DK+TG++NKITIT DKGRLSKEEIE+MV +AEK+K ED++ + +V AKNGLE+YA++M++T++DEK+  K+  +D+++I +  E+ ++WLDGNQ AE +E+E + KELE +CNPIIAKMYQ  GG  G
Sbjct:  470 PRGVPQIEVTFDIDANGILNVSAVDKSTGKQNKITITRDKGRLSKEEIERMVNDAEKFKQEDEKQRDRVAAKNGLESYAFSMKSTVEDEKVKEKIGESDRRRIMEKCEETVKWLDGNQQAEKEEYEHRQKELESVCNPIIAKMYQEAGGVGG 621          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: HSP7D_MANSE (Heat shock 70 kDa protein cognate 4 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.058e-52
Identity = 97/152 (63.82%), Postives = 123/152 (80.92%), Query Frame = -2
Query:  213 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGGDAG 668
            PRGVPQI V FDIDANGILNVSA +K+T ++NKITITNDKGRLSKEEIE+MV EAEKY+ ED++ K+ ++AKN LE+Y +NM++T++DEK+  K+  +DK+ I D     I+WLD NQLA+ +E+E K KELEGICNPII K+YQG GG  G
Sbjct:  468 PRGVPQIEVTFDIDANGILNVSAVEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDEKQKETIQAKNALESYCFNMKSTMEDEKLKDKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKLYQGAGGMPG 619          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.058e-52
Identity = 98/147 (66.67%), Postives = 120/147 (81.63%), Query Frame = -2
Query:  222 GVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGG 662
            GVPQI V F+IDANGILNV+A DK+TG+ NKITITNDKGRLSKEEIE+MVQEAEKYKAED+  +++V AKN LE+YA NM++ ++DE +  K+  ADKKK+ D  ++ I WLD N LAE DEFE K KELE +CNPII+ +YQGGGG
Sbjct:  467 GVPQIEVTFEIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYALNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQGGGG 613          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: HSP70_ONCMY (Heat shock cognate 70 kDa protein OS=Oncorhynchus mykiss GN=hsc71 PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.058e-52
Identity = 98/152 (64.47%), Postives = 120/152 (78.95%), Query Frame = -2
Query:  213 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGGDAG 668
            PRGVPQI V FDIDANGI+NVSA DK+TG++NKITITNDKGRLSKE+IE+MVQEAEKYK EDD  + KV +KN LE+YA+NM++T++DEK+  K+   DK KI +   + I WLD NQ AE +E+E   KELE +CNPII K+YQG GG  G
Sbjct:  468 PRGVPQIEVTFDIDANGIMNVSAADKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKCEDDVQRDKVSSKNSLESYAFNMKSTVEDEKLQGKISDEDKTKILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQGAGGMPG 619          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.805e-52
Identity = 94/157 (59.87%), Postives = 125/157 (79.62%), Query Frame = -2
Query:  198 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGGDAGASMDE 668
            PRGVPQI V FDIDANGILNVSA DK+TG++NKITITNDKGRLSKE+IE+MVQ+A+KYKAEDD  ++K+ AKN LE+YA+NM+++++D+ +  K+   DKKK+ D  +Q I WL+ NQL + +E+E ++KELE +C PII K+YQ GG   G   D+
Sbjct:  470 PRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQDADKYKAEDDAQREKIAAKNSLESYAFNMKSSVEDDNMKGKISQEDKKKVVDRCDQTISWLENNQLGDKEEYEHQLKELEKVCQPIITKLYQQGGMPTGCCGDQ 626          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.079e-52
Identity = 98/153 (64.05%), Postives = 125/153 (81.70%), Query Frame = -2
Query:  210 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGGDAGA 668
            PRGVPQI V FDIDANGILNVSA DK+TG++NKITITNDKGRLSK++I++MVQEAEKYKAED+ ++ +V AKN LE+Y YNM+ T++DEK+  K+   DK+K+ D  ++ I  LD NQ+AE +E+E K KELE +CNPI+ K+YQG GG AGA
Sbjct:  471 PRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKDDIDRMVQEAEKYKAEDEANRDRVGAKNSLESYTYNMKQTVEDEKLKGKISDQDKQKVLDKCQEVISSLDRNQMAEKEEYEHKQKELEKLCNPIVTKLYQGAGG-AGA 622          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.021e-52
Identity = 96/147 (65.31%), Postives = 120/147 (81.63%), Query Frame = -2
Query:  228 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGG 668
            PRGVPQI V FDIDANGILNV+A DK+TG+ NKITITNDKGRLSKEEIE+MV +AEKYKAED+  ++K+ AKN LE+YA+NM++ + DE +  K+  ADKKKI +   +A+ WL+ NQLAE DEF+ K +ELE +CNPII K+YQGG
Sbjct:  470 PRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSAVSDEGLKGKISDADKKKILNKCNEALSWLEANQLAEKDEFDHKRRELEQVCNPIITKLYQGG 616          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.252e-52
Identity = 98/153 (64.05%), Postives = 120/153 (78.43%), Query Frame = -2
Query:  198 PQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGGDAGASMDE 656
            PQI V FDIDANGI+NVSA DK+TG++NKITITNDKGRLSKE+IE+MVQEAEKYKAEDD  + KV AKNGLE+YA+NM++T++DEK++ K+   DK+KI D   + I WLD NQ AE DE+  + KELE +CNPII K+YQ  GG  G    E
Sbjct:  470 PQIEVTFDIDANGIMNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLAGKISDEDKQKILDKCNEVISWLDKNQTAERDEYVHQQKELEKVCNPIITKLYQSAGGMPGGCQRE 622          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: HS71L_MOUSE (Heat shock 70 kDa protein 1-like OS=Mus musculus GN=Hspa1l PE=2 SV=4)

HSP 1 Score: 203.756 bits (517), Expect = 6.859e-52
Identity = 96/147 (65.31%), Postives = 119/147 (80.95%), Query Frame = -2
Query:  228 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGG 668
            PRGVPQI V FDIDANGILNV+A DK+TG+ NKITITNDKGRLSKEEIE+MVQEAE+YKAED+  ++K+ AKN LE+YA+NM++ + DE +  K+  +DKKKI D   + + WL+ NQLAE DEF+ K KELE +CNPII K+YQ G
Sbjct:  470 PRGVPQIEVTFDIDANGILNVTAMDKSTGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEGQREKIAAKNALESYAFNMKSAVGDEGLKDKISESDKKKILDKCNEVLSWLEANQLAEKDEFDHKRKELENMCNPIITKLYQSG 616          
The following BLAST results are available for this feature:
BLAST of CN181936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_HYDMA2.785e-5363.82Heat shock 70 kDa protein OS=Hydra magnipapillata ... [more]
HSP70_ECHGR4.750e-5362.50Heat shock cognate 70 kDa protein OS=Echinococcus ... [more]
HSP7D_MANSE1.058e-5263.82Heat shock 70 kDa protein cognate 4 OS=Manduca sex... [more]
HSP71_CERAE1.058e-5266.67Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]
HSP70_ONCMY1.058e-5264.47Heat shock cognate 70 kDa protein OS=Oncorhynchus ... [more]
HSP70_ONCTS1.805e-5259.87Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HSP70_CHICK3.079e-5264.05Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HS71L_PIG4.021e-5265.31Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HSP7C_ORYLA5.252e-5264.05Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]
HS71L_MOUSE6.859e-5265.31Heat shock 70 kDa protein 1-like OS=Mus musculus G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001L05_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001L05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181936 ID=CN181936; Name=CN181936; organism=Citrus sinensis; type=EST; length=669bp
CCCTTTTTTAAACTAATATCTTTATGCAGACACCAGGAAACAGTTTTATA
TGTAACATAAGCAGGAAAAGGAAGAAAAGATCACACTCCCAACTCAACCC
CTAATCATTAACCAACATTAAGCATAAATCCTCAAATTTAATCCACCTCC
TCAATCTTGGGGCCAGCACCGCTACCAGCACCAGCAGAAGGACCATCCTC
ATCCATACTTGCACCAGCATCACCTCCACCTCCTTGGTACATCTTGGCAA
TAATTGGGTTGCAGATGCCCTCCAGCTCTTTCATCTTATCTTCAAACTCA
TCTGCCTCTGCGAGCTGGTTCCCGTCAAGCCATTGGATGGCCTGCTCAAT
GGCATCTTCAATTTTCTTCTTGTCAGCAGCAGGAAGCTTTGCGCTGATCT
TTTCATCCTTGATTGTGTTTCTCATGTTGTAAGCATAATTCTCAAGACCA
TTCTTCGCCTCCACCTTTTTCTTGTGCTCGTCATCCTCGGCCTTGTATTT
TTCTGCCTCTTGTACCATCTTCTCTATCTCCTCCTTAGAGAGTCTGCCCT
TGTCATTTGTGATGGTAATCTTATTCTTCTGTCCGGTGGTTTTGTCCTCA
GCAGAAACGTTCAAGATACCATTAGCATCAATGTCAAAGCACACATTGAT
TTGTGGAACCCCTCTTGGA
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