CN181936

Overview
NameCN181936
Unique NameCN181936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length669
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: DNAK_BACAA (Chaperone protein dnaK OS=Bacillus anthracis (strain A0248) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.181e-19
Identity = 58/152 (38.16%), Postives = 85/152 (55.92%), Query Frame = -2
Query:  213 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGGDAG 668
            PRG+PQI V FDIDANGI+NV A+D  T ++  ITI +  G LS EE+E+MVQEAE     D + K++VE +N  +   +     +KD  +  K+ AA+  K  +A E     ++ N+L   +E   K   L+ I   +  K+Y+     AG
Sbjct:  436 PRGIPQIEVTFDIDANGIVNVRAKDLGTSKEQAITIQSSSG-LSDEEVERMVQEAEANADADQKRKEEVELRNEADQLVFQTDKVVKD--LEGKVDAAEVAKATEAKEALQAAIEKNEL---EEIRAKKDALQEIVQQLTVKLYEQAQAAAG 581          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: DNAK_ACIC1 (Chaperone protein dnaK OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.181e-19
Identity = 56/155 (36.13%), Postives = 90/155 (58.06%), Query Frame = -2
Query:  207 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQL-AEADEFEDKMKELEGICNPIIAKMYQGGGGDAGAS 668
            PRGVPQI V FDIDANGI++VSA+D  TG++  +TIT     L KEEIE+M+++AE +  ED   +++ EA+N  +   Y     +++   + K+PAA+K  +E AI    + ++G+ + A     E    E + +   + A      GG +G++
Sbjct:  439 PRGVPQIEVTFDIDANGIVHVSAKDLATGKEQSMTITGGSA-LPKEEIERMMRDAEAHAEEDRRRREEAEARNQADTLIYQTEKFLREN--ADKVPAAEKANVETAIANLKKAMEGSDVTAIRSATEQLATESQKLGAAMYAATQAAAGGSSGSA 590          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: DNAK_VIBHB (Chaperone protein dnaK OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.542e-19
Identity = 64/163 (39.26%), Postives = 88/163 (53.99%), Query Frame = -2
Query:  195 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADE-----FEDKMKELEGICNPIIAKMYQGGGGDAGASMDED 668
            PRG+PQI V FD+DA+GIL+VSA+DK TG++ KITI    G LS E+IEKMVQEAE  K  D + ++   A+N  +   +  R  +  E+    LPA +K+KIE AI +      G+     D           K +E       A+  QG   DA  S ++D
Sbjct:  465 PRGMPQIEVTFDLDADGILHVSAKDKQTGKEQKITI-QASGGLSDEDIEKMVQEAEANKEADKKFEELAAARNQADQMIHGTRKQV--EEAGEALPAEEKEKIEAAISELETARKGDDKEAIDAKVQALMTAAQKLMEIAQQQAQAQQAQGADADAQQSKEDD 624          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: DNAK_POLNA (Chaperone protein dnaK OS=Polaromonas naphthalenivorans (strain CJ2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.542e-19
Identity = 68/160 (42.50%), Postives = 95/160 (59.38%), Query Frame = -2
Query:  207 RGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKK-VEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMY------QGGGGDAGAS 665
            RG PQI V FDIDANGIL+V A+DK TG++NKITI  + G L++ EI++MV++AE   AEDD+ K + V+AKN  E   ++++ ++ +     KL A +K KIE AI+   + L  +  A     E K   L      +  KMY      Q  GGDAGA+
Sbjct:  468 RGTPQIEVSFDIDANGILHVGAKDKGTGKENKITIKANSG-LTEAEIQQMVKDAE-LNAEDDKKKVEFVQAKNSAEAMVHSVKKSLGE--YGDKLDAGEKAKIEAAIKDMEEALKSDDKA---AIEAKNAALMEASQKLGEKMYADMQSSQAAGGDAGAA 620          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: DNAK_PELLD (Chaperone protein dnaK OS=Pelodictyon luteolum (strain DSM 273) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.542e-19
Identity = 53/153 (34.64%), Postives = 87/153 (56.86%), Query Frame = -2
Query:  210 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGGDAGA 668
            PRG+PQI V FDID+NGILNVSA+DK TG++  I I     +L+  E+EKM ++A+ +  ED + K+++E KN  ++  ++    + +  +  K+PA  K  IE A+E+     D ++    +  +  M EL  +   + + +YQ     A A
Sbjct:  459 PRGMPQIEVTFDIDSNGILNVSAKDKATGKEQSIKI-ESSSKLTDAEVEKMKEDAKVHAEEDQKRKEEIEVKNSADSLIFSTEKQLSE--LGEKIPADKKPVIEGALEKL---KDAHKNGTIESIKGAMDELSKVWGEVASNLYQAEAPGADA 605          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: DNAK_OLICO (Chaperone protein dnaK OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.542e-19
Identity = 61/159 (38.36%), Postives = 91/159 (57.23%), Query Frame = -2
Query:  195 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMY-QGGGGDAGASMDED 668
            PRG+PQI V FDIDANGI+NVSA+DK TG++ +I I    G LS+ EIEKMV+EAE   AED + ++ V+AKN  +   ++    + +    +K+   ++K IEDA+    + L G+   +++  + K   L      +   MY Q   GDA     +D
Sbjct:  461 PRGMPQIEVTFDIDANGIVNVSAKDKATGKEQQIRI-QASGGLSESEIEKMVKEAEANAAEDKKRREAVDAKNHADALVHSTEKALAEH--GSKVGEGERKAIEDALADLKEALKGD---DSEAIKAKSNTLAQASMKLGEAMYQQQAEGDAARDAAQD 613          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: DNAK_NEIMA (Chaperone protein dnaK OS=Neisseria meningitidis serogroup A GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.542e-19
Identity = 62/165 (37.58%), Postives = 95/165 (57.58%), Query Frame = -2
Query:  195 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEAD-------EFEDKMKELEGICNPIIAKMYQGGGGDAGASMDED 668
            PRG+PQI V FDIDANGIL+VSA+DK TG+   ITI    G LS+EEIE+MV++AE    ED +  + V ++N  E   ++++ ++ D     KL AA+K+KIE A+++A + + G+     D           K+ E+        A+  +G   ++ A  D+D
Sbjct:  467 PRGMPQIEVTFDIDANGILHVSAKDKGTGKAANITIQGSSG-LSEEEIERMVKDAEANAEEDKKLTELVASRNQAEALIHSVKKSLAD--YGDKLDAAEKEKIEAALKEAEEAVKGDDKTAIDAKAEALGTASQKLGEMVYAQAQAEAQAGEGAQAESSAKKDDD 628          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: DNAK_MYCUA (Chaperone protein dnaK OS=Mycobacterium ulcerans (strain Agy99) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.542e-19
Identity = 54/156 (34.62%), Postives = 89/156 (57.05%), Query Frame = -2
Query:  210 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKIS---AKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGGDAGA 668
            PRGV QI V FDIDANGI++V+A+DK TG++N I I    G LSK+EI++M+++AE + AED + +++ + +N  E   Y     +K+++ +   +K+P     K++ A+ +A   L G  +A      +K+ +        I +  Q     AGA
Sbjct:  440 PRGVSQIEVTFDIDANGIVHVTAKDKGTGKENTIRIQEGSG-LSKDEIDRMIKDAEAHAAEDHKRREEADVRNQAETLVYQTEKFVKEQREAEGGSKVPEDTLNKVDAAVAEAKSALAGTDIAAIKSAMEKLGQESQALGQAIYEATQADAAAAGA 594          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: DNAK_LEGPA (Chaperone protein dnaK OS=Legionella pneumophila (strain Paris) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.542e-19
Identity = 57/157 (36.31%), Postives = 89/157 (56.69%), Query Frame = -2
Query:  198 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGGDAGASMDE 668
            PRGVPQI V FDIDANGILNVSA+DK TG+   I I    G LS+EE+  MV++A+ +  ED + K+  E +N  ++  ++   ++KD  ++ +L   +KK IE AI +  + + G    +    EDK+K L      +  ++Y     +  A+  +
Sbjct:  466 PRGVPQIEVTFDIDANGILNVSAKDKATGKAQSIVIKASSG-LSEEEVAAMVKDAQSHAEEDKKFKEMAELRNQADSLIHSCEKSMKD--LADELSEDEKKGIETAISELKEAVQG---TDKTRIEDKLKVLTDASAKMAERIYAKKSSEGQAAQGQ 616          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: DNAK_LACS1 (Chaperone protein dnaK OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.542e-19
Identity = 60/163 (36.81%), Postives = 96/163 (58.90%), Query Frame = -2
Query:  207 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ---------GGGGDAGAS 668
            PRGVPQI V FDID NGI+NVSA+D  T ++ KITI +  G LS EEI++MV+EA++ +A D + K++V+ +N ++   +    T+K+  +  K+ A + K +EDA   A++     + ++ +E + K  EL  +   +  K+YQ         G  GD  A+
Sbjct:  437 PRGVPQIEVKFDIDKNGIVNVSAKDLGTNKEQKITIKSSSG-LSDEEIDRMVKEAKENEAADKKRKEEVDLRNEVDQLLFQTDKTLKE--VKDKVSADEVKSVEDA-RDALK--KAQEQSDINEMKAKKDELTKLIQDMSVKLYQQAQQAQQASGAQGDTSAN 593          
The following BLAST results are available for this feature:
BLAST of CN181936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BACAA1.181e-1938.16Chaperone protein dnaK OS=Bacillus anthracis (stra... [more]
DNAK_ACIC11.181e-1936.13Chaperone protein dnaK OS=Acidothermus cellulolyti... [more]
DNAK_VIBHB1.542e-1939.26Chaperone protein dnaK OS=Vibrio harveyi (strain A... [more]
DNAK_POLNA1.542e-1942.50Chaperone protein dnaK OS=Polaromonas naphthaleniv... [more]
DNAK_PELLD1.542e-1934.64Chaperone protein dnaK OS=Pelodictyon luteolum (st... [more]
DNAK_OLICO1.542e-1938.36Chaperone protein dnaK OS=Oligotropha carboxidovor... [more]
DNAK_NEIMA1.542e-1937.58Chaperone protein dnaK OS=Neisseria meningitidis s... [more]
DNAK_MYCUA1.542e-1934.62Chaperone protein dnaK OS=Mycobacterium ulcerans (... [more]
DNAK_LEGPA1.542e-1936.31Chaperone protein dnaK OS=Legionella pneumophila (... [more]
DNAK_LACS11.542e-1936.81Chaperone protein dnaK OS=Lactobacillus salivarius... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001L05_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001L05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181936 ID=CN181936; Name=CN181936; organism=Citrus sinensis; type=EST; length=669bp
CCCTTTTTTAAACTAATATCTTTATGCAGACACCAGGAAACAGTTTTATA
TGTAACATAAGCAGGAAAAGGAAGAAAAGATCACACTCCCAACTCAACCC
CTAATCATTAACCAACATTAAGCATAAATCCTCAAATTTAATCCACCTCC
TCAATCTTGGGGCCAGCACCGCTACCAGCACCAGCAGAAGGACCATCCTC
ATCCATACTTGCACCAGCATCACCTCCACCTCCTTGGTACATCTTGGCAA
TAATTGGGTTGCAGATGCCCTCCAGCTCTTTCATCTTATCTTCAAACTCA
TCTGCCTCTGCGAGCTGGTTCCCGTCAAGCCATTGGATGGCCTGCTCAAT
GGCATCTTCAATTTTCTTCTTGTCAGCAGCAGGAAGCTTTGCGCTGATCT
TTTCATCCTTGATTGTGTTTCTCATGTTGTAAGCATAATTCTCAAGACCA
TTCTTCGCCTCCACCTTTTTCTTGTGCTCGTCATCCTCGGCCTTGTATTT
TTCTGCCTCTTGTACCATCTTCTCTATCTCCTCCTTAGAGAGTCTGCCCT
TGTCATTTGTGATGGTAATCTTATTCTTCTGTCCGGTGGTTTTGTCCTCA
GCAGAAACGTTCAAGATACCATTAGCATCAATGTCAAAGCACACATTGAT
TTGTGGAACCCCTCTTGGA
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